RNA–Protein interactions for RNA: YER059W

PCL6, Transcript of Pho85p cyclin of the Pho80p subfamily, yeast

Gene PCL6, Length 1,263 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCL6	YER059W	NPT1	P39683	429 aa	Known RBP	4.11	□□□□□ -1.75
PCL6	YER059W	FMC1	P40491	155 aa		4.11	□□□□□ -1.75
PCL6	YER059W	YIL054W	P40524	105 aa		4.11	□□□□□ -1.75
PCL6	YER059W	MIC19	P43594	170 aa		4.11	□□□□□ -1.75
PCL6	YER059W	TPN1	P53099	579 aa		4.11	□□□□□ -1.75
PCL6	YER059W	YNL040W	P53960	456 aa	Predicted RBP	4.11	□□□□□ -1.75
PCL6	YER059W	TRM44	Q02648	567 aa	Known RBP	4.11	□□□□□ -1.75
PCL6	YER059W	PET117	Q02771	107 aa		4.11	□□□□□ -1.75
PCL6	YER059W	YML018C	Q03730	393 aa		4.11	□□□□□ -1.75
PCL6	YER059W	YMR244W	Q04018	355 aa		4.11	□□□□□ -1.75
PCL6	YER059W	YBL111C	Q3E7Y5	667 aa		4.11	□□□□□ -1.75
PCL6	YER059W	YAL067W-A	Q8TGK6	75 aa		4.11	□□□□□ -1.75
PCL6	YER059W	ZRT3	P34240	503 aa		4.1	□□□□□ -1.75
PCL6	YER059W	BIG1	P38813	335 aa		4.1	□□□□□ -1.75
PCL6	YER059W	SHC1	P39000	512 aa		4.1	□□□□□ -1.75
PCL6	YER059W	KRE29	P40026	464 aa		4.1	□□□□□ -1.75
PCL6	YER059W	TIM21	P53220	239 aa		4.1	□□□□□ -1.75
PCL6	YER059W	TIM11	P81449	96 aa	Predicted RBP	4.1	□□□□□ -1.75
PCL6	YER059W	SRL4	Q03085	281 aa		4.1	□□□□□ -1.75
PCL6	YER059W	ARC18	Q05933	178 aa	Known RBP	4.1	□□□□□ -1.75
PCL6	YER059W	ARV1	Q06541	321 aa		4.1	□□□□□ -1.75
PCL6	YER059W	RUD3	Q12234	484 aa	Known RBP	4.1	□□□□□ -1.75
PCL6	YER059W	TRM10	Q12400	293 aa		4.1	□□□□□ -1.75
PCL6	YER059W	ADH1	P00330	348 aa	Known RBP	4.09	□□□□□ -1.75
PCL6	YER059W	RPS3	P05750	240 aa	Known RBP	4.09	□□□□□ -1.75
PCL6	YER059W	PET494	P07390	489 aa	Predicted RBP	4.09	□□□□□ -1.75
PCL6	YER059W	IMP1	P28627	190 aa		4.09	□□□□□ -1.75
PCL6	YER059W	AIM29	P36154	155 aa		4.09	□□□□□ -1.75
PCL6	YER059W	FRM2	P37261	193 aa		4.09	□□□□□ -1.75
PCL6	YER059W	PRS4	P38063	326 aa	Predicted RBP	4.09	□□□□□ -1.75
PCL6	YER059W	RPL10	P41805	221 aa	Known RBP	4.09	□□□□□ -1.75
PCL6	YER059W	YFL064C	P43540	174 aa		4.09	□□□□□ -1.75
PCL6	YER059W	ASG7	P46993	209 aa		4.09	□□□□□ -1.75
PCL6	YER059W	IBA57	P47158	497 aa		4.09	□□□□□ -1.75
PCL6	YER059W	MRPL50	P53724	139 aa		4.09	□□□□□ -1.75
PCL6	YER059W	RNY1	Q02933	434 aa	Known RBP	4.09	□□□□□ -1.75
PCL6	YER059W	BOP2	Q06150	570 aa		4.09	□□□□□ -1.75
PCL6	YER059W	SDO1	Q07953	250 aa	Known RBP	4.09	□□□□□ -1.75
PCL6	YER059W	TPI1	P00942	248 aa	Known RBP	4.08	□□□□□ -1.76
PCL6	YER059W	MRPL3	P36516	390 aa		4.08	□□□□□ -1.76
PCL6	YER059W	MBA1	P38300	278 aa		4.08	□□□□□ -1.76
PCL6	YER059W	RRG9	P40156	214 aa		4.08	□□□□□ -1.76
PCL6	YER059W	YJR012C	P47087	207 aa		4.08	□□□□□ -1.76
PCL6	YER059W	YGL118C	P53132	145 aa		4.08	□□□□□ -1.76
PCL6	YER059W	YGR018C	P53211	109 aa		4.08	□□□□□ -1.76
PCL6	YER059W	MNT4	P53745	580 aa		4.08	□□□□□ -1.76
PCL6	YER059W	CDC14	Q00684	551 aa		4.08	□□□□□ -1.76
PCL6	YER059W	VPS60	Q03390	229 aa		4.08	□□□□□ -1.76
PCL6	YER059W	YDR209C	Q03480	137 aa		4.08	□□□□□ -1.76
PCL6	YER059W	SEC10	Q06245	871 aa		4.08	□□□□□ -1.76
PCL6	YER059W	YOR029W	Q12243	111 aa		4.08	□□□□□ -1.76
PCL6	YER059W	RPS19A	P07280	144 aa	Known RBP	4.07	□□□□□ -1.76
PCL6	YER059W	RPS19B	P07281	144 aa	Predicted RBP	4.07	□□□□□ -1.76
PCL6	YER059W	TPS2	P31688	896 aa	Known RBP	4.07	□□□□□ -1.76
PCL6	YER059W	VPH2	P32341	215 aa		4.07	□□□□□ -1.76
PCL6	YER059W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
PCL6	YER059W	YFL012W	P43580	148 aa		4.07	□□□□□ -1.76
PCL6	YER059W	PRP24	P49960	444 aa	Known RBP	4.07	□□□□□ -1.76
PCL6	YER059W	PAM18	Q07914	168 aa		4.07	□□□□□ -1.76
PCL6	YER059W	FLO11	P08640	1367 aa		4.06	□□□□□ -1.76
PCL6	YER059W	YMR316C-A	I2HB70	103 aa		4.06	□□□□□ -1.76
PCL6	YER059W	YAL064W-B	O13512	126 aa		4.06	□□□□□ -1.76
PCL6	YER059W	YCR016W	P25617	290 aa	Known RBP	4.06	□□□□□ -1.76
PCL6	YER059W	PEX3	P28795	441 aa		4.06	□□□□□ -1.76
PCL6	YER059W	ZIP1	P31111	875 aa		4.06	□□□□□ -1.76
PCL6	YER059W	ARO4	P32449	370 aa	Known RBP	4.06	□□□□□ -1.76
PCL6	YER059W	PRS1	P32895	427 aa	Known RBP	4.06	□□□□□ -1.76
PCL6	YER059W	MRPS9	P38120	278 aa		4.06	□□□□□ -1.76
PCL6	YER059W	MRP21	P38175	177 aa		4.06	□□□□□ -1.76
PCL6	YER059W	PRS2	P38620	318 aa	Known RBP	4.06	□□□□□ -1.76
PCL6	YER059W	SEN34	P39707	275 aa		4.06	□□□□□ -1.76
PCL6	YER059W	YIL012W	P40551	113 aa		4.06	□□□□□ -1.76
PCL6	YER059W	LIF1	P53150	421 aa		4.06	□□□□□ -1.76
PCL6	YER059W	TIR4	Q12218	487 aa	Predicted RBP	4.06	□□□□□ -1.76
PCL6	YER059W	SME1	Q12330	94 aa	Predicted RBP	4.06	□□□□□ -1.76
PCL6	YER059W	ATG31	Q12421	196 aa		4.06	□□□□□ -1.76
PCL6	YER059W	DFM1	Q12743	341 aa	Known RBP	4.06	□□□□□ -1.76
PCL6	YER059W	YOS9	Q99220	542 aa		4.06	□□□□□ -1.76
PCL6	YER059W	CDC42	P19073	191 aa		4.05	□□□□□ -1.76
PCL6	YER059W	SRB4	P32569	687 aa		4.05	□□□□□ -1.76
PCL6	YER059W	ALK2	P32789	676 aa	Predicted RBP	4.05	□□□□□ -1.76
PCL6	YER059W	DBP7	P36120	742 aa	Known RBP	4.05	□□□□□ -1.76
PCL6	YER059W	ATG12	P38316	186 aa		4.05	□□□□□ -1.76
PCL6	YER059W	DED81	P38707	554 aa	Known RBP	4.05	□□□□□ -1.76
PCL6	YER059W	EDC2	P40023	145 aa	Predicted RBP	4.05	□□□□□ -1.76
PCL6	YER059W	AVT7	P40501	490 aa		4.05	□□□□□ -1.76
PCL6	YER059W	UFE1	P41834	346 aa		4.05	□□□□□ -1.76
PCL6	YER059W	YPL113C	Q02961	396 aa		4.05	□□□□□ -1.76
PCL6	YER059W	YOL085C	Q99345	113 aa		4.05	□□□□□ -1.76
PCL6	YER059W	RPP0	P05317	312 aa	Known RBP	4.04	□□□□□ -1.76
PCL6	YER059W	TCD1	P38756	429 aa		4.04	□□□□□ -1.76
PCL6	YER059W	SEO1	P39709	593 aa		4.04	□□□□□ -1.76
PCL6	YER059W	YER184C	P39961	794 aa		4.04	□□□□□ -1.76
PCL6	YER059W	COQ5	P49017	307 aa		4.04	□□□□□ -1.76
PCL6	YER059W	MAL13	P53338	473 aa		4.04	□□□□□ -1.76
PCL6	YER059W	MRS2	Q01926	470 aa		4.04	□□□□□ -1.76
PCL6	YER059W	ECM19	Q06011	112 aa		4.04	□□□□□ -1.76
PCL6	YER059W	MSH5	Q12175	901 aa		4.04	□□□□□ -1.76
PCL6	YER059W	CFT1	Q06632	1357 aa	Known RBP	4.03	□□□□□ -1.76
PCL6	YER059W	AUS1	Q08409	1394 aa		4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 28.1 ms