RNA–Protein interactions for RNA: ENST00000608254.1

PTCHD1-AS-202, Transcript of PTCHD1 antisense RNA (head to head), humanhuman

TSL 4 BASIC

Gene PTCHD1-AS, Length 557 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-AS-202ENST00000608254 PIGRP01833 764 aa13.16□□□□□ -0.3
PTCHD1-AS-202ENST00000608254 EDN1P05305 212 aa13.16□□□□□ -0.3
PTCHD1-AS-202ENST00000608254 STAG3L1P0CL83 205 aa13.16□□□□□ -0.3
PTCHD1-AS-202ENST00000608254 ATP2A2P16615 1042 aaKnown RBP13.16□□□□□ -0.3
PTCHD1-AS-202ENST00000608254 CASP5P51878 434 aa13.16□□□□□ -0.3
PTCHD1-AS-202ENST00000608254 DEFB103AP81534 67 aa13.16□□□□□ -0.3
PTCHD1-AS-202ENST00000608254 STK4Q13043 487 aa13.16□□□□□ -0.3
PTCHD1-AS-202ENST00000608254 UBXN11Q5T124 520 aa13.16□□□□□ -0.3
PTCHD1-AS-202ENST00000608254 NPAS4Q8IUM7 802 aa13.16□□□□□ -0.3
PTCHD1-AS-202ENST00000608254 MYOCDQ8IZQ8 938 aa13.16□□□□□ -0.3
PTCHD1-AS-202ENST00000608254 CRIPAKQ8N1N5 446 aa13.16□□□□□ -0.3
PTCHD1-AS-202ENST00000608254 ZNF507Q8TCN5 953 aa13.16□□□□□ -0.3
PTCHD1-AS-202ENST00000608254 TOP1MTQ969P6 601 aa13.16□□□□□ -0.3
PTCHD1-AS-202ENST00000608254 BICD1Q96G01 975 aa13.16□□□□□ -0.3
PTCHD1-AS-202ENST00000608254 ADPGKQ9BRR6 497 aa13.16□□□□□ -0.3
PTCHD1-AS-202ENST00000608254 FGFBP2Q9BYJ0 223 aa13.16□□□□□ -0.3
PTCHD1-AS-202ENST00000608254 CLSTN2Q9H4D0 955 aa13.16□□□□□ -0.3
PTCHD1-AS-202ENST00000608254 PDZD7Q9H5P4 517 aa13.16□□□□□ -0.3
PTCHD1-AS-202ENST00000608254 TMEM206Q9H813 350 aa13.16□□□□□ -0.3
PTCHD1-AS-202ENST00000608254 PTPRHQ9HD43 1115 aa13.16□□□□□ -0.3
PTCHD1-AS-202ENST00000608254 SLC39A2Q9NP94 309 aa13.16□□□□□ -0.3
PTCHD1-AS-202ENST00000608254 FAM105AQ9NUU6 356 aa13.16□□□□□ -0.3
PTCHD1-AS-202ENST00000608254 TMEM161AQ9NX61 479 aa13.16□□□□□ -0.3
PTCHD1-AS-202ENST00000608254 COLQQ9Y215 455 aaPredicted RBP13.16□□□□□ -0.3
PTCHD1-AS-202ENST00000608254 USP20Q9Y2K6 914 aa13.16□□□□□ -0.3
PTCHD1-AS-202ENST00000608254 PCDHB7Q9Y5E2 793 aa13.16□□□□□ -0.3
PTCHD1-AS-202ENST00000608254 UBE4BO95155 1302 aa13.15□□□□□ -0.3
PTCHD1-AS-202ENST00000608254 EVPLQ92817 2033 aa13.15□□□□□ -0.3
PTCHD1-AS-202ENST00000608254 HNRNPDLO14979 420 aaKnown RBP13.15□□□□□ -0.3
PTCHD1-AS-202ENST00000608254 PRPF6O94906 941 aaKnown RBP13.15□□□□□ -0.3
PTCHD1-AS-202ENST00000608254 KIF20AO95235 890 aa13.15□□□□□ -0.3
PTCHD1-AS-202ENST00000608254 PROZP22891 400 aa13.15□□□□□ -0.3
PTCHD1-AS-202ENST00000608254 LIG4P49917 911 aa13.15□□□□□ -0.3
PTCHD1-AS-202ENST00000608254 CAMK4Q16566 473 aa13.15□□□□□ -0.3
PTCHD1-AS-202ENST00000608254 BMT2Q1RMZ1 405 aa13.15□□□□□ -0.3
PTCHD1-AS-202ENST00000608254 DCAF4L1Q3SXM0 396 aa13.15□□□□□ -0.3
PTCHD1-AS-202ENST00000608254 EEF1DP3Q658K8 133 aa13.15□□□□□ -0.3
PTCHD1-AS-202ENST00000608254 MRPL10Q7Z7H8 261 aaKnown RBP13.15□□□□□ -0.3
PTCHD1-AS-202ENST00000608254 ECHDC2Q86YB7 292 aa13.15□□□□□ -0.3
PTCHD1-AS-202ENST00000608254 HERC6Q8IVU3 1022 aa13.15□□□□□ -0.3
PTCHD1-AS-202ENST00000608254 GLIS3Q8NEA6 775 aa13.15□□□□□ -0.3
PTCHD1-AS-202ENST00000608254 PGBD4Q96DM1 585 aa13.15□□□□□ -0.3
PTCHD1-AS-202ENST00000608254 TCHPQ9BT92 498 aa13.15□□□□□ -0.3
PTCHD1-AS-202ENST00000608254 EIF2AQ9BY44 585 aaKnown RBP13.15□□□□□ -0.3
PTCHD1-AS-202ENST00000608254 TRIM6Q9C030 488 aaPredicted RBP13.15□□□□□ -0.3
PTCHD1-AS-202ENST00000608254 NUP62CLQ9H1M0 184 aa13.15□□□□□ -0.3
PTCHD1-AS-202ENST00000608254 LRFN2Q9ULH4 789 aa13.15□□□□□ -0.3
PTCHD1-AS-202ENST00000608254 PCDHB2Q9Y5E7 798 aa13.15□□□□□ -0.3
PTCHD1-AS-202ENST00000608254 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.14□□□□□ -0.31
PTCHD1-AS-202ENST00000608254 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.14□□□□□ -0.31
PTCHD1-AS-202ENST00000608254 CLDN3O15551 220 aa13.14□□□□□ -0.31
PTCHD1-AS-202ENST00000608254 NPTXRO95502 500 aa13.14□□□□□ -0.31
PTCHD1-AS-202ENST00000608254 MCF2P10911 925 aa13.14□□□□□ -0.31
PTCHD1-AS-202ENST00000608254 MCL1Q07820 350 aa13.14□□□□□ -0.31
PTCHD1-AS-202ENST00000608254 KCNA1Q09470 495 aa13.14□□□□□ -0.31
PTCHD1-AS-202ENST00000608254 SLFN12LQ6IEE8 588 aa13.14□□□□□ -0.31
PTCHD1-AS-202ENST00000608254 MPZL3Q6UWV2 235 aa13.14□□□□□ -0.31
PTCHD1-AS-202ENST00000608254 ZNF598Q86UK7 904 aaKnown RBP13.14□□□□□ -0.31
PTCHD1-AS-202ENST00000608254 CDR2LQ86X02 465 aaPredicted RBP13.14□□□□□ -0.31
PTCHD1-AS-202ENST00000608254 HACE1Q8IYU2 909 aa13.14□□□□□ -0.31
PTCHD1-AS-202ENST00000608254 SYCP3Q8IZU3 236 aa13.14□□□□□ -0.31
PTCHD1-AS-202ENST00000608254 KIAA0895Q8NCT3 520 aa13.14□□□□□ -0.31
PTCHD1-AS-202ENST00000608254 SCFD1Q8WVM8 642 aa13.14□□□□□ -0.31
PTCHD1-AS-202ENST00000608254 ERCC4Q92889 916 aaPredicted RBP13.14□□□□□ -0.31
PTCHD1-AS-202ENST00000608254 KIAA1468Q9P260 1216 aa13.14□□□□□ -0.31
PTCHD1-AS-202ENST00000608254 SIP14410 1827 aa13.13□□□□□ -0.31
PTCHD1-AS-202ENST00000608254 ABLIM1O14639 778 aa13.13□□□□□ -0.31
PTCHD1-AS-202ENST00000608254 HOXA2O43364 376 aa13.13□□□□□ -0.31
PTCHD1-AS-202ENST00000608254 UPP2O95045 317 aa13.13□□□□□ -0.31
PTCHD1-AS-202ENST00000608254 GJB5O95377 273 aa13.13□□□□□ -0.31
PTCHD1-AS-202ENST00000608254 HOXD13P35453 343 aa13.13□□□□□ -0.31
PTCHD1-AS-202ENST00000608254 SNRPFP62306 86 aaKnown RBP13.13□□□□□ -0.31
PTCHD1-AS-202ENST00000608254 LRIT3Q3SXY7 679 aa13.13□□□□□ -0.31
PTCHD1-AS-202ENST00000608254 ZNF568Q3ZCX4 644 aa13.13□□□□□ -0.31
PTCHD1-AS-202ENST00000608254 COBLL1Q53SF7 1204 aa13.13□□□□□ -0.31
PTCHD1-AS-202ENST00000608254 ZNF658Q5TYW1 1059 aaPredicted RBP13.13□□□□□ -0.31
PTCHD1-AS-202ENST00000608254 SMG8Q8ND04 991 aaKnown RBP13.13□□□□□ -0.31
PTCHD1-AS-202ENST00000608254 RSPH1Q8WYR4 309 aa13.13□□□□□ -0.31
PTCHD1-AS-202ENST00000608254 ZBTB45Q96K62 511 aaPredicted RBP13.13□□□□□ -0.31
PTCHD1-AS-202ENST00000608254 ZBED2Q9BTP6 218 aa13.13□□□□□ -0.31
PTCHD1-AS-202ENST00000608254 CDT1Q9H211 546 aa13.13□□□□□ -0.31
PTCHD1-AS-202ENST00000608254 UBN1Q9NPG3 1134 aa13.13□□□□□ -0.31
PTCHD1-AS-202ENST00000608254 MAN1B1Q9UKM7 699 aa13.13□□□□□ -0.31
PTCHD1-AS-202ENST00000608254 IPPQ9Y573 584 aa13.13□□□□□ -0.31
PTCHD1-AS-202ENST00000608254 STYXL1Q9Y6J8 313 aa13.13□□□□□ -0.31
PTCHD1-AS-202ENST00000608254 SCN5AQ14524 2016 aa13.13□□□□□ -0.31
PTCHD1-AS-202ENST00000608254 A0A0B4J269 797 aa13.12□□□□□ -0.31
PTCHD1-AS-202ENST00000608254 ANKRD63C9JTQ0 380 aa13.12□□□□□ -0.31
PTCHD1-AS-202ENST00000608254 DGKIO75912 1065 aa13.12□□□□□ -0.31
PTCHD1-AS-202ENST00000608254 ITGA4P13612 1032 aa13.12□□□□□ -0.31
PTCHD1-AS-202ENST00000608254 ATF7P17544 494 aaPredicted RBP13.12□□□□□ -0.31
PTCHD1-AS-202ENST00000608254 IBSPP21815 317 aaPredicted RBP13.12□□□□□ -0.31
PTCHD1-AS-202ENST00000608254 MATR3P43243 847 aaKnown RBP eCLIP13.12□□□□□ -0.31
PTCHD1-AS-202ENST00000608254 HTRA4P83105 476 aaPredicted RBP13.12□□□□□ -0.31
PTCHD1-AS-202ENST00000608254 MORC3Q14149 939 aa13.12□□□□□ -0.31
PTCHD1-AS-202ENST00000608254 NOLC1Q14978 699 aaKnown RBP eCLIP13.12□□□□□ -0.31
PTCHD1-AS-202ENST00000608254 KYAT1Q16773 422 aa13.12□□□□□ -0.31
PTCHD1-AS-202ENST00000608254 KNOP1Q1ED39 458 aaKnown RBP13.12□□□□□ -0.31
PTCHD1-AS-202ENST00000608254 FAM117BQ6P1L5 589 aa13.12□□□□□ -0.31
PTCHD1-AS-202ENST00000608254 SLC39A4Q6P5W5 647 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms