RNA–Protein interactions for RNA: YDR469W

SDC1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SDC1, Length 528 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDC1YDR469W TAF14P35189 244 aa1.98□□□□□ -2.09
SDC1YDR469W MCH2P36032 473 aa1.98□□□□□ -2.09
SDC1YDR469W JEN1P36035 616 aa1.98□□□□□ -2.09
SDC1YDR469W PMU1P36069 295 aa1.98□□□□□ -2.09
SDC1YDR469W MRX3P38172 270 aa1.98□□□□□ -2.09
SDC1YDR469W CUE1P38428 203 aa1.98□□□□□ -2.09
SDC1YDR469W TRM5P38793 499 aa1.98□□□□□ -2.09
SDC1YDR469W NDT80P38830 627 aa1.98□□□□□ -2.09
SDC1YDR469W EGD2P38879 174 aaKnown RBP1.98□□□□□ -2.09
SDC1YDR469W PET8P38921 284 aa1.98□□□□□ -2.09
SDC1YDR469W SOP4P39543 234 aaPredicted RBP1.98□□□□□ -2.09
SDC1YDR469W HEM14P40012 539 aa1.98□□□□□ -2.09
SDC1YDR469W SMB1P40018 196 aaKnown RBP1.98□□□□□ -2.09
SDC1YDR469W HAC1P41546 238 aa1.98□□□□□ -2.09
SDC1YDR469W CIN2P46670 268 aa1.98□□□□□ -2.09
SDC1YDR469W YJR079WP47126 109 aa1.98□□□□□ -2.09
SDC1YDR469W ADO1P47143 340 aaKnown RBP1.98□□□□□ -2.09
SDC1YDR469W UBC13P52490 153 aa1.98□□□□□ -2.09
SDC1YDR469W YGL159WP53110 370 aa1.98□□□□□ -2.09
SDC1YDR469W ALG13P53178 202 aa1.98□□□□□ -2.09
SDC1YDR469W MAL13P53338 473 aa1.98□□□□□ -2.09
SDC1YDR469W RHO3Q00245 231 aaKnown RBP1.98□□□□□ -2.09
SDC1YDR469W RPM2Q02773 1202 aa1.98□□□□□ -2.09
SDC1YDR469W TDA1Q03533 586 aa1.98□□□□□ -2.09
SDC1YDR469W DPP1Q05521 289 aa1.98□□□□□ -2.09
SDC1YDR469W YPR091CQ06833 770 aa1.98□□□□□ -2.09
SDC1YDR469W ABP140Q08641 628 aaKnown RBP1.98□□□□□ -2.09
SDC1YDR469W VIK1Q12045 647 aa1.98□□□□□ -2.09
SDC1YDR469W SLM3Q12093 417 aa1.98□□□□□ -2.09
SDC1YDR469W FCY22Q12119 530 aa1.98□□□□□ -2.09
SDC1YDR469W JLP1Q12358 412 aa1.98□□□□□ -2.09
SDC1YDR469W YDL012CQ12489 107 aa1.98□□□□□ -2.09
SDC1YDR469W YPL119C-AQ3E751 87 aa1.98□□□□□ -2.09
SDC1YDR469W YCL012CQ8J0M4 134 aa1.98□□□□□ -2.09
SDC1YDR469W NCB2Q92317 146 aa1.98□□□□□ -2.09
SDC1YDR469W STH1P32597 1359 aa1.98□□□□□ -2.09
SDC1YDR469W QCR7P00128 127 aa1.97□□□□□ -2.09
SDC1YDR469W TRP1P00912 224 aa1.97□□□□□ -2.09
SDC1YDR469W RPS3P05750 240 aaKnown RBP1.97□□□□□ -2.09
SDC1YDR469W SNF6P18888 332 aa1.97□□□□□ -2.09
SDC1YDR469W CHA1P25379 360 aaKnown RBP1.97□□□□□ -2.09
SDC1YDR469W YCR102CP25608 368 aa1.97□□□□□ -2.09
SDC1YDR469W RFA3P26755 122 aaKnown RBP1.97□□□□□ -2.09
SDC1YDR469W DEP1P31385 405 aa1.97□□□□□ -2.09
SDC1YDR469W PDC2P32896 925 aa1.97□□□□□ -2.09
SDC1YDR469W MIX23P38162 196 aa1.97□□□□□ -2.09
SDC1YDR469W YBR062CP38239 180 aa1.97□□□□□ -2.09
SDC1YDR469W NPT1P39683 429 aaKnown RBP1.97□□□□□ -2.09
SDC1YDR469W MAM33P40513 266 aa1.97□□□□□ -2.09
SDC1YDR469W RPR2P40571 144 aa1.97□□□□□ -2.09
SDC1YDR469W YFL067WP43537 175 aa1.97□□□□□ -2.09
SDC1YDR469W IBA57P47158 497 aa1.97□□□□□ -2.09
SDC1YDR469W NIF3P53081 288 aa1.97□□□□□ -2.09
SDC1YDR469W NRM1P53718 249 aa1.97□□□□□ -2.09
SDC1YDR469W YNL247WP53852 767 aaKnown RBP1.97□□□□□ -2.09
SDC1YDR469W VAC7P53950 1165 aa1.97□□□□□ -2.09
SDC1YDR469W CTF19Q02732 369 aa1.97□□□□□ -2.09
SDC1YDR469W YMR027WQ04371 470 aa1.97□□□□□ -2.09
SDC1YDR469W GMC1Q04399 608 aa1.97□□□□□ -2.09
SDC1YDR469W PEX10Q05568 337 aa1.97□□□□□ -2.09
SDC1YDR469W GAS2Q06135 555 aa1.97□□□□□ -2.09
SDC1YDR469W PEX30Q06169 523 aa1.97□□□□□ -2.09
SDC1YDR469W LOT6Q07923 191 aa1.97□□□□□ -2.09
SDC1YDR469W RRS1Q08746 203 aaKnown RBP1.97□□□□□ -2.09
SDC1YDR469W CSM4Q08955 156 aa1.97□□□□□ -2.09
SDC1YDR469W TAF10Q12030 206 aa1.97□□□□□ -2.09
SDC1YDR469W YOR114WQ12219 294 aa1.97□□□□□ -2.09
SDC1YDR469W AYT1Q12226 474 aa1.97□□□□□ -2.09
SDC1YDR469W YCT1Q12235 531 aa1.97□□□□□ -2.09
SDC1YDR469W SNU23Q12368 194 aaPredicted RBP1.97□□□□□ -2.09
SDC1YDR469W MHP1P43638 1398 aa1.97□□□□□ -2.09
SDC1YDR469W HEM4P06174 275 aa1.96□□□□□ -2.1
SDC1YDR469W CYC3P06182 269 aa1.96□□□□□ -2.1
SDC1YDR469W RPS18AP0CX55 146 aaKnown RBP1.96□□□□□ -2.1
SDC1YDR469W RPS18BP0CX56 146 aaPredicted RBP1.96□□□□□ -2.1
SDC1YDR469W MRPL20P22354 195 aaPredicted RBP1.96□□□□□ -2.1
SDC1YDR469W PMT2P31382 759 aa1.96□□□□□ -2.1
SDC1YDR469W YKL187CP34231 750 aa1.96□□□□□ -2.1
SDC1YDR469W ERG10P41338 398 aaKnown RBP1.96□□□□□ -2.1
SDC1YDR469W AIM23P47015 356 aa1.96□□□□□ -2.1
SDC1YDR469W IBD2P53892 351 aa1.96□□□□□ -2.1
SDC1YDR469W TAF9Q05027 157 aa1.96□□□□□ -2.1
SDC1YDR469W YPR098CQ06089 161 aa1.96□□□□□ -2.1
SDC1YDR469W MRX9Q07349 420 aaKnown RBP1.96□□□□□ -2.1
SDC1YDR469W HEM25Q07534 307 aa1.96□□□□□ -2.1
SDC1YDR469W YLR126CQ12288 251 aa1.96□□□□□ -2.1
SDC1YDR469W SME1Q12330 94 aaPredicted RBP1.96□□□□□ -2.1
SDC1YDR469W YDL199CQ12407 687 aa1.96□□□□□ -2.1
SDC1YDR469W TUS1Q06412 1307 aa1.95□□□□□ -2.1
SDC1YDR469W RPL35AP0CX84 120 aaKnown RBP1.95□□□□□ -2.1
SDC1YDR469W RPL35BP0CX85 120 aaKnown RBP1.95□□□□□ -2.1
SDC1YDR469W PPH21P23594 369 aa1.95□□□□□ -2.1
SDC1YDR469W MIR1P23641 311 aaKnown RBP1.95□□□□□ -2.1
SDC1YDR469W HOM6P31116 359 aaKnown RBP1.95□□□□□ -2.1
SDC1YDR469W SPS18P32572 300 aa1.95□□□□□ -2.1
SDC1YDR469W SGE1P33335 543 aa1.95□□□□□ -2.1
SDC1YDR469W KDX1P36005 433 aa1.95□□□□□ -2.1
SDC1YDR469W ANR2P36090 516 aaPredicted RBP1.95□□□□□ -2.1
SDC1YDR469W VPS51P36116 164 aa1.95□□□□□ -2.1
SDC1YDR469W HEK2P38199 381 aaKnown RBP RIP-Chip data1.95□□□□□ -2.1not detected
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms