RNA–Protein interactions for RNA: YDR182W

CDC1, Transcript of Putative lipid phosphatase of the endoplasmic reticulum, yeast

Gene CDC1, Length 1,476 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC1	YDR182W	SPO73	P40031	143 aa		5.53	□□□□□ -1.52
CDC1	YDR182W	PRE6	P40303	254 aa	Known RBP	5.53	□□□□□ -1.52
CDC1	YDR182W	PFS2	P42841	465 aa	Known RBP	5.53	□□□□□ -1.52
CDC1	YDR182W	YGL101W	P53144	215 aa		5.53	□□□□□ -1.52
CDC1	YDR182W	ASI3	P53983	676 aa		5.53	□□□□□ -1.52
CDC1	YDR182W	ABZ2	Q03266	374 aa		5.53	□□□□□ -1.52
CDC1	YDR182W	RRP9	Q06506	573 aa	Known RBP	5.53	□□□□□ -1.52
CDC1	YDR182W	YLR040C	Q07988	224 aa		5.53	□□□□□ -1.52
CDC1	YDR182W	DTR1	P38125	572 aa		5.52	□□□□□ -1.53
CDC1	YDR182W	SBE22	P38814	852 aa		5.52	□□□□□ -1.53
CDC1	YDR182W	YAR028W	P39548	234 aa		5.52	□□□□□ -1.53
CDC1	YDR182W	SLS1	P42900	643 aa		5.52	□□□□□ -1.53
CDC1	YDR182W	CHA4	P43634	648 aa		5.52	□□□□□ -1.53
CDC1	YDR182W	NCA3	P46955	337 aa		5.52	□□□□□ -1.53
CDC1	YDR182W	IDS2	P46958	469 aa		5.52	□□□□□ -1.53
CDC1	YDR182W	YGR016W	P53209	190 aa		5.52	□□□□□ -1.53
CDC1	YDR182W	APM1	Q00776	475 aa	Predicted RBP	5.52	□□□□□ -1.53
CDC1	YDR182W	NUP49	Q02199	472 aa		5.52	□□□□□ -1.53
CDC1	YDR182W	YMR279C	Q03263	540 aa		5.52	□□□□□ -1.53
CDC1	YDR182W	YDR387C	Q04162	555 aa		5.52	□□□□□ -1.53
CDC1	YDR182W	RSA3	Q05942	220 aa	Known RBP	5.52	□□□□□ -1.53
CDC1	YDR182W	RRP15	Q06511	250 aa	Predicted RBP	5.52	□□□□□ -1.53
CDC1	YDR182W	YDL114W	Q07530	308 aa		5.52	□□□□□ -1.53
CDC1	YDR182W	RTR2	Q12378	196 aa		5.52	□□□□□ -1.53
CDC1	YDR182W	RPS23A	P0CX29	145 aa	Known RBP	5.51	□□□□□ -1.53
CDC1	YDR182W	RPS23B	P0CX30	145 aa		5.51	□□□□□ -1.53
CDC1	YDR182W	STE18	P18852	110 aa		5.51	□□□□□ -1.53
CDC1	YDR182W	KRR1	P25586	316 aa	Predicted RBP	5.51	□□□□□ -1.53
CDC1	YDR182W	POL4	P25615	582 aa		5.51	□□□□□ -1.53
CDC1	YDR182W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	5.51	□□□□□ -1.53	RIP-Chip
CDC1	YDR182W	MNS1	P32906	549 aa		5.51	□□□□□ -1.53
CDC1	YDR182W	YHL044W	P38727	235 aa		5.51	□□□□□ -1.53
CDC1	YDR182W	MLH1	P38920	769 aa		5.51	□□□□□ -1.53
CDC1	YDR182W	MSS4	P38994	779 aa		5.51	□□□□□ -1.53
CDC1	YDR182W	BUR6	P40096	142 aa		5.51	□□□□□ -1.53
CDC1	YDR182W	YIR020C	P40575	100 aa		5.51	□□□□□ -1.53
CDC1	YDR182W	DIM1	P41819	318 aa	Known RBP	5.51	□□□□□ -1.53
CDC1	YDR182W	FAR7	P43592	221 aa		5.51	□□□□□ -1.53
CDC1	YDR182W	YJL055W	P47044	245 aa		5.51	□□□□□ -1.53
CDC1	YDR182W	SBH2	P52871	88 aa		5.51	□□□□□ -1.53
CDC1	YDR182W	RMD9	P53140	646 aa	Known RBP	5.51	□□□□□ -1.53
CDC1	YDR182W	ELP6	Q04868	273 aa		5.51	□□□□□ -1.53
CDC1	YDR182W	YMR226C	Q05016	267 aa	Known RBP	5.51	□□□□□ -1.53
CDC1	YDR182W	TAZ1	Q06510	381 aa		5.51	□□□□□ -1.53
CDC1	YDR182W	NDL1	Q06568	189 aa		5.51	□□□□□ -1.53
CDC1	YDR182W	VIK1	Q12045	647 aa		5.51	□□□□□ -1.53
CDC1	YDR182W	CCW14	O13547	238 aa		5.51	□□□□□ -1.53
CDC1	YDR182W	MSW1	P04803	379 aa		5.51	□□□□□ -1.53
CDC1	YDR182W	STE50	P25344	346 aa		5.51	□□□□□ -1.53
CDC1	YDR182W	BOS1	P25385	244 aa		5.51	□□□□□ -1.53
CDC1	YDR182W	YCL002C	P25565	263 aa		5.51	□□□□□ -1.53
CDC1	YDR182W	RPC82	P32349	654 aa		5.51	□□□□□ -1.53
CDC1	YDR182W	GLC7	P32598	312 aa	Known RBP	5.51	□□□□□ -1.53
CDC1	YDR182W	SHM2	P37291	469 aa	Known RBP	5.51	□□□□□ -1.53
CDC1	YDR182W	APL3	P38065	1025 aa		5.51	□□□□□ -1.53
CDC1	YDR182W	CHL4	P38907	458 aa		5.51	□□□□□ -1.53
CDC1	YDR182W	SLZ1	P40167	298 aa		5.51	□□□□□ -1.53
CDC1	YDR182W	FLX1	P40464	311 aa		5.51	□□□□□ -1.53
CDC1	YDR182W	IRC5	P43610	853 aa		5.51	□□□□□ -1.53
CDC1	YDR182W	SSY5	P47002	699 aa		5.51	□□□□□ -1.53
CDC1	YDR182W	PEF1	P53238	335 aa		5.51	□□□□□ -1.53
CDC1	YDR182W	PET191	Q02772	108 aa		5.51	□□□□□ -1.53
CDC1	YDR182W	SNA4	Q07549	140 aa		5.51	□□□□□ -1.53
CDC1	YDR182W	RDL1	Q12305	139 aa	Known RBP	5.51	□□□□□ -1.53
CDC1	YDR182W	RPS13	P05756	151 aa	Known RBP	5.5	□□□□□ -1.53
CDC1	YDR182W	SNF4	P12904	322 aa		5.5	□□□□□ -1.53
CDC1	YDR182W	YME2	P32843	850 aa		5.5	□□□□□ -1.53
CDC1	YDR182W	MRPL6	P32904	214 aa		5.5	□□□□□ -1.53
CDC1	YDR182W	SIC1	P38634	284 aa		5.5	□□□□□ -1.53
CDC1	YDR182W	YER184C	P39961	794 aa		5.5	□□□□□ -1.53
CDC1	YDR182W	YIP5	P53108	310 aa		5.5	□□□□□ -1.53
CDC1	YDR182W	ASI2	P53895	289 aa		5.5	□□□□□ -1.53
CDC1	YDR182W	PGA1	P53896	198 aa		5.5	□□□□□ -1.53
CDC1	YDR182W	SSK1	Q07084	712 aa		5.5	□□□□□ -1.53
CDC1	YDR182W	MCH4	Q08268	501 aa		5.5	□□□□□ -1.53
CDC1	YDR182W	SYC1	Q08553	188 aa	Predicted RBP	5.5	□□□□□ -1.53
CDC1	YDR182W	SIA1	Q12212	622 aa		5.5	□□□□□ -1.53
CDC1	YDR182W	COX5B	P00425	151 aa		5.49	□□□□□ -1.53
CDC1	YDR182W	APE2	P32454	952 aa	Known RBP	5.49	□□□□□ -1.53
CDC1	YDR182W	RPC34	P32910	317 aa		5.49	□□□□□ -1.53
CDC1	YDR182W	VBA2	P38358	474 aa	Known RBP	5.49	□□□□□ -1.53
CDC1	YDR182W	PHO90	P39535	881 aa		5.49	□□□□□ -1.53
CDC1	YDR182W	RRG9	P40156	214 aa		5.49	□□□□□ -1.53
CDC1	YDR182W	GLR1	P41921	483 aa	Known RBP	5.49	□□□□□ -1.53
CDC1	YDR182W	AGP3	P43548	558 aa		5.49	□□□□□ -1.53
CDC1	YDR182W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	5.49	□□□□□ -1.53	not detected
CDC1	YDR182W	OST6	Q03723	332 aa		5.49	□□□□□ -1.53
CDC1	YDR182W	DAL4	Q04895	635 aa		5.49	□□□□□ -1.53
CDC1	YDR182W	YPL225W	Q08971	146 aa	Known RBP	5.49	□□□□□ -1.53
CDC1	YDR182W	ACF2	Q12168	779 aa		5.49	□□□□□ -1.53
CDC1	YDR182W	FRE8	Q12209	686 aa		5.49	□□□□□ -1.53
CDC1	YDR182W	FSH3	Q99369	266 aa		5.49	□□□□□ -1.53
CDC1	YDR182W	REP1	P03871	373 aa		5.48	□□□□□ -1.53
CDC1	YDR182W	KIN28	P06242	306 aa		5.48	□□□□□ -1.53
CDC1	YDR182W	RPB9	P27999	122 aa		5.48	□□□□□ -1.53
CDC1	YDR182W	SFH5	P47008	294 aa		5.48	□□□□□ -1.53
CDC1	YDR182W	EXG2	P52911	562 aa		5.48	□□□□□ -1.53
CDC1	YDR182W	YDR239C	Q03780	787 aa		5.48	□□□□□ -1.53
CDC1	YDR182W	MSS11	Q03825	758 aa		5.48	□□□□□ -1.53
CDC1	YDR182W	NNT1	Q05874	261 aa		5.48	□□□□□ -1.53

Retrieved 100 of 5,963 RNA–protein pairs in 176.6 ms