RNA–Protein interactions for RNA: YDR073W

SNF11, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SNF11, Length 510 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF11	YDR073W	YKL187C	P34231	750 aa		4.78	□□□□□ -1.64
SNF11	YDR073W	CUE1	P38428	203 aa		4.78	□□□□□ -1.64
SNF11	YDR073W	HEM14	P40012	539 aa		4.78	□□□□□ -1.64
SNF11	YDR073W	YFR057W	P43625	151 aa		4.78	□□□□□ -1.64
SNF11	YDR073W	JHD2	P47156	728 aa	Predicted RBP	4.78	□□□□□ -1.64
SNF11	YDR073W	CWC23	P52868	283 aa	Predicted RBP	4.78	□□□□□ -1.64
SNF11	YDR073W	SNU23	Q12368	194 aa	Predicted RBP	4.78	□□□□□ -1.64
SNF11	YDR073W	RPP0	P05317	312 aa	Known RBP	4.77	□□□□□ -1.65
SNF11	YDR073W	RPS3	P05750	240 aa	Known RBP	4.77	□□□□□ -1.65
SNF11	YDR073W	RPB5	P20434	215 aa		4.77	□□□□□ -1.65
SNF11	YDR073W	TPS2	P31688	896 aa	Known RBP	4.77	□□□□□ -1.65
SNF11	YDR073W	YBR241C	P38142	488 aa		4.77	□□□□□ -1.65
SNF11	YDR073W	ATG12	P38316	186 aa		4.77	□□□□□ -1.65
SNF11	YDR073W	PET8	P38921	284 aa		4.77	□□□□□ -1.65
SNF11	YDR073W	SMB1	P40018	196 aa	Known RBP	4.77	□□□□□ -1.65
SNF11	YDR073W	YJR079W	P47126	109 aa		4.77	□□□□□ -1.65
SNF11	YDR073W	IBA57	P47158	497 aa		4.77	□□□□□ -1.65
SNF11	YDR073W	YPS5	P53057	165 aa		4.77	□□□□□ -1.65
SNF11	YDR073W	RNY1	Q02933	434 aa	Known RBP	4.77	□□□□□ -1.65
SNF11	YDR073W	FAR10	Q06001	478 aa		4.77	□□□□□ -1.65
SNF11	YDR073W	SRL1	Q08673	210 aa		4.77	□□□□□ -1.65
SNF11	YDR073W	YOR114W	Q12219	294 aa		4.77	□□□□□ -1.65
SNF11	YDR073W	YCT1	Q12235	531 aa		4.77	□□□□□ -1.65
SNF11	YDR073W	CMC2	Q3E7A4	109 aa		4.77	□□□□□ -1.65
SNF11	YDR073W	HTB1	P02293	131 aa	Known RBP	4.76	□□□□□ -1.65
SNF11	YDR073W	HTB2	P02294	131 aa		4.76	□□□□□ -1.65
SNF11	YDR073W	HOM6	P31116	359 aa	Known RBP	4.76	□□□□□ -1.65
SNF11	YDR073W	MRPL10	P36520	322 aa		4.76	□□□□□ -1.65
SNF11	YDR073W	BMT2	P38278	337 aa		4.76	□□□□□ -1.65
SNF11	YDR073W	RCK1	P38622	512 aa		4.76	□□□□□ -1.65
SNF11	YDR073W	URA8	P38627	578 aa	Predicted RBP	4.76	□□□□□ -1.65
SNF11	YDR073W	CHL4	P38907	458 aa		4.76	□□□□□ -1.65
SNF11	YDR073W	EGT2	P42835	1041 aa		4.76	□□□□□ -1.65
SNF11	YDR073W	HSH155	P49955	971 aa	Known RBP	4.76	□□□□□ -1.65
SNF11	YDR073W	TPN1	P53099	579 aa		4.76	□□□□□ -1.65
SNF11	YDR073W	NRM1	P53718	249 aa		4.76	□□□□□ -1.65
SNF11	YDR073W	SEC10	Q06245	871 aa		4.76	□□□□□ -1.65
SNF11	YDR073W	MFG1	Q07684	458 aa		4.76	□□□□□ -1.65
SNF11	YDR073W	YPL245W	Q12179	454 aa	Known RBP	4.76	□□□□□ -1.65
SNF11	YDR073W	SFM1	Q12314	213 aa		4.76	□□□□□ -1.65
SNF11	YDR073W	JID1	Q12350	301 aa		4.76	□□□□□ -1.65
SNF11	YDR073W	BI3	Q9ZZW7	517 aa		4.76	□□□□□ -1.65
SNF11	YDR073W	PEX3	P28795	441 aa		4.75	□□□□□ -1.65
SNF11	YDR073W	JEN1	P36035	616 aa		4.75	□□□□□ -1.65
SNF11	YDR073W	PTH1	P38876	190 aa	Known RBP	4.75	□□□□□ -1.65
SNF11	YDR073W	DSN1	P40568	576 aa		4.75	□□□□□ -1.65
SNF11	YDR073W	BIR1	P47134	954 aa		4.75	□□□□□ -1.65
SNF11	YDR073W	PLB3	Q08108	686 aa		4.75	□□□□□ -1.65
SNF11	YDR073W	RPN8	Q08723	338 aa	Known RBP	4.75	□□□□□ -1.65
SNF11	YDR073W	YPL119C-A	Q3E751	87 aa		4.75	□□□□□ -1.65
SNF11	YDR073W	NAG1	Q8TGN9	163 aa		4.75	□□□□□ -1.65
SNF11	YDR073W	YCL021W-A	Q96VH3	125 aa		4.75	□□□□□ -1.65
SNF11	YDR073W	PET494	P07390	489 aa	Predicted RBP	4.74	□□□□□ -1.65
SNF11	YDR073W	CMK2	P22517	447 aa		4.74	□□□□□ -1.65
SNF11	YDR073W	GIT1	P25346	518 aa		4.74	□□□□□ -1.65
SNF11	YDR073W	YCR102C	P25608	368 aa		4.74	□□□□□ -1.65
SNF11	YDR073W	SSO1	P32867	290 aa		4.74	□□□□□ -1.65
SNF11	YDR073W	PTI1	P39927	425 aa	Predicted RBP	4.74	□□□□□ -1.65
SNF11	YDR073W	RMR1	P53060	241 aa		4.74	□□□□□ -1.65
SNF11	YDR073W	GET1	P53192	235 aa		4.74	□□□□□ -1.65
SNF11	YDR073W	TPC1	P53257	314 aa		4.74	□□□□□ -1.65
SNF11	YDR073W	CRH1	P53301	507 aa		4.74	□□□□□ -1.65
SNF11	YDR073W	VAC7	P53950	1165 aa		4.74	□□□□□ -1.65
SNF11	YDR073W	CRZ1	P53968	678 aa		4.74	□□□□□ -1.65
SNF11	YDR073W	YML018C	Q03730	393 aa		4.74	□□□□□ -1.65
SNF11	YDR073W	RRS1	Q08746	203 aa	Known RBP	4.74	□□□□□ -1.65
SNF11	YDR073W	STE7	P06784	515 aa		4.73	□□□□□ -1.65
SNF11	YDR073W	RPS8A	P0CX39	200 aa	Known RBP	4.73	□□□□□ -1.65
SNF11	YDR073W	RPS8B	P0CX40	200 aa	Known RBP	4.73	□□□□□ -1.65
SNF11	YDR073W	ALK2	P32789	676 aa	Predicted RBP	4.73	□□□□□ -1.65
SNF11	YDR073W	CSE2	P33308	149 aa		4.73	□□□□□ -1.65
SNF11	YDR073W	FZO1	P38297	855 aa		4.73	□□□□□ -1.65
SNF11	YDR073W	YHB1	P39676	399 aa	Known RBP	4.73	□□□□□ -1.65
SNF11	YDR073W	VAB2	P40003	282 aa		4.73	□□□□□ -1.65
SNF11	YDR073W	PRE6	P40303	254 aa	Known RBP	4.73	□□□□□ -1.65
SNF11	YDR073W	EFM5	P53200	248 aa	Known RBP	4.73	□□□□□ -1.65
SNF11	YDR073W	VPS60	Q03390	229 aa		4.73	□□□□□ -1.65
SNF11	YDR073W	YET2	Q04210	160 aa		4.73	□□□□□ -1.65
SNF11	YDR073W	PBA1	Q05778	276 aa		4.73	□□□□□ -1.65
SNF11	YDR073W	CDC123	Q05791	360 aa		4.73	□□□□□ -1.65
SNF11	YDR073W	YPR098C	Q06089	161 aa		4.73	□□□□□ -1.65
SNF11	YDR073W	MCT1	Q12283	360 aa		4.73	□□□□□ -1.65
SNF11	YDR073W	YAL064W-B	O13512	126 aa		4.72	□□□□□ -1.65
SNF11	YDR073W	RPL28	P02406	149 aa	Known RBP	4.72	□□□□□ -1.65
SNF11	YDR073W	CDC10	P25342	322 aa	Known RBP	4.72	□□□□□ -1.65
SNF11	YDR073W	ATP7	P30902	174 aa		4.72	□□□□□ -1.65
SNF11	YDR073W	AEP1	P32493	518 aa		4.72	□□□□□ -1.65
SNF11	YDR073W	CDC13	P32797	924 aa	Known RBP	4.72	□□□□□ -1.65
SNF11	YDR073W	TAF14	P35189	244 aa		4.72	□□□□□ -1.65
SNF11	YDR073W	ANR2	P36090	516 aa	Predicted RBP	4.72	□□□□□ -1.65
SNF11	YDR073W	EGD2	P38879	174 aa	Known RBP	4.72	□□□□□ -1.65
SNF11	YDR073W	ATG18	P43601	500 aa		4.72	□□□□□ -1.65
SNF11	YDR073W	BNS1	P50084	137 aa		4.72	□□□□□ -1.65
SNF11	YDR073W	COG7	P53195	279 aa		4.72	□□□□□ -1.65
SNF11	YDR073W	YNR066C	P53752	436 aa		4.72	□□□□□ -1.65
SNF11	YDR073W	RHO3	Q00245	231 aa	Known RBP	4.72	□□□□□ -1.65
SNF11	YDR073W	PRP38	Q00723	242 aa	Predicted RBP	4.72	□□□□□ -1.65
SNF11	YDR073W	YDR222W	Q04925	415 aa		4.72	□□□□□ -1.65
SNF11	YDR073W	ARC18	Q05933	178 aa	Known RBP	4.72	□□□□□ -1.65
SNF11	YDR073W	ABP140	Q08641	628 aa	Known RBP	4.72	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 17 ms