RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W PET494P07390 489 aaPredicted RBP1.75□□□□□ -2.13
SNC1YAL030W ASP3-2P0CX77 362 aa1.75□□□□□ -2.13
SNC1YAL030W ASP3-3P0CX78 362 aa1.75□□□□□ -2.13
SNC1YAL030W ASP3-4P0CX79 362 aa1.75□□□□□ -2.13
SNC1YAL030W ASP3-1P0CZ17 362 aa1.75□□□□□ -2.13
SNC1YAL030W DAL81P21657 970 aa1.75□□□□□ -2.13
SNC1YAL030W RNA15P25299 296 aaPredicted RBP1.75□□□□□ -2.13
SNC1YAL030W YCR016WP25617 290 aaKnown RBP1.75□□□□□ -2.13
SNC1YAL030W RPS5P26783 225 aaKnown RBP1.75□□□□□ -2.13
SNC1YAL030W KRE6P32486 720 aa1.75□□□□□ -2.13
SNC1YAL030W SRB4P32569 687 aa1.75□□□□□ -2.13
SNC1YAL030W SPS19P32573 292 aaKnown RBP1.75□□□□□ -2.13
SNC1YAL030W YEL045CP32616 141 aa1.75□□□□□ -2.13
SNC1YAL030W GPX1P36014 167 aa1.75□□□□□ -2.13
SNC1YAL030W AIM29P36154 155 aa1.75□□□□□ -2.13
SNC1YAL030W MRPL27P36526 146 aaPredicted RBP1.75□□□□□ -2.13
SNC1YAL030W MBA1P38300 278 aa1.75□□□□□ -2.13
SNC1YAL030W GGC1P38988 300 aa1.75□□□□□ -2.13
SNC1YAL030W RRG9P40156 214 aa1.75□□□□□ -2.13
SNC1YAL030W MSS2P40990 351 aa1.75□□□□□ -2.13
SNC1YAL030W STB1P42845 420 aa1.75□□□□□ -2.13
SNC1YAL030W MIC19P43594 170 aa1.75□□□□□ -2.13
SNC1YAL030W ASG7P46993 209 aa1.75□□□□□ -2.13
SNC1YAL030W YGL039WP53183 348 aaKnown RBP1.75□□□□□ -2.13
SNC1YAL030W MRX11Q03079 207 aa1.75□□□□□ -2.13
SNC1YAL030W API2Q04413 109 aa1.75□□□□□ -2.13
SNC1YAL030W YDR115WQ04598 105 aa1.75□□□□□ -2.13
SNC1YAL030W SEC10Q06245 871 aa1.75□□□□□ -2.13
SNC1YAL030W TAZ1Q06510 381 aa1.75□□□□□ -2.13
SNC1YAL030W CTR3Q06686 241 aa1.75□□□□□ -2.13
SNC1YAL030W SRO7Q12038 1033 aa1.75□□□□□ -2.13
SNC1YAL030W YOR029WQ12243 111 aa1.75□□□□□ -2.13
SNC1YAL030W TRM10Q12400 293 aa1.75□□□□□ -2.13
SNC1YAL030W CFT1Q06632 1357 aaKnown RBP1.74□□□□□ -2.13
SNC1YAL030W JIP3O13555 125 aa1.74□□□□□ -2.13
SNC1YAL030W RPO26P20435 155 aa1.74□□□□□ -2.13
SNC1YAL030W VPS3P23643 1011 aa1.74□□□□□ -2.13
SNC1YAL030W IES6P32617 166 aa1.74□□□□□ -2.13
SNC1YAL030W ALK2P32789 676 aaPredicted RBP1.74□□□□□ -2.13
SNC1YAL030W CDC13P32797 924 aaKnown RBP1.74□□□□□ -2.13
SNC1YAL030W RFT1P38206 574 aaPredicted RBP1.74□□□□□ -2.13
SNC1YAL030W YBR062CP38239 180 aa1.74□□□□□ -2.13
SNC1YAL030W WSC4P38739 605 aa1.74□□□□□ -2.13
SNC1YAL030W PRE5P40302 234 aaKnown RBP1.74□□□□□ -2.13
SNC1YAL030W RPL10P41805 221 aaKnown RBP1.74□□□□□ -2.13
SNC1YAL030W HIT1P46973 164 aa1.74□□□□□ -2.13
SNC1YAL030W YJR012CP47087 207 aa1.74□□□□□ -2.13
SNC1YAL030W YPS5P53057 165 aa1.74□□□□□ -2.13
SNC1YAL030W COG7P53195 279 aa1.74□□□□□ -2.13
SNC1YAL030W MAL13P53338 473 aa1.74□□□□□ -2.13
SNC1YAL030W PGA2P53903 129 aa1.74□□□□□ -2.13
SNC1YAL030W CDC14Q00684 551 aa1.74□□□□□ -2.13
SNC1YAL030W VPS60Q03390 229 aa1.74□□□□□ -2.13
SNC1YAL030W MHR1Q06630 226 aa1.74□□□□□ -2.13
SNC1YAL030W YOR292CQ08743 309 aa1.74□□□□□ -2.13
SNC1YAL030W PER33Q12144 273 aa1.74□□□□□ -2.13
SNC1YAL030W ADF1Q2V2Q1 113 aa1.74□□□□□ -2.13
SNC1YAL030W TPI1P00942 248 aaKnown RBP1.73□□□□□ -2.13
SNC1YAL030W CBP6P07253 162 aaPredicted RBP1.73□□□□□ -2.13
SNC1YAL030W REV1P12689 985 aa1.73□□□□□ -2.13
SNC1YAL030W HSP26P15992 214 aaKnown RBP RIP-Chip data1.73□□□□□ -2.13not detected
SNC1YAL030W CDC42P19073 191 aa1.73□□□□□ -2.13
SNC1YAL030W EPT1P22140 391 aa1.73□□□□□ -2.13
SNC1YAL030W HOM6P31116 359 aaKnown RBP1.73□□□□□ -2.13
SNC1YAL030W YKT6P36015 200 aaKnown RBP1.73□□□□□ -2.13
SNC1YAL030W MED8P38304 223 aa1.73□□□□□ -2.13
SNC1YAL030W YHI9P38765 294 aa1.73□□□□□ -2.13
SNC1YAL030W YER184CP39961 794 aa1.73□□□□□ -2.13
SNC1YAL030W KRE29P40026 464 aa1.73□□□□□ -2.13
SNC1YAL030W YFL064CP43540 174 aa1.73□□□□□ -2.13
SNC1YAL030W HOC1P47124 396 aa1.73□□□□□ -2.13
SNC1YAL030W PEX31P53203 462 aa1.73□□□□□ -2.13
SNC1YAL030W NOP13P53883 403 aaKnown RBP RIP-Chip data1.73□□□□□ -2.13not detected
SNC1YAL030W SWS2P53937 143 aa1.73□□□□□ -2.13
SNC1YAL030W YLR152CP54072 576 aa1.73□□□□□ -2.13
SNC1YAL030W RPL21AQ02753 160 aaKnown RBP1.73□□□□□ -2.13
SNC1YAL030W SDC1Q03323 175 aa1.73□□□□□ -2.13
SNC1YAL030W YDR209CQ03480 137 aa1.73□□□□□ -2.13
SNC1YAL030W TSA2Q04120 196 aa1.73□□□□□ -2.13
SNC1YAL030W MYO5Q04439 1219 aaKnown RBP1.73□□□□□ -2.13
SNC1YAL030W DIB1Q06819 143 aaPredicted RBP1.73□□□□□ -2.13
SNC1YAL030W YDL144CQ07589 356 aa1.73□□□□□ -2.13
SNC1YAL030W FKS1P38631 1876 aaKnown RBP1.73□□□□□ -2.13
SNC1YAL030W PSK1P31374 1356 aa1.72□□□□□ -2.13
SNC1YAL030W CHD1P32657 1468 aa1.72□□□□□ -2.13
SNC1YAL030W RPL24BP24000 155 aaKnown RBP1.72□□□□□ -2.13
SNC1YAL030W ATG15P25641 520 aa1.72□□□□□ -2.13
SNC1YAL030W DOA4P32571 926 aa1.72□□□□□ -2.13
SNC1YAL030W MRPL3P36516 390 aa1.72□□□□□ -2.13
SNC1YAL030W FRM2P37261 193 aa1.72□□□□□ -2.13
SNC1YAL030W SMP1P38128 452 aa1.72□□□□□ -2.13
SNC1YAL030W LDB7P38210 180 aa1.72□□□□□ -2.13
SNC1YAL030W ATG12P38316 186 aa1.72□□□□□ -2.13
SNC1YAL030W ECM34P38728 170 aa1.72□□□□□ -2.13
SNC1YAL030W SMB1P40018 196 aaKnown RBP1.72□□□□□ -2.13
SNC1YAL030W THO1P40040 218 aaKnown RBP1.72□□□□□ -2.13
SNC1YAL030W SER33P40510 469 aa1.72□□□□□ -2.13
SNC1YAL030W YRB1P41920 201 aaKnown RBP1.72□□□□□ -2.13
SNC1YAL030W GLG2P47011 380 aa1.72□□□□□ -2.13
SNC1YAL030W RPC17P47076 161 aa1.72□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 44.8 ms