RNA–Protein interactions for RNA: ENST00000636681.1

CLN5-213, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 1,791 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-213ENST00000636681 IBSPP21815 317 aaPredicted RBP11.67□□□□□ -0.54
CLN5-213ENST00000636681 NR2F2P24468 414 aa11.67□□□□□ -0.54
CLN5-213ENST00000636681 TNFSF9P41273 254 aa11.67□□□□□ -0.54
CLN5-213ENST00000636681 LIG4P49917 911 aa11.67□□□□□ -0.54
CLN5-213ENST00000636681 EFNA5P52803 228 aa11.67□□□□□ -0.54
CLN5-213ENST00000636681 OSTNP61366 133 aa11.67□□□□□ -0.54
CLN5-213ENST00000636681 POU5F1BQ06416 359 aa11.67□□□□□ -0.54
CLN5-213ENST00000636681 NFX1Q12986 1120 aaKnown RBP11.67□□□□□ -0.54
CLN5-213ENST00000636681 FBXO47Q5MNV8 452 aa11.67□□□□□ -0.54
CLN5-213ENST00000636681 SRGAP1Q7Z6B7 1085 aa11.67□□□□□ -0.54
CLN5-213ENST00000636681 RPAINQ86UA6 219 aa11.67□□□□□ -0.54
CLN5-213ENST00000636681 PLEKHO2Q8TD55 490 aa11.67□□□□□ -0.54
CLN5-213ENST00000636681 TRIM43Q96BQ3 446 aaPredicted RBP11.67□□□□□ -0.54
CLN5-213ENST00000636681 VWCEQ96DN2 955 aa11.67□□□□□ -0.54
CLN5-213ENST00000636681 NFKBIZQ9BYH8 718 aa11.67□□□□□ -0.54
CLN5-213ENST00000636681 MICAL3Q7RTP6 2002 aa11.66□□□□□ -0.54
CLN5-213ENST00000636681 PDCD11Q14690 1871 aaKnown RBP11.66□□□□□ -0.54
CLN5-213ENST00000636681 CCDC85CA6NKD9 419 aa11.66□□□□□ -0.54
CLN5-213ENST00000636681 BECN2A8MW95 431 aa11.66□□□□□ -0.54
CLN5-213ENST00000636681 DCDC2CA8MYV0 355 aa11.66□□□□□ -0.54
CLN5-213ENST00000636681 MEFVO15553 781 aaPredicted RBP11.66□□□□□ -0.54
CLN5-213ENST00000636681 AKAP3O75969 853 aa11.66□□□□□ -0.54
CLN5-213ENST00000636681 PIGRP01833 764 aa11.66□□□□□ -0.54
CLN5-213ENST00000636681 MATR3P43243 847 aaKnown RBP eCLIP11.66□□□□□ -0.54
CLN5-213ENST00000636681 ACOT2P49753 483 aa11.66□□□□□ -0.54
CLN5-213ENST00000636681 ADAM9Q13443 819 aa11.66□□□□□ -0.54
CLN5-213ENST00000636681 ALCAMQ13740 583 aa11.66□□□□□ -0.54
CLN5-213ENST00000636681 GSE1Q14687 1217 aa11.66□□□□□ -0.54
CLN5-213ENST00000636681 TMEM132AQ24JP5 1023 aa11.66□□□□□ -0.54
CLN5-213ENST00000636681 FAM26DQ5JW98 314 aa11.66□□□□□ -0.54
CLN5-213ENST00000636681 ATF7IP2Q5U623 682 aa11.66□□□□□ -0.54
CLN5-213ENST00000636681 CDKAL1Q5VV42 579 aa11.66□□□□□ -0.54
CLN5-213ENST00000636681 CEP135Q66GS9 1140 aa11.66□□□□□ -0.54
CLN5-213ENST00000636681 SCARA3Q6AZY7 606 aa11.66□□□□□ -0.54
CLN5-213ENST00000636681 ARMCX5Q6P1M9 558 aa11.66□□□□□ -0.54
CLN5-213ENST00000636681 STXBP4Q6ZWJ1 553 aa11.66□□□□□ -0.54
CLN5-213ENST00000636681 RSPH3Q86UC2 560 aa11.66□□□□□ -0.54
CLN5-213ENST00000636681 CBWD2Q8IUF1 395 aa11.66□□□□□ -0.54
CLN5-213ENST00000636681 POMGNT1Q8WZA1 660 aa11.66□□□□□ -0.54
CLN5-213ENST00000636681 HVCN1Q96D96 273 aa11.66□□□□□ -0.54
CLN5-213ENST00000636681 ANP32EQ9BTT0 268 aa11.66□□□□□ -0.54
CLN5-213ENST00000636681 NAT10Q9H0A0 1025 aaKnown RBP11.66□□□□□ -0.54
CLN5-213ENST00000636681 TMX1Q9H3N1 280 aa11.66□□□□□ -0.54
CLN5-213ENST00000636681 TMEM206Q9H813 350 aa11.66□□□□□ -0.54
CLN5-213ENST00000636681 PTPRHQ9HD43 1115 aa11.66□□□□□ -0.54
CLN5-213ENST00000636681 PRDM5Q9NQX1 630 aaPredicted RBP11.66□□□□□ -0.54
CLN5-213ENST00000636681 PRMT7Q9NVM4 692 aaPredicted RBP11.66□□□□□ -0.54
CLN5-213ENST00000636681 DMAC2Q9NW81 257 aa11.66□□□□□ -0.54
CLN5-213ENST00000636681 HSPBP1Q9NZL4 362 aa11.66□□□□□ -0.54
CLN5-213ENST00000636681 TBX21Q9UL17 535 aa11.66□□□□□ -0.54
CLN5-213ENST00000636681 HES2Q9Y543 173 aa11.66□□□□□ -0.54
CLN5-213ENST00000636681 RANBP2P49792 3224 aaKnown RBP11.65□□□□□ -0.54
CLN5-213ENST00000636681 CNTNAP2Q9UHC6 1331 aa11.65□□□□□ -0.54
CLN5-213ENST00000636681 PTPRSQ13332 1948 aa11.65□□□□□ -0.54
CLN5-213ENST00000636681 MEIS3P2A8K0S8 358 aa11.65□□□□□ -0.54
CLN5-213ENST00000636681 M0QZ92 97 aa11.65□□□□□ -0.54
CLN5-213ENST00000636681 IKBKBO14920 756 aa11.65□□□□□ -0.54
CLN5-213ENST00000636681 FAM189A1O60320 539 aa11.65□□□□□ -0.54
CLN5-213ENST00000636681 RPS6KA5O75582 802 aa11.65□□□□□ -0.54
CLN5-213ENST00000636681 ERLIN2O94905 339 aa11.65□□□□□ -0.54
CLN5-213ENST00000636681 ZNF18P17022 549 aa11.65□□□□□ -0.54
CLN5-213ENST00000636681 PROZP22891 400 aa11.65□□□□□ -0.54
CLN5-213ENST00000636681 LRRC63Q05C16 580 aa11.65□□□□□ -0.54
CLN5-213ENST00000636681 TPD52L1Q16890 204 aaPredicted RBP11.65□□□□□ -0.54
CLN5-213ENST00000636681 FAM187BQ17R55 369 aa11.65□□□□□ -0.54
CLN5-213ENST00000636681 C1orf53Q5VUE5 145 aa11.65□□□□□ -0.54
CLN5-213ENST00000636681 CRELD2Q6UXH1 353 aaPredicted RBP11.65□□□□□ -0.54
CLN5-213ENST00000636681 LRRC8DQ7L1W4 858 aa11.65□□□□□ -0.54
CLN5-213ENST00000636681 ZC3H3Q8IXZ2 948 aaKnown RBP11.65□□□□□ -0.54
CLN5-213ENST00000636681 THNSL1Q8IYQ7 743 aa11.65□□□□□ -0.54
CLN5-213ENST00000636681 TSG101Q99816 390 aa11.65□□□□□ -0.54
CLN5-213ENST00000636681 TCHPQ9BT92 498 aa11.65□□□□□ -0.54
CLN5-213ENST00000636681 MRPL4Q9BYD3 311 aaKnown RBP11.65□□□□□ -0.54
CLN5-213ENST00000636681 CDT1Q9H211 546 aa11.65□□□□□ -0.54
CLN5-213ENST00000636681 HIPK3Q9H422 1215 aa11.65□□□□□ -0.54
CLN5-213ENST00000636681 ERVK-5Q9HDB9 667 aa11.65□□□□□ -0.54
CLN5-213ENST00000636681 TMEM39AQ9NV64 488 aa11.65□□□□□ -0.54
CLN5-213ENST00000636681 PADI3Q9ULW8 664 aa11.65□□□□□ -0.54
CLN5-213ENST00000636681 PIN4Q9Y237 131 aaKnown RBP11.65□□□□□ -0.54
CLN5-213ENST00000636681 A0A0B4J269 797 aa11.64□□□□□ -0.55
CLN5-213ENST00000636681 BICDL2A1A5D9 508 aa11.64□□□□□ -0.55
CLN5-213ENST00000636681 H0YCG3 227 aa11.64□□□□□ -0.55
CLN5-213ENST00000636681 TLR3O15455 904 aaKnown RBP11.64□□□□□ -0.55
CLN5-213ENST00000636681 CALUO43852 315 aaPredicted RBP11.64□□□□□ -0.55
CLN5-213ENST00000636681 NPTXRO95502 500 aa11.64□□□□□ -0.55
CLN5-213ENST00000636681 CLTBP09497 229 aa11.64□□□□□ -0.55
CLN5-213ENST00000636681 SELPP16109 830 aa11.64□□□□□ -0.55
CLN5-213ENST00000636681 DLG4P78352 724 aa11.64□□□□□ -0.55
CLN5-213ENST00000636681 PLCB2Q00722 1185 aa11.64□□□□□ -0.55
CLN5-213ENST00000636681 EDRF1Q3B7T1 1238 aa11.64□□□□□ -0.55
CLN5-213ENST00000636681 UBXN11Q5T124 520 aa11.64□□□□□ -0.55
CLN5-213ENST00000636681 TSHZ1Q6ZSZ6 1077 aa11.64□□□□□ -0.55
CLN5-213ENST00000636681 HS2ST1Q7LGA3 356 aa11.64□□□□□ -0.55
CLN5-213ENST00000636681 APTXQ7Z2E3 356 aaKnown RBP11.64□□□□□ -0.55
CLN5-213ENST00000636681 RTN4RL1Q86UN2 441 aaPredicted RBP11.64□□□□□ -0.55
CLN5-213ENST00000636681 SLC17A8Q8NDX2 589 aa11.64□□□□□ -0.55
CLN5-213ENST00000636681 LINC01599Q8WXQ3 324 aa11.64□□□□□ -0.55
CLN5-213ENST00000636681 KCNN1Q92952 543 aa11.64□□□□□ -0.55
CLN5-213ENST00000636681 CNOT6LQ96LI5 555 aaKnown RBP11.64□□□□□ -0.55
CLN5-213ENST00000636681 TOX2Q96NM4 488 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms