RNA–Protein interactions for RNA: YDL077C

VAM6, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VAM6, Length 3,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM6YDL077C HFI1Q12060 488 aa1.01□□□□□ -2.25
VAM6YDL077C SIA1Q12212 622 aa1.01□□□□□ -2.25
VAM6YDL077C YCT1Q12235 531 aa1.01□□□□□ -2.25
VAM6YDL077C TPO4Q12256 659 aa1.01□□□□□ -2.25
VAM6YDL077C YLR126CQ12288 251 aa1.01□□□□□ -2.25
VAM6YDL077C AHA1Q12449 350 aaKnown RBP1.01□□□□□ -2.25
VAM6YDL077C RAX2Q12465 1220 aa1.01□□□□□ -2.25
VAM6YDL077C PCC1Q3E833 88 aa1.01□□□□□ -2.25
VAM6YDL077C HRP1Q99383 534 aaKnown RBP1.01□□□□□ -2.25
VAM6YDL077C RPS9AO13516 197 aaKnown RBP1□□□□□ -2.25
VAM6YDL077C SEC4P07560 215 aaKnown RBP1□□□□□ -2.25
VAM6YDL077C YPR170W-BP0C5R9 85 aa1□□□□□ -2.25
VAM6YDL077C SST2P11972 698 aaKnown RBP1□□□□□ -2.25
VAM6YDL077C UNG1P12887 359 aa1□□□□□ -2.25
VAM6YDL077C ARO3P14843 370 aaKnown RBP1□□□□□ -2.25
VAM6YDL077C URA6P15700 204 aa1□□□□□ -2.25
VAM6YDL077C ERD1P16151 362 aa1□□□□□ -2.25
VAM6YDL077C PET9P18239 318 aaKnown RBP1□□□□□ -2.25
VAM6YDL077C GLN3P18494 730 aa1□□□□□ -2.25
VAM6YDL077C MAG1P22134 296 aaKnown RBP1□□□□□ -2.25
VAM6YDL077C NPR1P22211 790 aa1□□□□□ -2.25
VAM6YDL077C URE2P23202 354 aaKnown RBP1□□□□□ -2.25
VAM6YDL077C NFS1P25374 497 aa1□□□□□ -2.25
VAM6YDL077C MUD1P32605 298 aaKnown RBP1□□□□□ -2.25
VAM6YDL077C MDL1P33310 695 aa1□□□□□ -2.25
VAM6YDL077C YPT53P36019 220 aa1□□□□□ -2.25
VAM6YDL077C YKR051WP36142 418 aa1□□□□□ -2.25
VAM6YDL077C BET3P36149 193 aa1□□□□□ -2.25
VAM6YDL077C YCR087C-AP37263 153 aa1□□□□□ -2.25
VAM6YDL077C HMT1P38074 348 aa1□□□□□ -2.25
VAM6YDL077C RTC2P38279 296 aa1□□□□□ -2.25
VAM6YDL077C MTC4P38335 694 aaKnown RBP1□□□□□ -2.25
VAM6YDL077C KSP1P38691 1029 aaKnown RBP1□□□□□ -2.25
VAM6YDL077C YHR177WP38867 453 aa1□□□□□ -2.25
VAM6YDL077C PNT1P38969 423 aa1□□□□□ -2.25
VAM6YDL077C AVT2P39981 480 aa1□□□□□ -2.25
VAM6YDL077C VRG4P40107 337 aa1□□□□□ -2.25
VAM6YDL077C RRG9P40156 214 aa1□□□□□ -2.25
VAM6YDL077C ATF1P40353 525 aa1□□□□□ -2.25
VAM6YDL077C YIL161WP40449 235 aaKnown RBP1□□□□□ -2.25
VAM6YDL077C AYR1P40471 297 aa1□□□□□ -2.25
VAM6YDL077C SEC24P40482 926 aaKnown RBP1□□□□□ -2.25
VAM6YDL077C PHS1P40857 217 aa1□□□□□ -2.25
VAM6YDL077C GTS1P40956 396 aa1□□□□□ -2.25
VAM6YDL077C SIP4P46954 829 aa1□□□□□ -2.25
VAM6YDL077C YJR154WP47181 346 aa1□□□□□ -2.25
VAM6YDL077C PEX31P53203 462 aa1□□□□□ -2.25
VAM6YDL077C SPC98P53540 846 aa1□□□□□ -2.25
VAM6YDL077C SMM1P53720 384 aaKnown RBP1□□□□□ -2.25
VAM6YDL077C BOR1P53838 576 aa1□□□□□ -2.25
VAM6YDL077C RNH201P53942 307 aa1□□□□□ -2.25
VAM6YDL077C ACT1P60010 375 aaKnown RBP1□□□□□ -2.25
VAM6YDL077C YVH1Q02256 364 aaKnown RBP1□□□□□ -2.25
VAM6YDL077C SPP2Q02521 185 aa1□□□□□ -2.25
VAM6YDL077C TPP1Q03796 238 aa1□□□□□ -2.25
VAM6YDL077C TMN2Q04562 672 aa1□□□□□ -2.25
VAM6YDL077C VBA4Q04602 768 aaKnown RBP1□□□□□ -2.25
VAM6YDL077C YDR286CQ05530 114 aa1□□□□□ -2.25
VAM6YDL077C RIF2Q06208 395 aa1□□□□□ -2.25
VAM6YDL077C MRPL35Q06678 367 aa1□□□□□ -2.25
VAM6YDL077C HBT1Q07653 1046 aaKnown RBP1□□□□□ -2.25
VAM6YDL077C YOR365CQ08844 703 aa1□□□□□ -2.25
VAM6YDL077C TGS1Q12052 315 aa1□□□□□ -2.25
VAM6YDL077C RRG1Q12167 365 aaPredicted RBP1□□□□□ -2.25
VAM6YDL077C TIR4Q12218 487 aaPredicted RBP1□□□□□ -2.25
VAM6YDL077C YGK3Q12222 375 aaPredicted RBP1□□□□□ -2.25
VAM6YDL077C TRM13Q12383 476 aa1□□□□□ -2.25
VAM6YDL077C PNO1Q99216 274 aaKnown RBP1□□□□□ -2.25
VAM6YDL077C THP2O13539 261 aaKnown RBP1□□□□□ -2.25
VAM6YDL077C PHO5P00635 467 aa1□□□□□ -2.25
VAM6YDL077C CDC36P06100 191 aaPredicted RBP1□□□□□ -2.25
VAM6YDL077C SIR2P06700 562 aa1□□□□□ -2.25
VAM6YDL077C CBP1P07252 654 aa1□□□□□ -2.25
VAM6YDL077C PHO2P07269 559 aa1□□□□□ -2.25
VAM6YDL077C ASP3-2P0CX77 362 aa1□□□□□ -2.25
VAM6YDL077C ASP3-3P0CX78 362 aa1□□□□□ -2.25
VAM6YDL077C ASP3-4P0CX79 362 aa1□□□□□ -2.25
VAM6YDL077C ASP3-1P0CZ17 362 aa1□□□□□ -2.25
VAM6YDL077C CBS2P14905 389 aa1□□□□□ -2.25
VAM6YDL077C RPB3P16370 318 aaKnown RBP1□□□□□ -2.25
VAM6YDL077C FUN14P18411 198 aa1□□□□□ -2.25
VAM6YDL077C YCR061WP25639 631 aa1□□□□□ -2.25
VAM6YDL077C ATG15P25641 520 aa1□□□□□ -2.25
VAM6YDL077C INO2P26798 304 aa1□□□□□ -2.25
VAM6YDL077C SYN8P31377 255 aa1□□□□□ -2.25
VAM6YDL077C YKU70P32807 602 aa1□□□□□ -2.25
VAM6YDL077C EMC3P36039 253 aa1□□□□□ -2.25
VAM6YDL077C ATG8P38182 117 aaRIP-Chip data1□□□□□ -2.25not detected
VAM6YDL077C SWC5P38326 303 aa1□□□□□ -2.25
VAM6YDL077C TSL1P38427 1098 aaKnown RBP1□□□□□ -2.25
VAM6YDL077C WSS1P38838 269 aa1□□□□□ -2.25
VAM6YDL077C YEA6P39953 335 aa1□□□□□ -2.25
VAM6YDL077C IRC22P40006 225 aa1□□□□□ -2.25
VAM6YDL077C SMB1P40018 196 aaKnown RBP1□□□□□ -2.25
VAM6YDL077C YMR147WP40218 223 aaKnown RBP1□□□□□ -2.25
VAM6YDL077C PAN6P40459 309 aa1□□□□□ -2.25
VAM6YDL077C YPS6P40583 537 aa1□□□□□ -2.25
VAM6YDL077C QRI7P43122 407 aa1□□□□□ -2.25
VAM6YDL077C ALY2P47029 1046 aa1□□□□□ -2.25
VAM6YDL077C PHO23P50947 330 aa1□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 40.8 ms