RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 ORC1Q13415 861 aa10.84□□□□□ -0.67
SMARCA1-205ENST00000617310 PLCB4Q15147 1175 aa10.84□□□□□ -0.67
SMARCA1-205ENST00000617310 EARS2Q5JPH6 523 aaKnown RBP10.84□□□□□ -0.67
SMARCA1-205ENST00000617310 TTC19Q6DKK2 380 aaPredicted RBP10.84□□□□□ -0.67
SMARCA1-205ENST00000617310 CCDC13Q8IYE1 715 aa10.84□□□□□ -0.67
SMARCA1-205ENST00000617310 RILPQ96NA2 401 aa10.84□□□□□ -0.67
SMARCA1-205ENST00000617310 MOSPD1Q9UJG1 213 aa10.84□□□□□ -0.67
SMARCA1-205ENST00000617310 ADAMTSL3P82987 1691 aa10.84□□□□□ -0.67
SMARCA1-205ENST00000617310 PDXKO00764 312 aa10.84□□□□□ -0.67
SMARCA1-205ENST00000617310 GSTA1P08263 222 aa10.84□□□□□ -0.67
SMARCA1-205ENST00000617310 GSTA2P09210 222 aa10.84□□□□□ -0.67
SMARCA1-205ENST00000617310 CASP4P49662 377 aa10.84□□□□□ -0.67
SMARCA1-205ENST00000617310 ARL13BQ3SXY8 428 aa10.84□□□□□ -0.67
SMARCA1-205ENST00000617310 DEFB128Q7Z7B8 93 aa10.84□□□□□ -0.67
SMARCA1-205ENST00000617310 VSIG1Q86XK7 387 aa10.84□□□□□ -0.67
SMARCA1-205ENST00000617310 ADSSL1Q8N142 457 aa10.84□□□□□ -0.67
SMARCA1-205ENST00000617310 GMCL1Q96IK5 515 aa10.84□□□□□ -0.67
SMARCA1-205ENST00000617310 TUBE1Q9UJT0 475 aa10.84□□□□□ -0.67
SMARCA1-205ENST00000617310 VWA5AO00534 786 aa10.84□□□□□ -0.67
SMARCA1-205ENST00000617310 NPTXRO95502 500 aa10.84□□□□□ -0.67
SMARCA1-205ENST00000617310 ECEL1O95672 775 aa10.84□□□□□ -0.67
SMARCA1-205ENST00000617310 TMEM132DQ14C87 1099 aa10.84□□□□□ -0.67
SMARCA1-205ENST00000617310 HP1BP3Q5SSJ5 553 aaPredicted RBP10.84□□□□□ -0.67
SMARCA1-205ENST00000617310 VPS52Q8N1B4 723 aa10.84□□□□□ -0.67
SMARCA1-205ENST00000617310 PRPF31Q8WWY3 499 aaKnown RBP10.84□□□□□ -0.67
SMARCA1-205ENST00000617310 IDI2Q9BXS1 227 aa10.84□□□□□ -0.67
SMARCA1-205ENST00000617310 IRX2Q9BZI1 471 aaPredicted RBP10.84□□□□□ -0.67
SMARCA1-205ENST00000617310 KIAA1683Q9H0B3 1180 aa10.84□□□□□ -0.67
SMARCA1-205ENST00000617310 DHX35Q9H5Z1 703 aaKnown RBP10.84□□□□□ -0.67
SMARCA1-205ENST00000617310 UBN1Q9NPG3 1134 aa10.84□□□□□ -0.67
SMARCA1-205ENST00000617310 SETD4Q9NVD3 440 aa10.84□□□□□ -0.67
SMARCA1-205ENST00000617310 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.84□□□□□ -0.672e-7■■■□□ 18.3
SMARCA1-205ENST00000617310 ANAPC5Q9UJX4 755 aa10.84□□□□□ -0.67
SMARCA1-205ENST00000617310 B3GAT3O94766 335 aa10.83□□□□□ -0.68
SMARCA1-205ENST00000617310 SEC31AO94979 1220 aaKnown RBP10.83□□□□□ -0.68
SMARCA1-205ENST00000617310 PTPRAP18433 802 aa10.83□□□□□ -0.68
SMARCA1-205ENST00000617310 OAS2P29728 719 aaKnown RBP10.83□□□□□ -0.68
SMARCA1-205ENST00000617310 ZNF131P52739 623 aa10.83□□□□□ -0.68
SMARCA1-205ENST00000617310 RWDD2BP57060 319 aa10.83□□□□□ -0.68
SMARCA1-205ENST00000617310 DLK2Q6UY11 383 aa10.83□□□□□ -0.68
SMARCA1-205ENST00000617310 RAPH1Q70E73 1250 aa10.83□□□□□ -0.68
SMARCA1-205ENST00000617310 HASPINQ8TF76 798 aa10.83□□□□□ -0.68
SMARCA1-205ENST00000617310 OSMRQ99650 979 aa10.83□□□□□ -0.68
SMARCA1-205ENST00000617310 CHP1Q99653 195 aa10.83□□□□□ -0.68
SMARCA1-205ENST00000617310 PLCB1Q9NQ66 1216 aa10.83□□□□□ -0.68
SMARCA1-205ENST00000617310 RNF19AQ9NV58 838 aa10.83□□□□□ -0.68
SMARCA1-205ENST00000617310 ATP11BQ9Y2G3 1177 aa10.83□□□□□ -0.68
SMARCA1-205ENST00000617310 H3BRB1 525 aa10.83□□□□□ -0.68
SMARCA1-205ENST00000617310 GOLGA8MH3BSY2 632 aa10.83□□□□□ -0.68
SMARCA1-205ENST00000617310 VIL1P09327 827 aaKnown RBP10.83□□□□□ -0.68
SMARCA1-205ENST00000617310 FGFR4P22455 802 aa10.83□□□□□ -0.68
SMARCA1-205ENST00000617310 ADORA2AP29274 412 aa10.83□□□□□ -0.68
SMARCA1-205ENST00000617310 IRX4P78413 519 aa10.83□□□□□ -0.68
SMARCA1-205ENST00000617310 DPYDQ12882 1025 aa10.83□□□□□ -0.68
SMARCA1-205ENST00000617310 GJC2Q5T442 439 aaPredicted RBP10.83□□□□□ -0.68
SMARCA1-205ENST00000617310 SRGAP1Q7Z6B7 1085 aa10.83□□□□□ -0.68
SMARCA1-205ENST00000617310 MROH8Q9H579 483 aa10.83□□□□□ -0.68
SMARCA1-205ENST00000617310 TUT1Q9H6E5 874 aaKnown RBP10.83□□□□□ -0.68
SMARCA1-205ENST00000617310 IFT122Q9HBG6 1241 aa10.83□□□□□ -0.68
SMARCA1-205ENST00000617310 AGPAT5Q9NUQ2 364 aa10.83□□□□□ -0.68
SMARCA1-205ENST00000617310 CALCOCO1Q9P1Z2 691 aa10.83□□□□□ -0.68
SMARCA1-205ENST00000617310 JRKLQ9Y4A0 524 aa10.83□□□□□ -0.68
SMARCA1-205ENST00000617310 NWD1Q149M9 1564 aa10.83□□□□□ -0.68
SMARCA1-205ENST00000617310 PI4K2BG5E9Z4 385 aa10.83□□□□□ -0.68
SMARCA1-205ENST00000617310 MAFGO15525 162 aa10.83□□□□□ -0.68
SMARCA1-205ENST00000617310 CYTH3O43739 400 aa10.83□□□□□ -0.68
SMARCA1-205ENST00000617310 PQBP1O60828 265 aaKnown RBP10.83□□□□□ -0.68
SMARCA1-205ENST00000617310 INHBAP08476 426 aa10.83□□□□□ -0.68
SMARCA1-205ENST00000617310 ITGA4P13612 1032 aa10.83□□□□□ -0.68
SMARCA1-205ENST00000617310 TOB1P50616 345 aaPredicted RBP10.83□□□□□ -0.68
SMARCA1-205ENST00000617310 NTRK3Q16288 839 aa10.83□□□□□ -0.68
SMARCA1-205ENST00000617310 ACCSLQ4AC99 568 aa10.83□□□□□ -0.68
SMARCA1-205ENST00000617310 SDCCAG8Q86SQ7 713 aaPredicted RBP10.83□□□□□ -0.68
SMARCA1-205ENST00000617310 GPRASP2Q96D09 838 aa10.83□□□□□ -0.68
SMARCA1-205ENST00000617310 ZNF560Q96MR9 790 aa10.83□□□□□ -0.68
SMARCA1-205ENST00000617310 PANX2Q96RD6 677 aa10.83□□□□□ -0.68
SMARCA1-205ENST00000617310 NUP85Q9BW27 656 aa10.83□□□□□ -0.68
SMARCA1-205ENST00000617310 TRPC7Q9HCX4 862 aa10.83□□□□□ -0.68
SMARCA1-205ENST00000617310 LMCD1Q9NZU5 365 aa10.83□□□□□ -0.68
SMARCA1-205ENST00000617310 KLHL8Q9P2G9 620 aaPredicted RBP10.83□□□□□ -0.68
SMARCA1-205ENST00000617310 PEX10O60683 326 aa10.82□□□□□ -0.68
SMARCA1-205ENST00000617310 CPP00450 1065 aa10.82□□□□□ -0.68
SMARCA1-205ENST00000617310 CYP11B2P19099 503 aa10.82□□□□□ -0.68
SMARCA1-205ENST00000617310 DSG3P32926 999 aa10.82□□□□□ -0.68
SMARCA1-205ENST00000617310 GRIK1P39086 918 aa10.82□□□□□ -0.68
SMARCA1-205ENST00000617310 GPC5P78333 572 aa10.82□□□□□ -0.68
SMARCA1-205ENST00000617310 MTMR3Q13615 1198 aa10.82□□□□□ -0.68
SMARCA1-205ENST00000617310 PRPSAP1Q14558 356 aa10.82□□□□□ -0.68
SMARCA1-205ENST00000617310 KCNB1Q14721 858 aa10.82□□□□□ -0.68
SMARCA1-205ENST00000617310 PPP2R5EQ16537 467 aa10.82□□□□□ -0.68
SMARCA1-205ENST00000617310 MUM1L1Q5H9M0 696 aa10.82□□□□□ -0.68
SMARCA1-205ENST00000617310 PRAMEF19Q5SWL8 479 aa10.82□□□□□ -0.68
SMARCA1-205ENST00000617310 SYCP2LQ5T4T6 812 aa10.82□□□□□ -0.68
SMARCA1-205ENST00000617310 MAP3K14Q99558 947 aa10.82□□□□□ -0.68
SMARCA1-205ENST00000617310 SEPT5Q99719 369 aaPredicted RBP10.82□□□□□ -0.68
SMARCA1-205ENST00000617310 A1CFQ9NQ94 594 aaKnown RBP10.82□□□□□ -0.68
SMARCA1-205ENST00000617310 CYP26B1Q9NR63 512 aa10.82□□□□□ -0.68
SMARCA1-205ENST00000617310 FAM8A1Q9UBU6 413 aa10.82□□□□□ -0.68
SMARCA1-205ENST00000617310 SNX24Q9Y343 169 aa10.82□□□□□ -0.68
SMARCA1-205ENST00000617310 SCINQ9Y6U3 715 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms