RNA–Protein interactions for RNA: YDR164C

SEC1, Transcript of Sm-like protein involved in docking and fusion of exocytic vesicles, yeastyeast

Gene SEC1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC1YDR164C RNA14P25298 677 aaKnown RBP0.72□□□□□ -2.29
SEC1YDR164C BUB3P26449 341 aa0.72□□□□□ -2.29
SEC1YDR164C NAM9P27929 486 aa0.72□□□□□ -2.29
SEC1YDR164C FUN19P28003 413 aaPredicted RBP0.72□□□□□ -2.29
SEC1YDR164C ATP7P30902 174 aa0.72□□□□□ -2.29
SEC1YDR164C TFC1P32367 649 aa0.72□□□□□ -2.29
SEC1YDR164C RIM1P32445 135 aaKnown RBP0.72□□□□□ -2.29
SEC1YDR164C NDC1P32500 655 aa0.72□□□□□ -2.29
SEC1YDR164C YBL010CP32788 280 aa0.72□□□□□ -2.29
SEC1YDR164C SSO1P32867 290 aa0.72□□□□□ -2.29
SEC1YDR164C PTR2P32901 601 aa0.72□□□□□ -2.29
SEC1YDR164C SKN1P33336 771 aa0.72□□□□□ -2.29
SEC1YDR164C UTP11P34247 250 aaPredicted RBP0.72□□□□□ -2.29
SEC1YDR164C PHD1P36093 366 aa0.72□□□□□ -2.29
SEC1YDR164C SKG1P36169 355 aa0.72□□□□□ -2.29
SEC1YDR164C RRN10P38204 145 aa0.72□□□□□ -2.29
SEC1YDR164C LDB7P38210 180 aa0.72□□□□□ -2.29
SEC1YDR164C RTC2P38279 296 aa0.72□□□□□ -2.29
SEC1YDR164C MMS21P38632 267 aa0.72□□□□□ -2.29
SEC1YDR164C GRE3P38715 327 aaKnown RBP RIP-Chip data0.72□□□□□ -2.29not detected
SEC1YDR164C IPI1P38803 334 aaPredicted RBP0.72□□□□□ -2.29
SEC1YDR164C BIG1P38813 335 aa0.72□□□□□ -2.29
SEC1YDR164C MNL1P38888 796 aa0.72□□□□□ -2.29
SEC1YDR164C AST2P39945 430 aaKnown RBP0.72□□□□□ -2.29
SEC1YDR164C HPA3P39979 161 aa0.72□□□□□ -2.29
SEC1YDR164C THO1P40040 218 aaKnown RBP0.72□□□□□ -2.29
SEC1YDR164C FAU1P40099 211 aa0.72□□□□□ -2.29
SEC1YDR164C PCL7P40186 285 aa0.72□□□□□ -2.29
SEC1YDR164C BTT1P40314 149 aaPredicted RBP0.72□□□□□ -2.29
SEC1YDR164C COA1P40452 197 aa0.72□□□□□ -2.29
SEC1YDR164C ERG10P41338 398 aaKnown RBP0.72□□□□□ -2.29
SEC1YDR164C POP1P41812 875 aa0.72□□□□□ -2.29
SEC1YDR164C STB1P42845 420 aa0.72□□□□□ -2.29
SEC1YDR164C SER2P42941 309 aa0.72□□□□□ -2.29
SEC1YDR164C TRM9P49957 279 aa0.72□□□□□ -2.29
SEC1YDR164C COS10P52924 374 aa0.72□□□□□ -2.29
SEC1YDR164C BRR6P53062 197 aa0.72□□□□□ -2.29
SEC1YDR164C YIP5P53108 310 aa0.72□□□□□ -2.29
SEC1YDR164C JAC1P53193 184 aa0.72□□□□□ -2.29
SEC1YDR164C CDH1P53197 566 aa0.72□□□□□ -2.29
SEC1YDR164C NQM1P53228 333 aaPredicted RBP0.72□□□□□ -2.29
SEC1YDR164C NOP13P53883 403 aaKnown RBP RIP-Chip data0.72□□□□□ -2.29not detected
SEC1YDR164C YNL095CP53932 642 aa0.72□□□□□ -2.29
SEC1YDR164C MTQ1P53944 314 aa0.72□□□□□ -2.29
SEC1YDR164C ASI3P53983 676 aa0.72□□□□□ -2.29
SEC1YDR164C SPR6Q01684 191 aa0.72□□□□□ -2.29
SEC1YDR164C YKR005CQ02203 525 aa0.72□□□□□ -2.29
SEC1YDR164C RRN5Q02983 363 aa0.72□□□□□ -2.29
SEC1YDR164C ABZ2Q03266 374 aa0.72□□□□□ -2.29
SEC1YDR164C GAS3Q03655 524 aa0.72□□□□□ -2.29
SEC1YDR164C YMD8Q03697 442 aa0.72□□□□□ -2.29
SEC1YDR164C INP2Q03824 705 aa0.72□□□□□ -2.29
SEC1YDR164C RRP17Q04031 235 aaPredicted RBP0.72□□□□□ -2.29
SEC1YDR164C ERV41Q04651 352 aa0.72□□□□□ -2.29
SEC1YDR164C YLR283WQ05867 314 aa0.72□□□□□ -2.29
SEC1YDR164C YPR114WQ06107 315 aa0.72□□□□□ -2.29
SEC1YDR164C BOP2Q06150 570 aa0.72□□□□□ -2.29
SEC1YDR164C CLP1Q08685 445 aaPredicted RBP0.72□□□□□ -2.29
SEC1YDR164C FEX2Q08991 375 aa0.72□□□□□ -2.29
SEC1YDR164C VIK1Q12045 647 aa0.72□□□□□ -2.29
SEC1YDR164C TY3A-GQ12173 290 aa0.72□□□□□ -2.29
SEC1YDR164C WTM1Q12363 437 aaKnown RBP0.72□□□□□ -2.29
SEC1YDR164C YDL199CQ12407 687 aa0.72□□□□□ -2.29
SEC1YDR164C RDI1Q12434 202 aa0.72□□□□□ -2.29
SEC1YDR164C MHF2Q3E829 80 aa0.72□□□□□ -2.29
SEC1YDR164C MHF1Q3E835 90 aa0.72□□□□□ -2.29
SEC1YDR164C TY3A-IQ99219 290 aa0.72□□□□□ -2.29
SEC1YDR164C FAS2P19097 1887 aaKnown RBP0.71□□□□□ -2.3
SEC1YDR164C HAP2P06774 265 aa0.71□□□□□ -2.3
SEC1YDR164C MRS3P10566 314 aa0.71□□□□□ -2.3
SEC1YDR164C ZWF1P11412 505 aaKnown RBP0.71□□□□□ -2.3
SEC1YDR164C GCY1P14065 312 aaKnown RBP RIP-Chip data0.71□□□□□ -2.3not detected
SEC1YDR164C TAL1P15019 335 aaKnown RBP0.71□□□□□ -2.3
SEC1YDR164C ERD1P16151 362 aa0.71□□□□□ -2.3
SEC1YDR164C UGA1P17649 471 aa0.71□□□□□ -2.3
SEC1YDR164C STE18P18852 110 aa0.71□□□□□ -2.3
SEC1YDR164C SAG1P20840 650 aa0.71□□□□□ -2.3
SEC1YDR164C MRPL8P22353 238 aa0.71□□□□□ -2.3
SEC1YDR164C RPI1P23250 407 aaKnown RBP0.71□□□□□ -2.3
SEC1YDR164C PCL1P24867 279 aa0.71□□□□□ -2.3
SEC1YDR164C YCR007CP25354 239 aa0.71□□□□□ -2.3
SEC1YDR164C YCR100CP25606 316 aa0.71□□□□□ -2.3
SEC1YDR164C PHO91P27514 894 aa0.71□□□□□ -2.3
SEC1YDR164C TIP1P27654 210 aaPredicted RBP0.71□□□□□ -2.3
SEC1YDR164C FUN26P31381 517 aa0.71□□□□□ -2.3
SEC1YDR164C ASF2P32448 525 aaPredicted RBP0.71□□□□□ -2.3
SEC1YDR164C APE2P32454 952 aaKnown RBP0.71□□□□□ -2.3
SEC1YDR164C VAM7P32912 316 aa0.71□□□□□ -2.3
SEC1YDR164C PPQ1P32945 549 aa0.71□□□□□ -2.3
SEC1YDR164C CSE1P33307 960 aa0.71□□□□□ -2.3
SEC1YDR164C SGE1P33335 543 aa0.71□□□□□ -2.3
SEC1YDR164C YKL097CP34245 136 aa0.71□□□□□ -2.3
SEC1YDR164C RSM22P36056 628 aa0.71□□□□□ -2.3
SEC1YDR164C YKR015CP36111 568 aa0.71□□□□□ -2.3
SEC1YDR164C VPS51P36116 164 aa0.71□□□□□ -2.3
SEC1YDR164C MRPL40P36534 297 aa0.71□□□□□ -2.3
SEC1YDR164C QDR3P38227 689 aa0.71□□□□□ -2.3
SEC1YDR164C RCK1P38622 512 aa0.71□□□□□ -2.3
SEC1YDR164C COS8P38723 381 aa0.71□□□□□ -2.3
SEC1YDR164C PEX18P38855 283 aa0.71□□□□□ -2.3
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms