RNA–Protein interactions for RNA: YCR096C

HMRA2, Transcript of Silenced copy of a2 at HMR, yeast

Gene HMRA2, Length 360 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HMRA2	YCR096C	DCR2	Q05924	578 aa		0.64	□□□□□ -2.31
HMRA2	YCR096C	YDL144C	Q07589	356 aa		0.64	□□□□□ -2.31
HMRA2	YCR096C	YOL019W	Q08157	551 aa		0.64	□□□□□ -2.31
HMRA2	YCR096C	YOR114W	Q12219	294 aa		0.64	□□□□□ -2.31
HMRA2	YCR096C	YBL112C	Q3E7Y4	105 aa		0.64	□□□□□ -2.31
HMRA2	YCR096C	FKS1	P38631	1876 aa	Known RBP	0.63	□□□□□ -2.31
HMRA2	YCR096C	RPL31A	P0C2H8	113 aa	Known RBP	0.63	□□□□□ -2.31
HMRA2	YCR096C	RPL16B	P26785	198 aa	Known RBP	0.63	□□□□□ -2.31
HMRA2	YCR096C	SMI1	P32566	505 aa		0.63	□□□□□ -2.31
HMRA2	YCR096C	APE4	P38821	490 aa		0.63	□□□□□ -2.31
HMRA2	YCR096C	SUR2	P38992	349 aa		0.63	□□□□□ -2.31
HMRA2	YCR096C	PES4	P39684	611 aa		0.63	□□□□□ -2.31
HMRA2	YCR096C	SEN34	P39707	275 aa		0.63	□□□□□ -2.31
HMRA2	YCR096C	KRE29	P40026	464 aa		0.63	□□□□□ -2.31
HMRA2	YCR096C	UTP25	P40498	721 aa	Known RBP	0.63	□□□□□ -2.31
HMRA2	YCR096C	RCF1	Q03713	159 aa		0.63	□□□□□ -2.31
HMRA2	YCR096C	TVP15	Q03860	143 aa		0.63	□□□□□ -2.31
HMRA2	YCR096C	LOA1	Q06508	300 aa		0.63	□□□□□ -2.31
HMRA2	YCR096C	SAM4	Q08985	325 aa	Known RBP	0.63	□□□□□ -2.31
HMRA2	YCR096C	YOR283W	Q12040	230 aa	Known RBP	0.63	□□□□□ -2.31
HMRA2	YCR096C	APC9	Q12107	265 aa		0.63	□□□□□ -2.31
HMRA2	YCR096C	PAA1	Q12447	191 aa	Known RBP	0.63	□□□□□ -2.31
HMRA2	YCR096C	NUP157	P40064	1391 aa	Known RBP	0.62	□□□□□ -2.31
HMRA2	YCR096C	TOM40	P23644	387 aa	Known RBP	0.62	□□□□□ -2.31
HMRA2	YCR096C	SCO1	P23833	295 aa		0.62	□□□□□ -2.31
HMRA2	YCR096C	VPH1	P32563	840 aa	Known RBP	0.62	□□□□□ -2.31
HMRA2	YCR096C	COT1	P32798	439 aa		0.62	□□□□□ -2.31
HMRA2	YCR096C	POP8	P38208	133 aa		0.62	□□□□□ -2.31
HMRA2	YCR096C	SWC5	P38326	303 aa		0.62	□□□□□ -2.31
HMRA2	YCR096C	SPL2	P38839	148 aa		0.62	□□□□□ -2.31
HMRA2	YCR096C	YGR016W	P53209	190 aa		0.62	□□□□□ -2.31
HMRA2	YCR096C	ABZ2	Q03266	374 aa		0.62	□□□□□ -2.31
HMRA2	YCR096C	CAB5	Q03941	241 aa		0.62	□□□□□ -2.31
HMRA2	YCR096C	MYO5	Q04439	1219 aa	Known RBP	0.62	□□□□□ -2.31
HMRA2	YCR096C	YLL007C	Q07799	665 aa		0.62	□□□□□ -2.31
HMRA2	YCR096C	YPL150W	Q12152	901 aa		0.62	□□□□□ -2.31
HMRA2	YCR096C	ADH3	P07246	375 aa	Known RBP	0.61	□□□□□ -2.31
HMRA2	YCR096C	RRT12	P25381	491 aa		0.61	□□□□□ -2.31
HMRA2	YCR096C	AEP1	P32493	518 aa		0.61	□□□□□ -2.31
HMRA2	YCR096C	GCG1	P32656	232 aa	Known RBP	0.61	□□□□□ -2.31
HMRA2	YCR096C	ARN2	P38724	620 aa		0.61	□□□□□ -2.31
HMRA2	YCR096C	YDR089W	P38966	869 aa		0.61	□□□□□ -2.31
HMRA2	YCR096C	POP2	P39008	433 aa		0.61	□□□□□ -2.31
HMRA2	YCR096C	SHQ1	P40486	507 aa	Predicted RBP	0.61	□□□□□ -2.31
HMRA2	YCR096C	RPE1	P46969	238 aa		0.61	□□□□□ -2.31
HMRA2	YCR096C	GON7	P46984	123 aa		0.61	□□□□□ -2.31
HMRA2	YCR096C	YJR141W	P47172	347 aa	Predicted RBP	0.61	□□□□□ -2.31
HMRA2	YCR096C	MND1	P53102	219 aa		0.61	□□□□□ -2.31
HMRA2	YCR096C	SWC4	P53201	476 aa		0.61	□□□□□ -2.31
HMRA2	YCR096C	RSM27	P53305	110 aa		0.61	□□□□□ -2.31
HMRA2	YCR096C	FMP41	P53889	259 aa	Known RBP	0.61	□□□□□ -2.31
HMRA2	YCR096C	DPP1	Q05521	289 aa		0.61	□□□□□ -2.31
HMRA2	YCR096C	YPR1	Q12458	312 aa		0.61	□□□□□ -2.31
HMRA2	YCR096C	NOT5	Q12514	560 aa	Predicted RBP	0.61	□□□□□ -2.31
HMRA2	YCR096C	IFM1	P25038	676 aa		0.6	□□□□□ -2.31
HMRA2	YCR096C	YCR102C	P25608	368 aa		0.6	□□□□□ -2.31
HMRA2	YCR096C	CAT2	P32796	670 aa	Known RBP	0.6	□□□□□ -2.31
HMRA2	YCR096C	SPT4	P32914	102 aa	Predicted RBP	0.6	□□□□□ -2.31
HMRA2	YCR096C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	0.6	□□□□□ -2.31	not detected
HMRA2	YCR096C	LSM4	P40070	187 aa	Known RBP	0.6	□□□□□ -2.31
HMRA2	YCR096C	YFR054C	P43622	192 aa		0.6	□□□□□ -2.31
HMRA2	YCR096C	RIB4	P50861	169 aa	Predicted RBP	0.6	□□□□□ -2.31
HMRA2	YCR096C	COS6	P53344	381 aa		0.6	□□□□□ -2.31
HMRA2	YCR096C	DBP6	P53734	629 aa	Known RBP	0.6	□□□□□ -2.31
HMRA2	YCR096C	ECM18	Q04623	453 aa		0.6	□□□□□ -2.31
HMRA2	YCR096C	YDR286C	Q05530	114 aa		0.6	□□□□□ -2.31
HMRA2	YCR096C	YPR064W	Q12492	139 aa		0.6	□□□□□ -2.31
HMRA2	YCR096C	IZH4	Q99393	312 aa		0.6	□□□□□ -2.31
HMRA2	YCR096C	CDC37	P06101	506 aa	Known RBP	0.59	□□□□□ -2.31
HMRA2	YCR096C	PET494	P07390	489 aa	Predicted RBP	0.59	□□□□□ -2.31
HMRA2	YCR096C	CAR2	P07991	424 aa	Known RBP	0.59	□□□□□ -2.31
HMRA2	YCR096C	OSM1	P21375	501 aa	Known RBP	0.59	□□□□□ -2.31
HMRA2	YCR096C	ERG2	P32352	222 aa		0.59	□□□□□ -2.31
HMRA2	YCR096C	RPS0A	P32905	252 aa	Known RBP	0.59	□□□□□ -2.31
HMRA2	YCR096C	SWD2	P36104	329 aa	Predicted RBP	0.59	□□□□□ -2.31
HMRA2	YCR096C	RPC37	P36121	282 aa		0.59	□□□□□ -2.31
HMRA2	YCR096C	UIP5	P36137	443 aa		0.59	□□□□□ -2.31
HMRA2	YCR096C	PHO89	P38361	574 aa		0.59	□□□□□ -2.31
HMRA2	YCR096C	END3	P39013	349 aa		0.59	□□□□□ -2.31
HMRA2	YCR096C	YML018C	Q03730	393 aa		0.59	□□□□□ -2.31
HMRA2	YCR096C	YMR114C	Q04471	368 aa	Known RBP	0.59	□□□□□ -2.31
HMRA2	YCR096C	TY3A-G	Q12173	290 aa		0.59	□□□□□ -2.31
HMRA2	YCR096C	TY3A-I	Q99219	290 aa		0.59	□□□□□ -2.31
HMRA2	YCR096C	COS2	P0CX12	379 aa		0.58	□□□□□ -2.32
HMRA2	YCR096C	COS3	P0CX13	379 aa		0.58	□□□□□ -2.32
HMRA2	YCR096C	TFS1	P14306	219 aa		0.58	□□□□□ -2.32
HMRA2	YCR096C	KRE6	P32486	720 aa		0.58	□□□□□ -2.32
HMRA2	YCR096C	YOR062C	P36025	268 aa		0.58	□□□□□ -2.32
HMRA2	YCR096C	COG3	P40094	801 aa		0.58	□□□□□ -2.32
HMRA2	YCR096C	PRO2	P54885	456 aa	Known RBP	0.58	□□□□□ -2.32
HMRA2	YCR096C	VPS60	Q03390	229 aa		0.58	□□□□□ -2.32
HMRA2	YCR096C	YMR209C	Q03648	457 aa		0.58	□□□□□ -2.32
HMRA2	YCR096C	VPS20	Q04272	221 aa		0.58	□□□□□ -2.32
HMRA2	YCR096C	SPO77	Q06134	477 aa		0.58	□□□□□ -2.32
HMRA2	YCR096C	POM33	Q12164	279 aa		0.58	□□□□□ -2.32
HMRA2	YCR096C	RRP42	Q12277	265 aa	Predicted RBP	0.58	□□□□□ -2.32
HMRA2	YCR096C	YPL247C	Q12523	523 aa		0.58	□□□□□ -2.32
HMRA2	YCR096C	POX1	P13711	748 aa		0.57	□□□□□ -2.32
HMRA2	YCR096C	MSS116	P15424	664 aa	Known RBP	0.57	□□□□□ -2.32
HMRA2	YCR096C	SUA5	P32579	426 aa		0.57	□□□□□ -2.32

Retrieved 100 of 5,963 RNA–protein pairs in 38.3 ms