RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 TELO2Q9Y4R8 837 aa7.42□□□□□ -1.22
UPF3B-205ENST00000636792 GRIN2DO15399 1336 aa7.42□□□□□ -1.22
UPF3B-205ENST00000636792 RALGAPA2Q2PPJ7 1873 aa7.41□□□□□ -1.22
UPF3B-205ENST00000636792 MYMKA6NI61 221 aa7.41□□□□□ -1.22
UPF3B-205ENST00000636792 TREHO43280 583 aa7.41□□□□□ -1.22
UPF3B-205ENST00000636792 B4GALT4O60513 344 aa7.41□□□□□ -1.22
UPF3B-205ENST00000636792 SSBP05455 408 aaKnown RBP eCLIP7.41□□□□□ -1.22
UPF3B-205ENST00000636792 PFKMP08237 780 aa7.41□□□□□ -1.22
UPF3B-205ENST00000636792 CLTBP09497 229 aa7.41□□□□□ -1.22
UPF3B-205ENST00000636792 PTGS1P23219 599 aa7.41□□□□□ -1.22
UPF3B-205ENST00000636792 AXLP30530 894 aa7.41□□□□□ -1.22
UPF3B-205ENST00000636792 ARL2P36404 184 aa7.41□□□□□ -1.22
UPF3B-205ENST00000636792 PHKA2P46019 1235 aa7.41□□□□□ -1.22
UPF3B-205ENST00000636792 NCKAP1LP55160 1127 aa7.41□□□□□ -1.22
UPF3B-205ENST00000636792 SNRPFP62306 86 aaKnown RBP7.41□□□□□ -1.22
UPF3B-205ENST00000636792 ASIC1P78348 528 aa7.41□□□□□ -1.22
UPF3B-205ENST00000636792 MAPK7Q13164 816 aa7.41□□□□□ -1.22
UPF3B-205ENST00000636792 GIT2Q14161 759 aa7.41□□□□□ -1.22
UPF3B-205ENST00000636792 ARSHQ5FYA8 562 aa7.41□□□□□ -1.22
UPF3B-205ENST00000636792 SRGAP1Q7Z6B7 1085 aa7.41□□□□□ -1.22
UPF3B-205ENST00000636792 ZBTB8OSQ8IWT0 167 aa7.41□□□□□ -1.22
UPF3B-205ENST00000636792 LRRC15Q8TF66 581 aa7.41□□□□□ -1.22
UPF3B-205ENST00000636792 SMARCE1Q969G3 411 aa7.41□□□□□ -1.22
UPF3B-205ENST00000636792 PAGE5Q96GU1 130 aa7.41□□□□□ -1.22
UPF3B-205ENST00000636792 PAWRQ96IZ0 340 aaKnown RBP7.41□□□□□ -1.22
UPF3B-205ENST00000636792 RUSC1Q9BVN2 902 aa7.41□□□□□ -1.22
UPF3B-205ENST00000636792 POLR3FQ9H1D9 316 aaPredicted RBP7.41□□□□□ -1.22
UPF3B-205ENST00000636792 EXOC1Q9NV70 894 aa7.41□□□□□ -1.22
UPF3B-205ENST00000636792 MAP10Q9P2G4 905 aa7.41□□□□□ -1.22
UPF3B-205ENST00000636792 CGNQ9P2M7 1197 aaKnown RBP7.41□□□□□ -1.22
UPF3B-205ENST00000636792 ARHGAP28Q9P2N2 729 aa7.41□□□□□ -1.22
UPF3B-205ENST00000636792 TRPV2Q9Y5S1 764 aa7.41□□□□□ -1.22
UPF3B-205ENST00000636792 MICAL3Q7RTP6 2002 aa7.4□□□□□ -1.22
UPF3B-205ENST00000636792 KIAA0355O15063 1070 aa7.4□□□□□ -1.22
UPF3B-205ENST00000636792 KIAA0391O15091 583 aaKnown RBP7.4□□□□□ -1.22
UPF3B-205ENST00000636792 TRAK2O60296 914 aa7.4□□□□□ -1.22
UPF3B-205ENST00000636792 HIP1RO75146 1068 aa7.4□□□□□ -1.22
UPF3B-205ENST00000636792 CAVIN2O95810 425 aa7.4□□□□□ -1.22
UPF3B-205ENST00000636792 PIGRP01833 764 aa7.4□□□□□ -1.22
UPF3B-205ENST00000636792 PRKCSHP14314 528 aaPredicted RBP7.4□□□□□ -1.22
UPF3B-205ENST00000636792 SFPQP23246 707 aaKnown RBP eCLIP7.4□□□□□ -1.22
UPF3B-205ENST00000636792 FSHRP23945 695 aa7.4□□□□□ -1.22
UPF3B-205ENST00000636792 SARSP49591 514 aaKnown RBP7.4□□□□□ -1.22
UPF3B-205ENST00000636792 GPC3P51654 580 aa7.4□□□□□ -1.22
UPF3B-205ENST00000636792 CRYBB1P53674 252 aaPredicted RBP7.4□□□□□ -1.22
UPF3B-205ENST00000636792 IGBP1P78318 339 aa7.4□□□□□ -1.22
UPF3B-205ENST00000636792 MRPS6P82932 125 aaKnown RBP7.4□□□□□ -1.22
UPF3B-205ENST00000636792 MGAT3Q09327 533 aa7.4□□□□□ -1.22
UPF3B-205ENST00000636792 LAMTOR4Q0VGL1 99 aa7.4□□□□□ -1.22
UPF3B-205ENST00000636792 CAPSQ13938 189 aa7.4□□□□□ -1.22
UPF3B-205ENST00000636792 NFKBIBQ15653 356 aa7.4□□□□□ -1.22
UPF3B-205ENST00000636792 FAM187BQ17R55 369 aa7.4□□□□□ -1.22
UPF3B-205ENST00000636792 BMT2Q1RMZ1 405 aa7.4□□□□□ -1.22
UPF3B-205ENST00000636792 TRIM71Q2Q1W2 868 aaKnown RBP7.4□□□□□ -1.22
UPF3B-205ENST00000636792 FAM26FQ5R3K3 315 aa7.4□□□□□ -1.22
UPF3B-205ENST00000636792 APBB1IPQ7Z5R6 666 aaPredicted RBP7.4□□□□□ -1.22
UPF3B-205ENST00000636792 FAM178BQ8IXR5 827 aa7.4□□□□□ -1.22
UPF3B-205ENST00000636792 KIAA0319LQ8IZA0 1049 aa7.4□□□□□ -1.22
UPF3B-205ENST00000636792 DAW1Q8N136 415 aa7.4□□□□□ -1.22
UPF3B-205ENST00000636792 METTL13Q8N6R0 699 aa7.4□□□□□ -1.22
UPF3B-205ENST00000636792 DEPTORQ8TB45 409 aa7.4□□□□□ -1.22
UPF3B-205ENST00000636792 GPT2Q8TD30 523 aa7.4□□□□□ -1.22
UPF3B-205ENST00000636792 DIS3LQ8TF46 1054 aaKnown RBP7.4□□□□□ -1.22
UPF3B-205ENST00000636792 TMEM174Q8WUU8 243 aa7.4□□□□□ -1.22
UPF3B-205ENST00000636792 APBB2Q92870 758 aa7.4□□□□□ -1.22
UPF3B-205ENST00000636792 CCDC51Q96ER9 411 aa7.4□□□□□ -1.22
UPF3B-205ENST00000636792 SCARF2Q96GP6 870 aaPredicted RBP7.4□□□□□ -1.22
UPF3B-205ENST00000636792 CTAGE1Q96RT6 745 aa7.4□□□□□ -1.22
UPF3B-205ENST00000636792 GCOM2Q9BZD3 368 aaPredicted RBP7.4□□□□□ -1.22
UPF3B-205ENST00000636792 TMEM206Q9H813 350 aa7.4□□□□□ -1.22
UPF3B-205ENST00000636792 PANK4Q9NVE7 773 aa7.4□□□□□ -1.22
UPF3B-205ENST00000636792 PRMT7Q9NVM4 692 aaPredicted RBP7.4□□□□□ -1.22
UPF3B-205ENST00000636792 SUCLA2Q9P2R7 463 aaPredicted RBP7.4□□□□□ -1.22
UPF3B-205ENST00000636792 TBX21Q9UL17 535 aa7.4□□□□□ -1.22
UPF3B-205ENST00000636792 EXOC7Q9UPT5 735 aa7.4□□□□□ -1.22
UPF3B-205ENST00000636792 AKT3Q9Y243 479 aa7.4□□□□□ -1.22
UPF3B-205ENST00000636792 ZMYM2Q9UBW7 1377 aa7.4□□□□□ -1.22
UPF3B-205ENST00000636792 ZBTB39O15060 712 aa7.39□□□□□ -1.23
UPF3B-205ENST00000636792 KLRC4O43908 158 aa7.39□□□□□ -1.23
UPF3B-205ENST00000636792 EFCAB14O75071 495 aa7.39□□□□□ -1.23
UPF3B-205ENST00000636792 F12P00748 615 aaPredicted RBP7.39□□□□□ -1.23
UPF3B-205ENST00000636792 MYCP01106 439 aaPredicted RBP7.39□□□□□ -1.23
UPF3B-205ENST00000636792 RPN1P04843 607 aaKnown RBP7.39□□□□□ -1.23
UPF3B-205ENST00000636792 CKBP12277 381 aa7.39□□□□□ -1.23
UPF3B-205ENST00000636792 IDEP14735 1019 aa7.39□□□□□ -1.23
UPF3B-205ENST00000636792 DARSP14868 501 aaKnown RBP7.39□□□□□ -1.23
UPF3B-205ENST00000636792 SELPP16109 830 aa7.39□□□□□ -1.23
UPF3B-205ENST00000636792 EN2P19622 333 aaPredicted RBP7.39□□□□□ -1.23
UPF3B-205ENST00000636792 GLRA2P23416 452 aa7.39□□□□□ -1.23
UPF3B-205ENST00000636792 AFMP43652 599 aa7.39□□□□□ -1.23
UPF3B-205ENST00000636792 NPTX2P47972 431 aa7.39□□□□□ -1.23
UPF3B-205ENST00000636792 CLCN3P51790 818 aa7.39□□□□□ -1.23
UPF3B-205ENST00000636792 PTENP60484 403 aa7.39□□□□□ -1.23
UPF3B-205ENST00000636792 NCBP1Q09161 790 aaKnown RBP7.39□□□□□ -1.23
UPF3B-205ENST00000636792 FAAP100Q0VG06 881 aa7.39□□□□□ -1.23
UPF3B-205ENST00000636792 COASYQ13057 564 aa7.39□□□□□ -1.23
UPF3B-205ENST00000636792 STIM1Q13586 685 aa7.39□□□□□ -1.23
UPF3B-205ENST00000636792 MAPK6Q16659 721 aa7.39□□□□□ -1.23
UPF3B-205ENST00000636792 KYAT1Q16773 422 aa7.39□□□□□ -1.23
UPF3B-205ENST00000636792 TRIM60Q495X7 471 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms