RNA–Protein interactions for RNA: YER118C

SHO1, Transcript of Transmembrane osmosensor for filamentous growth and HOG pathways, yeastyeast

Gene SHO1, Length 1,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHO1YER118C GCY1P14065 312 aaKnown RBP RIP-Chip data5.72□□□□□ -1.49not detected
SHO1YER118C SEN2P16658 377 aa5.72□□□□□ -1.49
SHO1YER118C GLC7P32598 312 aaKnown RBP5.72□□□□□ -1.49
SHO1YER118C ELM1P32801 640 aa5.72□□□□□ -1.49
SHO1YER118C CAF4P36130 643 aa5.72□□□□□ -1.49
SHO1YER118C YCR087C-AP37263 153 aa5.72□□□□□ -1.49
SHO1YER118C HMT1P38074 348 aa5.72□□□□□ -1.49
SHO1YER118C AIM23P47015 356 aa5.72□□□□□ -1.49
SHO1YER118C IRC18P47056 224 aa5.72□□□□□ -1.49
SHO1YER118C MMS2P53152 137 aa5.72□□□□□ -1.49
SHO1YER118C POP6P53218 158 aa5.72□□□□□ -1.49
SHO1YER118C YLR152CP54072 576 aa5.72□□□□□ -1.49
SHO1YER118C YPL199CQ08954 240 aa5.72□□□□□ -1.49
SHO1YER118C YPL150WQ12152 901 aa5.72□□□□□ -1.49
SHO1YER118C RPS3P05750 240 aaKnown RBP5.71□□□□□ -1.5
SHO1YER118C SPT3P06844 337 aa5.71□□□□□ -1.5
SHO1YER118C SPS100P13130 326 aa5.71□□□□□ -1.5
SHO1YER118C ERD1P16151 362 aa5.71□□□□□ -1.5
SHO1YER118C PDC2P32896 925 aa5.71□□□□□ -1.5
SHO1YER118C DER1P38307 211 aa5.71□□□□□ -1.5
SHO1YER118C COG3P40094 801 aa5.71□□□□□ -1.5
SHO1YER118C RRT5P43607 289 aa5.71□□□□□ -1.5
SHO1YER118C AVT4P50944 713 aa5.71□□□□□ -1.5
SHO1YER118C YPS5P53057 165 aa5.71□□□□□ -1.5
SHO1YER118C YGL082WP53155 381 aa5.71□□□□□ -1.5
SHO1YER118C KIN4Q01919 800 aa5.71□□□□□ -1.5
SHO1YER118C YPR098CQ06089 161 aa5.71□□□□□ -1.5
SHO1YER118C YPR147CQ06522 304 aaKnown RBP5.71□□□□□ -1.5
SHO1YER118C YDL114WQ07530 308 aa5.71□□□□□ -1.5
SHO1YER118C RRS1Q08746 203 aaKnown RBP5.71□□□□□ -1.5
SHO1YER118C SLM3Q12093 417 aa5.71□□□□□ -1.5
SHO1YER118C YLR112WQ12130 139 aa5.71□□□□□ -1.5
SHO1YER118C PNS1Q12412 539 aa5.71□□□□□ -1.5
SHO1YER118C CBS2P14905 389 aa5.7□□□□□ -1.5
SHO1YER118C CTA1P15202 515 aa5.7□□□□□ -1.5
SHO1YER118C SAM2P19358 384 aaKnown RBP5.7□□□□□ -1.5
SHO1YER118C YAP1P19880 650 aaKnown RBP5.7□□□□□ -1.5
SHO1YER118C PMT2P31382 759 aa5.7□□□□□ -1.5
SHO1YER118C ANR2P36090 516 aaPredicted RBP5.7□□□□□ -1.5
SHO1YER118C GRE3P38715 327 aaKnown RBP RIP-Chip data5.7□□□□□ -1.5not detected
SHO1YER118C RSM25P40496 264 aa5.7□□□□□ -1.5
SHO1YER118C GAT1P43574 510 aa5.7□□□□□ -1.5
SHO1YER118C TRM9P49957 279 aa5.7□□□□□ -1.5
SHO1YER118C GOR1P53839 350 aa5.7□□□□□ -1.5
SHO1YER118C YMR181CQ03231 154 aa5.7□□□□□ -1.5
SHO1YER118C YPL119C-AQ3E751 87 aa5.7□□□□□ -1.5
SHO1YER118C YCR024C-BQ3E7Z8 88 aa5.7□□□□□ -1.5
SHO1YER118C CPT1P17898 393 aa5.69□□□□□ -1.5
SHO1YER118C GLN3P18494 730 aa5.69□□□□□ -1.5
SHO1YER118C INO2P26798 304 aa5.69□□□□□ -1.5
SHO1YER118C PHA2P32452 334 aa5.69□□□□□ -1.5
SHO1YER118C AVT5P38176 459 aa5.69□□□□□ -1.5
SHO1YER118C OST3P48439 350 aa5.69□□□□□ -1.5
SHO1YER118C BRR6P53062 197 aa5.69□□□□□ -1.5
SHO1YER118C YGL235WP53071 178 aa5.69□□□□□ -1.5
SHO1YER118C TPN1P53099 579 aa5.69□□□□□ -1.5
SHO1YER118C GTR2P53290 341 aa5.69□□□□□ -1.5
SHO1YER118C TDA7P53882 636 aaPredicted RBP5.69□□□□□ -1.5
SHO1YER118C TRM82Q03774 444 aa5.69□□□□□ -1.5
SHO1YER118C TAF9Q05027 157 aa5.69□□□□□ -1.5
SHO1YER118C DPP1Q05521 289 aa5.69□□□□□ -1.5
SHO1YER118C YLR446WQ06204 433 aa5.69□□□□□ -1.5
SHO1YER118C HNT3Q08702 217 aa5.69□□□□□ -1.5
SHO1YER118C RPS24AP0CX31 135 aaKnown RBP5.68□□□□□ -1.5
SHO1YER118C RPS24BP0CX32 135 aaKnown RBP5.68□□□□□ -1.5
SHO1YER118C CDC43P18898 376 aa5.68□□□□□ -1.5
SHO1YER118C PHO80P20052 293 aa5.68□□□□□ -1.5
SHO1YER118C PPH21P23594 369 aa5.68□□□□□ -1.5
SHO1YER118C TPS2P31688 896 aaKnown RBP5.68□□□□□ -1.5
SHO1YER118C SPS18P32572 300 aa5.68□□□□□ -1.5
SHO1YER118C YBP1P38315 674 aa5.68□□□□□ -1.5
SHO1YER118C GUF1P46943 645 aa5.68□□□□□ -1.5
SHO1YER118C SBH2P52871 88 aa5.68□□□□□ -1.5
SHO1YER118C YGR042WP53227 271 aa5.68□□□□□ -1.5
SHO1YER118C FYV6P53913 173 aa5.68□□□□□ -1.5
SHO1YER118C NRK1P53915 240 aa5.68□□□□□ -1.5
SHO1YER118C SWS2P53937 143 aa5.68□□□□□ -1.5
SHO1YER118C RHO3Q00245 231 aaKnown RBP5.68□□□□□ -1.5
SHO1YER118C PEX30Q06169 523 aa5.68□□□□□ -1.5
SHO1YER118C IRC10Q08118 586 aa5.68□□□□□ -1.5
SHO1YER118C NSL1Q12143 216 aa5.68□□□□□ -1.5
SHO1YER118C YDR018CQ12185 396 aa5.68□□□□□ -1.5
SHO1YER118C YLR126CQ12288 251 aa5.68□□□□□ -1.5
SHO1YER118C EMP46Q12396 444 aa5.68□□□□□ -1.5
SHO1YER118C PCL9Q12477 304 aa5.68□□□□□ -1.5
SHO1YER118C PRM4Q12498 284 aa5.68□□□□□ -1.5
SHO1YER118C TUB1P09733 447 aaKnown RBP5.67□□□□□ -1.5
SHO1YER118C RPL16AP26784 199 aaKnown RBP5.67□□□□□ -1.5
SHO1YER118C ECM13P38195 257 aa5.67□□□□□ -1.5
SHO1YER118C WSC4P38739 605 aa5.67□□□□□ -1.5
SHO1YER118C KRE29P40026 464 aa5.67□□□□□ -1.5
SHO1YER118C YJL016WP47072 561 aa5.67□□□□□ -1.5
SHO1YER118C JAC1P53193 184 aa5.67□□□□□ -1.5
SHO1YER118C MSO1P53604 210 aaKnown RBP5.67□□□□□ -1.5
SHO1YER118C RIF2Q06208 395 aa5.67□□□□□ -1.5
SHO1YER118C MRX9Q07349 420 aaKnown RBP5.67□□□□□ -1.5
SHO1YER118C YEH2Q07950 538 aa5.67□□□□□ -1.5
SHO1YER118C SNX3Q08826 162 aaKnown RBP5.67□□□□□ -1.5
SHO1YER118C MMT2Q08970 484 aa5.67□□□□□ -1.5
SHO1YER118C FRE8Q12209 686 aa5.67□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 39.8 ms