RNA–Protein interactions for RNA: ENST00000612277.4

HLCS-207, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HLCS, Length 6,112 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-207ENST00000612277 CD248Q9HCU0 757 aa13.09□□□□□ -0.31
HLCS-207ENST00000612277 TAF4O00268 1085 aa13.09□□□□□ -0.31
HLCS-207ENST00000612277 ZNF197O14709 1029 aa13.09□□□□□ -0.31
HLCS-207ENST00000612277 KRT76Q01546 638 aa13.09□□□□□ -0.31
HLCS-207ENST00000612277 ATP1A4Q13733 1029 aa13.09□□□□□ -0.31
HLCS-207ENST00000612277 RIN3Q8TB24 985 aa13.09□□□□□ -0.31
HLCS-207ENST00000612277 LRRC59Q96AG4 307 aaKnown RBP13.09□□□□□ -0.31
HLCS-207ENST00000612277 LBHD1Q9BQE6 289 aaPredicted RBP13.09□□□□□ -0.31
HLCS-207ENST00000612277 NOL6Q9H6R4 1146 aaKnown RBP13.09□□□□□ -0.31
HLCS-207ENST00000612277 CDYLQ9Y232 598 aa13.09□□□□□ -0.31
HLCS-207ENST00000612277 RTCBQ9Y3I0 505 aaKnown RBP13.09□□□□□ -0.31
HLCS-207ENST00000612277 PDE8AO60658 829 aa13.09□□□□□ -0.31
HLCS-207ENST00000612277 GGPS1O95749 300 aa13.09□□□□□ -0.31
HLCS-207ENST00000612277 ALAS1P13196 640 aa13.09□□□□□ -0.31
HLCS-207ENST00000612277 HMOX2P30519 316 aa13.09□□□□□ -0.31
HLCS-207ENST00000612277 ATXN3P54252 364 aaPredicted RBP13.09□□□□□ -0.31
HLCS-207ENST00000612277 PKP1Q13835 747 aa13.09□□□□□ -0.31
HLCS-207ENST00000612277 NAALADL2Q58DX5 795 aa13.09□□□□□ -0.31
HLCS-207ENST00000612277 ARMC4Q5T2S8 1044 aa13.09□□□□□ -0.31
HLCS-207ENST00000612277 CNDP1Q96KN2 507 aa13.09□□□□□ -0.31
HLCS-207ENST00000612277 AS3MTQ9HBK9 375 aa13.09□□□□□ -0.31
HLCS-207ENST00000612277 GJA3Q9Y6H8 435 aa13.09□□□□□ -0.31
HLCS-207ENST00000612277 PTPN23Q9H3S7 1636 aa13.09□□□□□ -0.31
HLCS-207ENST00000612277 MAP3K15Q6ZN16 1313 aa13.09□□□□□ -0.31
HLCS-207ENST00000612277 ABCC5O15440 1437 aa13.09□□□□□ -0.31
HLCS-207ENST00000612277 NEMP1O14524 444 aa13.09□□□□□ -0.31
HLCS-207ENST00000612277 MTHFSDQ2M296 383 aaKnown RBP13.09□□□□□ -0.31
HLCS-207ENST00000612277 AKIRIN2Q53H80 203 aa13.09□□□□□ -0.31
HLCS-207ENST00000612277 KLHL17Q6TDP4 642 aa13.09□□□□□ -0.31
HLCS-207ENST00000612277 C16orf62Q7Z3J2 963 aa13.09□□□□□ -0.31
HLCS-207ENST00000612277 FAM153AQ9UHL3 310 aa13.09□□□□□ -0.31
HLCS-207ENST00000612277 SERPINB13Q9UIV8 391 aa13.09□□□□□ -0.31
HLCS-207ENST00000612277 MOSPD1Q9UJG1 213 aa13.09□□□□□ -0.31
HLCS-207ENST00000612277 PCDHA4Q9UN74 947 aa13.09□□□□□ -0.31
HLCS-207ENST00000612277 SAC3D1A6NKF1 404 aa13.09□□□□□ -0.31
HLCS-207ENST00000612277 AP3B1O00203 1094 aa13.09□□□□□ -0.31
HLCS-207ENST00000612277 RGS20O76081 388 aa13.09□□□□□ -0.31
HLCS-207ENST00000612277 ROR1Q01973 937 aa13.09□□□□□ -0.31
HLCS-207ENST00000612277 SH3KBP1Q96B97 665 aa13.09□□□□□ -0.31
HLCS-207ENST00000612277 CENPTQ96BT3 561 aa13.09□□□□□ -0.31
HLCS-207ENST00000612277 METTL22Q9BUU2 404 aaPredicted RBP13.09□□□□□ -0.31
HLCS-207ENST00000612277 ALG13Q9NP73 1137 aaKnown RBP13.09□□□□□ -0.31
HLCS-207ENST00000612277 MROH5Q6ZUA9 1318 aa13.08□□□□□ -0.31
HLCS-207ENST00000612277 SNAPC4Q5SXM2 1469 aa13.08□□□□□ -0.32
HLCS-207ENST00000612277 IGF2BP3O00425 579 aaKnown RBP eCLIP13.08□□□□□ -0.32
HLCS-207ENST00000612277 BNIP3LO60238 219 aa13.08□□□□□ -0.32
HLCS-207ENST00000612277 FOSP01100 380 aaPredicted RBP13.08□□□□□ -0.32
HLCS-207ENST00000612277 GPC5P78333 572 aa13.08□□□□□ -0.32
HLCS-207ENST00000612277 GANCQ8TET4 914 aa13.08□□□□□ -0.32
HLCS-207ENST00000612277 CEP72Q9P209 647 aa13.08□□□□□ -0.32
HLCS-207ENST00000612277 AFF4Q9UHB7 1163 aaKnown RBP13.08□□□□□ -0.32
HLCS-207ENST00000612277 APPL1Q9UKG1 709 aa13.08□□□□□ -0.32
HLCS-207ENST00000612277 MFN2O95140 757 aa13.08□□□□□ -0.32
HLCS-207ENST00000612277 SERPINH1P50454 418 aaKnown RBP13.08□□□□□ -0.32
HLCS-207ENST00000612277 PPP4R3CPQ6ZMV5 832 aa13.08□□□□□ -0.32
HLCS-207ENST00000612277 RHPN2Q8IUC4 686 aa13.08□□□□□ -0.32
HLCS-207ENST00000612277 PLBD2Q8NHP8 589 aa13.08□□□□□ -0.32
HLCS-207ENST00000612277 HDHD2Q9H0R4 259 aa13.08□□□□□ -0.32
HLCS-207ENST00000612277 ATAD3AQ9NVI7 634 aa13.08□□□□□ -0.32
HLCS-207ENST00000612277 ZFATQ9P243 1243 aa13.08□□□□□ -0.32
HLCS-207ENST00000612277 PIPSLA2A3N6 862 aa13.08□□□□□ -0.32
HLCS-207ENST00000612277 CENPXA8MT69 81 aa13.08□□□□□ -0.32
HLCS-207ENST00000612277 PDE9AO76083 593 aa13.08□□□□□ -0.32
HLCS-207ENST00000612277 MYBL1P10243 752 aa13.08□□□□□ -0.32
HLCS-207ENST00000612277 DHX34Q14147 1143 aaKnown RBP13.08□□□□□ -0.32
HLCS-207ENST00000612277 ERP27Q96DN0 273 aa13.08□□□□□ -0.32
HLCS-207ENST00000612277 FAM210AQ96ND0 272 aa13.08□□□□□ -0.32
HLCS-207ENST00000612277 ETAA1Q9NY74 926 aa13.08□□□□□ -0.32
HLCS-207ENST00000612277 CNOT8Q9UFF9 292 aaKnown RBP13.08□□□□□ -0.32
HLCS-207ENST00000612277 KLRF2D3W0D1 207 aa13.08□□□□□ -0.32
HLCS-207ENST00000612277 TALDO1P37837 337 aa13.08□□□□□ -0.32
HLCS-207ENST00000612277 LRRC63Q05C16 580 aa13.08□□□□□ -0.32
HLCS-207ENST00000612277 SCRN1Q12765 414 aa13.08□□□□□ -0.32
HLCS-207ENST00000612277 BYSLQ13895 437 aaKnown RBP13.08□□□□□ -0.32
HLCS-207ENST00000612277 ANO4Q32M45 955 aa13.08□□□□□ -0.32
HLCS-207ENST00000612277 GRAMD1CQ8IYS0 662 aa13.08□□□□□ -0.32
HLCS-207ENST00000612277 ZNF483Q8TF39 744 aaPredicted RBP13.08□□□□□ -0.32
HLCS-207ENST00000612277 EMILIN3Q9NT22 766 aa13.08□□□□□ -0.32
HLCS-207ENST00000612277 ABHD10Q9NUJ1 306 aa13.08□□□□□ -0.32
HLCS-207ENST00000612277 CACNA2D2Q9NY47 1150 aa13.08□□□□□ -0.32
HLCS-207ENST00000612277 AKT3Q9Y243 479 aa13.08□□□□□ -0.32
HLCS-207ENST00000612277 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.08□□□□□ -0.32
HLCS-207ENST00000612277 AIM2O14862 343 aa13.07□□□□□ -0.32
HLCS-207ENST00000612277 SEMA3EO15041 775 aa13.07□□□□□ -0.32
HLCS-207ENST00000612277 CDC40O60508 579 aaKnown RBP eCLIP13.07□□□□□ -0.32
HLCS-207ENST00000612277 ADD1P35611 737 aaKnown RBP13.07□□□□□ -0.32
HLCS-207ENST00000612277 ITPRIPL1Q6GPH6 555 aa13.07□□□□□ -0.32
HLCS-207ENST00000612277 CDKL3Q8IVW4 592 aaPredicted RBP13.07□□□□□ -0.32
HLCS-207ENST00000612277 ACAP3Q96P50 834 aa13.07□□□□□ -0.32
HLCS-207ENST00000612277 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.07□□□□□ -0.32
HLCS-207ENST00000612277 NDFIP2Q9NV92 336 aa13.07□□□□□ -0.32
HLCS-207ENST00000612277 ADAMTS1Q9UHI8 967 aa13.07□□□□□ -0.32
HLCS-207ENST00000612277 TOPBP1Q92547 1522 aa13.07□□□□□ -0.32
HLCS-207ENST00000612277 FAM25AB3EWG3 89 aa13.07□□□□□ -0.32
HLCS-207ENST00000612277 FAM25CB3EWG5 89 aa13.07□□□□□ -0.32
HLCS-207ENST00000612277 FAM25GB3EWG6 89 aa13.07□□□□□ -0.32
HLCS-207ENST00000612277 PSTPIP1O43586 416 aa13.07□□□□□ -0.32
HLCS-207ENST00000612277 PSMC3P17980 439 aa13.07□□□□□ -0.32
HLCS-207ENST00000612277 CENPAP49450 140 aa13.07□□□□□ -0.32
HLCS-207ENST00000612277 TCP10Q12799 353 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms