RNA–Protein interactions for RNA: YDR177W

UBC1, Transcript of Ubiquitin-conjugating enzyme, yeast

Gene UBC1, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC1	YDR177W	PRP18	P33411	251 aa	Predicted RBP	4.08	□□□□□ -1.76
UBC1	YDR177W	SDS24	P38314	527 aa		4.08	□□□□□ -1.76
UBC1	YDR177W	YFR057W	P43625	151 aa		4.08	□□□□□ -1.76
UBC1	YDR177W	HAM1	P47119	197 aa	Known RBP	4.08	□□□□□ -1.76
UBC1	YDR177W	SHY1	P53266	389 aa		4.08	□□□□□ -1.76
UBC1	YDR177W	CUS2	P53830	285 aa	Predicted RBP	4.08	□□□□□ -1.76
UBC1	YDR177W	SFH1	Q06168	426 aa		4.08	□□□□□ -1.76
UBC1	YDR177W	RIF2	Q06208	395 aa		4.08	□□□□□ -1.76
UBC1	YDR177W	MHR1	Q06630	226 aa		4.08	□□□□□ -1.76
UBC1	YDR177W	RSA1	Q08932	381 aa		4.08	□□□□□ -1.76
UBC1	YDR177W	JID1	Q12350	301 aa		4.08	□□□□□ -1.76
UBC1	YDR177W	SNU23	Q12368	194 aa	Predicted RBP	4.08	□□□□□ -1.76
UBC1	YDR177W	SNF8	Q12483	233 aa		4.08	□□□□□ -1.76
UBC1	YDR177W	MMS1	Q06211	1407 aa		4.07	□□□□□ -1.76
UBC1	YDR177W	MHP1	P43638	1398 aa		4.07	□□□□□ -1.76
UBC1	YDR177W	RPL27A	P0C2H6	136 aa	Known RBP	4.07	□□□□□ -1.76
UBC1	YDR177W	RPL27B	P0C2H7	136 aa	Known RBP	4.07	□□□□□ -1.76
UBC1	YDR177W	YBR121C-A	P0C5L4	52 aa		4.07	□□□□□ -1.76
UBC1	YDR177W	CPR4	P25334	318 aa		4.07	□□□□□ -1.76
UBC1	YDR177W	NAM9	P27929	486 aa		4.07	□□□□□ -1.76
UBC1	YDR177W	SSO1	P32867	290 aa		4.07	□□□□□ -1.76
UBC1	YDR177W	SPT4	P32914	102 aa	Predicted RBP	4.07	□□□□□ -1.76
UBC1	YDR177W	VPS21	P36017	210 aa	Known RBP	4.07	□□□□□ -1.76
UBC1	YDR177W	CUE1	P38428	203 aa		4.07	□□□□□ -1.76
UBC1	YDR177W	NDT80	P38830	627 aa		4.07	□□□□□ -1.76
UBC1	YDR177W	YND1	P40009	630 aa		4.07	□□□□□ -1.76
UBC1	YDR177W	AIM23	P47015	356 aa		4.07	□□□□□ -1.76
UBC1	YDR177W	RPC17	P47076	161 aa		4.07	□□□□□ -1.76
UBC1	YDR177W	RAD17	P48581	401 aa		4.07	□□□□□ -1.76
UBC1	YDR177W	YPT32	P51996	222 aa	Known RBP	4.07	□□□□□ -1.76
UBC1	YDR177W	WSC2	P53832	503 aa		4.07	□□□□□ -1.76
UBC1	YDR177W	TAF9	Q05027	157 aa		4.07	□□□□□ -1.76
UBC1	YDR177W	HNT3	Q08702	217 aa		4.07	□□□□□ -1.76
UBC1	YDR177W	RPN8	Q08723	338 aa	Known RBP	4.07	□□□□□ -1.76
UBC1	YDR177W	YRA1	Q12159	226 aa	Known RBP	4.07	□□□□□ -1.76
UBC1	YDR177W	YPL245W	Q12179	454 aa	Known RBP	4.07	□□□□□ -1.76
UBC1	YDR177W	SME1	Q12330	94 aa	Predicted RBP	4.07	□□□□□ -1.76
UBC1	YDR177W	LAG2	Q92325	660 aa		4.07	□□□□□ -1.76
UBC1	YDR177W	DOP1	Q03921	1698 aa		4.06	□□□□□ -1.76
UBC1	YDR177W	SNT2	P53127	1403 aa		4.06	□□□□□ -1.76
UBC1	YDR177W	DRS2	P39524	1355 aa		4.06	□□□□□ -1.76
UBC1	YDR177W	MCK1	P21965	375 aa	Known RBP	4.06	□□□□□ -1.76
UBC1	YDR177W	YCR043C	P25361	127 aa		4.06	□□□□□ -1.76
UBC1	YDR177W	POF1	P25576	258 aa		4.06	□□□□□ -1.76
UBC1	YDR177W	RIB1	P38066	345 aa		4.06	□□□□□ -1.76
UBC1	YDR177W	PRE6	P40303	254 aa	Known RBP	4.06	□□□□□ -1.76
UBC1	YDR177W	COS10	P52924	374 aa		4.06	□□□□□ -1.76
UBC1	YDR177W	USE1	P53146	245 aa		4.06	□□□□□ -1.76
UBC1	YDR177W	HOP2	P53187	214 aa		4.06	□□□□□ -1.76
UBC1	YDR177W	VHT1	P53241	593 aa		4.06	□□□□□ -1.76
UBC1	YDR177W	CRZ1	P53968	678 aa		4.06	□□□□□ -1.76
UBC1	YDR177W	ASI3	P53983	676 aa		4.06	□□□□□ -1.76
UBC1	YDR177W	DCR2	Q05924	578 aa		4.06	□□□□□ -1.76
UBC1	YDR177W	YLR446W	Q06204	433 aa		4.06	□□□□□ -1.76
UBC1	YDR177W	SRL1	Q08673	210 aa		4.06	□□□□□ -1.76
UBC1	YDR177W	PPT2	Q12036	173 aa		4.06	□□□□□ -1.76
UBC1	YDR177W	SLM3	Q12093	417 aa		4.06	□□□□□ -1.76
UBC1	YDR177W	NUP170	P38181	1502 aa		4.05	□□□□□ -1.76
UBC1	YDR177W	CYC3	P06182	269 aa		4.05	□□□□□ -1.76
UBC1	YDR177W	CDC33	P07260	213 aa	Known RBP	4.05	□□□□□ -1.76
UBC1	YDR177W	SPS100	P13130	326 aa		4.05	□□□□□ -1.76
UBC1	YDR177W	FZO1	P38297	855 aa		4.05	□□□□□ -1.76
UBC1	YDR177W	YPC1	P38298	316 aa		4.05	□□□□□ -1.76
UBC1	YDR177W	MIC12	P38341	106 aa		4.05	□□□□□ -1.76
UBC1	YDR177W	HOC1	P47124	396 aa		4.05	□□□□□ -1.76
UBC1	YDR177W	COG7	P53195	279 aa		4.05	□□□□□ -1.76
UBC1	YDR177W	ZRG17	P53735	605 aa		4.05	□□□□□ -1.76
UBC1	YDR177W	SUR7	P54003	302 aa		4.05	□□□□□ -1.76
UBC1	YDR177W	SNZ1	Q03148	297 aa		4.05	□□□□□ -1.76
UBC1	YDR177W	GMC1	Q04399	608 aa		4.05	□□□□□ -1.76
UBC1	YDR177W	SEC10	Q06245	871 aa		4.05	□□□□□ -1.76
UBC1	YDR177W	VIK1	Q12045	647 aa		4.05	□□□□□ -1.76
UBC1	YDR177W	SFM1	Q12314	213 aa		4.05	□□□□□ -1.76
UBC1	YDR177W	CMC2	Q3E7A4	109 aa		4.05	□□□□□ -1.76
UBC1	YDR177W	STE7	P06784	515 aa		4.04	□□□□□ -1.76
UBC1	YDR177W	MATALPHA2	P0CY08	210 aa		4.04	□□□□□ -1.76
UBC1	YDR177W	HMLALPHA2	P0CY09	210 aa		4.04	□□□□□ -1.76
UBC1	YDR177W	POX1	P13711	748 aa		4.04	□□□□□ -1.76
UBC1	YDR177W	RPO26	P20435	155 aa		4.04	□□□□□ -1.76
UBC1	YDR177W	CMK2	P22517	447 aa		4.04	□□□□□ -1.76
UBC1	YDR177W	CHA1	P25379	360 aa	Known RBP	4.04	□□□□□ -1.76
UBC1	YDR177W	PEX3	P28795	441 aa		4.04	□□□□□ -1.76
UBC1	YDR177W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	4.04	□□□□□ -1.76	not detected
UBC1	YDR177W	CBT1	P36038	271 aa	Predicted RBP	4.04	□□□□□ -1.76
UBC1	YDR177W	PTH1	P38876	190 aa	Known RBP	4.04	□□□□□ -1.76
UBC1	YDR177W	PEX22	P39718	180 aa		4.04	□□□□□ -1.76
UBC1	YDR177W	GLG2	P47011	380 aa		4.04	□□□□□ -1.76
UBC1	YDR177W	VEL1	P53058	206 aa		4.04	□□□□□ -1.76
UBC1	YDR177W	PEX31	P53203	462 aa		4.04	□□□□□ -1.76
UBC1	YDR177W	MTM1	P53320	366 aa		4.04	□□□□□ -1.76
UBC1	YDR177W	DPP1	Q05521	289 aa		4.04	□□□□□ -1.76
UBC1	YDR177W	TAF10	Q12030	206 aa		4.04	□□□□□ -1.76
UBC1	YDR177W	BUD3	P25558	1636 aa		4.03	□□□□□ -1.76
UBC1	YDR177W	YMR31	P19955	123 aa		4.03	□□□□□ -1.76
UBC1	YDR177W	MRPL20	P22354	195 aa	Predicted RBP	4.03	□□□□□ -1.76
UBC1	YDR177W	GIT1	P25346	518 aa		4.03	□□□□□ -1.76
UBC1	YDR177W	SEC1	P30619	724 aa	Known RBP	4.03	□□□□□ -1.76
UBC1	YDR177W	ATS1	P31386	333 aa		4.03	□□□□□ -1.76
UBC1	YDR177W	ALK2	P32789	676 aa	Predicted RBP	4.03	□□□□□ -1.76
UBC1	YDR177W	ANR2	P36090	516 aa	Predicted RBP	4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 39.8 ms