RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 TMCO2Q7Z6W1 182 aaPredicted RBP15.25■□□□□ 0.03
RNF40-212ENST00000602784 ELOA2Q8IYF1 753 aaPredicted RBP15.25■□□□□ 0.03
RNF40-212ENST00000602784 SP7Q8TDD2 431 aaPredicted RBP15.25■□□□□ 0.03
RNF40-212ENST00000602784 ZNF689Q96CS4 500 aaPredicted RBP15.25■□□□□ 0.03
RNF40-212ENST00000602784 PGBD4Q96DM1 585 aa15.25■□□□□ 0.03
RNF40-212ENST00000602784 GBP4Q96PP9 640 aa15.25■□□□□ 0.03
RNF40-212ENST00000602784 YME1L1Q96TA2 773 aa15.25■□□□□ 0.03
RNF40-212ENST00000602784 ACO2Q99798 780 aaKnown RBP15.25■□□□□ 0.03
RNF40-212ENST00000602784 PDZD7Q9H5P4 517 aa15.25■□□□□ 0.03
RNF40-212ENST00000602784 MRPL44Q9H9J2 332 aaKnown RBP15.25■□□□□ 0.03
RNF40-212ENST00000602784 RC3H2Q9HBD1 1191 aaKnown RBP15.25■□□□□ 0.03
RNF40-212ENST00000602784 PCDHB13Q9Y5F0 798 aa15.25■□□□□ 0.03
RNF40-212ENST00000602784 COL4A6Q14031 1691 aa15.25■□□□□ 0.03
RNF40-212ENST00000602784 TMEM265A0A087WTH1 108 aa15.24■□□□□ 0.03
RNF40-212ENST00000602784 SOX1O00570 391 aaPredicted RBP15.24■□□□□ 0.03
RNF40-212ENST00000602784 PIGRP01833 764 aa15.24■□□□□ 0.03
RNF40-212ENST00000602784 EDN1P05305 212 aa15.24■□□□□ 0.03
RNF40-212ENST00000602784 ATF7P17544 494 aaPredicted RBP15.24■□□□□ 0.03
RNF40-212ENST00000602784 LIG1P18858 919 aa15.24■□□□□ 0.03
RNF40-212ENST00000602784 NMT1P30419 496 aaKnown RBP15.24■□□□□ 0.03
RNF40-212ENST00000602784 PBX2P40425 430 aa15.24■□□□□ 0.03
RNF40-212ENST00000602784 EHHADHQ08426 723 aa15.24■□□□□ 0.03
RNF40-212ENST00000602784 GRAMD1CQ8IYS0 662 aa15.24■□□□□ 0.03
RNF40-212ENST00000602784 HACE1Q8IYU2 909 aa15.24■□□□□ 0.03
RNF40-212ENST00000602784 TIFAQ96CG3 184 aa15.24■□□□□ 0.03
RNF40-212ENST00000602784 ADPGKQ9BRR6 497 aa15.24■□□□□ 0.03
RNF40-212ENST00000602784 TARS2Q9BW92 718 aaKnown RBP15.24■□□□□ 0.03
RNF40-212ENST00000602784 BLZF1Q9H2G9 400 aa15.24■□□□□ 0.03
RNF40-212ENST00000602784 PTPRHQ9HD43 1115 aa15.24■□□□□ 0.03
RNF40-212ENST00000602784 UBN1Q9NPG3 1134 aa15.24■□□□□ 0.03
RNF40-212ENST00000602784 YBX2Q9Y2T7 364 aaKnown RBP15.24■□□□□ 0.03
RNF40-212ENST00000602784 PRPF40AO75400 957 aaKnown RBP15.23■□□□□ 0.03
RNF40-212ENST00000602784 NR1I2O75469 434 aa15.23■□□□□ 0.03
RNF40-212ENST00000602784 TOM1L1O75674 476 aa15.23■□□□□ 0.03
RNF40-212ENST00000602784 PROZP22891 400 aa15.23■□□□□ 0.03
RNF40-212ENST00000602784 FXR1P51114 621 aaKnown RBP eCLIP15.23■□□□□ 0.03
RNF40-212ENST00000602784 TMEM132AQ24JP5 1023 aa15.23■□□□□ 0.03
RNF40-212ENST00000602784 DCAF4L1Q3SXM0 396 aa15.23■□□□□ 0.03
RNF40-212ENST00000602784 STXBP4Q6ZWJ1 553 aa15.23■□□□□ 0.03
RNF40-212ENST00000602784 MAP4K3Q8IVH8 894 aa15.23■□□□□ 0.03
RNF40-212ENST00000602784 CMTR2Q8IYT2 770 aaKnown RBP15.23■□□□□ 0.03
RNF40-212ENST00000602784 SMG8Q8ND04 991 aaKnown RBP15.23■□□□□ 0.03
RNF40-212ENST00000602784 EIF2AQ9BY44 585 aaKnown RBP15.23■□□□□ 0.03
RNF40-212ENST00000602784 TRIM6Q9C030 488 aaPredicted RBP15.23■□□□□ 0.03
RNF40-212ENST00000602784 TMEM117Q9H0C3 514 aa15.23■□□□□ 0.03
RNF40-212ENST00000602784 SLC28A3Q9HAS3 691 aa15.23■□□□□ 0.03
RNF40-212ENST00000602784 HOOK1Q9UJC3 728 aaKnown RBP15.23■□□□□ 0.03
RNF40-212ENST00000602784 IPPQ9Y573 584 aa15.23■□□□□ 0.03
RNF40-212ENST00000602784 KLRC4O43908 158 aa15.22■□□□□ 0.03
RNF40-212ENST00000602784 KINO60870 393 aaKnown RBP15.22■□□□□ 0.03
RNF40-212ENST00000602784 CA3P07451 260 aa15.22■□□□□ 0.03
RNF40-212ENST00000602784 MYOGP15173 224 aa15.22■□□□□ 0.03
RNF40-212ENST00000602784 CASP1P29466 404 aa15.22■□□□□ 0.03
RNF40-212ENST00000602784 DPYDQ12882 1025 aa15.22■□□□□ 0.03
RNF40-212ENST00000602784 PSMD2Q13200 908 aa15.22■□□□□ 0.03
RNF40-212ENST00000602784 ZC2HC1CQ53FD0 456 aaPredicted RBP15.22■□□□□ 0.03
RNF40-212ENST00000602784 FAM26FQ5R3K3 315 aa15.22■□□□□ 0.03
RNF40-212ENST00000602784 EEF1DP3Q658K8 133 aa15.22■□□□□ 0.03
RNF40-212ENST00000602784 GLB1LQ6UWU2 654 aa15.22■□□□□ 0.03
RNF40-212ENST00000602784 LRCH3Q96II8 777 aa15.22■□□□□ 0.03
RNF40-212ENST00000602784 RNF19AQ9NV58 838 aa15.22■□□□□ 0.03
RNF40-212ENST00000602784 TBC1D7Q9P0N9 293 aa15.22■□□□□ 0.03
RNF40-212ENST00000602784 USP20Q9Y2K6 914 aa15.22■□□□□ 0.03
RNF40-212ENST00000602784 ZMYM2Q9UBW7 1377 aa15.22■□□□□ 0.03
RNF40-212ENST00000602784 GBF1Q92538 1859 aa15.21■□□□□ 0.03
RNF40-212ENST00000602784 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.21■□□□□ 0.03
RNF40-212ENST00000602784 ABLIM1O14639 778 aa15.21■□□□□ 0.03
RNF40-212ENST00000602784 INPPL1O15357 1258 aa15.21■□□□□ 0.03
RNF40-212ENST00000602784 EIF3DO15371 548 aaKnown RBP eCLIP15.21■□□□□ 0.03
RNF40-212ENST00000602784 GCNT3O95395 438 aa15.21■□□□□ 0.03
RNF40-212ENST00000602784 NPTXRO95502 500 aa15.21■□□□□ 0.03
RNF40-212ENST00000602784 MCF2P10911 925 aa15.21■□□□□ 0.03
RNF40-212ENST00000602784 FGFR1P11362 822 aa15.21■□□□□ 0.03
RNF40-212ENST00000602784 ITGA4P13612 1032 aa15.21■□□□□ 0.03
RNF40-212ENST00000602784 LIG4P49917 911 aa15.21■□□□□ 0.03
RNF40-212ENST00000602784 MCL1Q07820 350 aa15.21■□□□□ 0.03
RNF40-212ENST00000602784 BTG3Q14201 252 aaPredicted RBP15.21■□□□□ 0.03
RNF40-212ENST00000602784 POSTNQ15063 836 aa15.21■□□□□ 0.03
RNF40-212ENST00000602784 CLLU1OSQ5K130 101 aa15.21■□□□□ 0.03
RNF40-212ENST00000602784 L1TD1Q5T7N2 865 aaKnown RBP15.21■□□□□ 0.03
RNF40-212ENST00000602784 MPZL3Q6UWV2 235 aa15.21■□□□□ 0.03
RNF40-212ENST00000602784 AGMOQ6ZNB7 445 aa15.21■□□□□ 0.03
RNF40-212ENST00000602784 EPM2AIP1Q7L775 607 aaPredicted RBP15.21■□□□□ 0.03
RNF40-212ENST00000602784 CDR2LQ86X02 465 aaPredicted RBP15.21■□□□□ 0.03
RNF40-212ENST00000602784 ABI1Q8IZP0 508 aa15.21■□□□□ 0.03
RNF40-212ENST00000602784 RNF169Q8NCN4 708 aa15.21■□□□□ 0.03
RNF40-212ENST00000602784 CCDC47Q96A33 483 aaKnown RBP15.21■□□□□ 0.03
RNF40-212ENST00000602784 BICD1Q96G01 975 aa15.21■□□□□ 0.03
RNF40-212ENST00000602784 CASD1Q96PB1 797 aa15.21■□□□□ 0.03
RNF40-212ENST00000602784 ACCSQ96QU6 501 aa15.21■□□□□ 0.03
RNF40-212ENST00000602784 TCHPQ9BT92 498 aa15.21■□□□□ 0.03
RNF40-212ENST00000602784 NKX2-4Q9H2Z4 354 aa15.21■□□□□ 0.03
RNF40-212ENST00000602784 EXOC7Q9UPT5 735 aa15.21■□□□□ 0.03
RNF40-212ENST00000602784 GIT1Q9Y2X7 761 aa15.21■□□□□ 0.03
RNF40-212ENST00000602784 CHD9Q3L8U1 2897 aa15.21■□□□□ 0.02
RNF40-212ENST00000602784 LCHNA4D1U4 455 aa15.2■□□□□ 0.02
RNF40-212ENST00000602784 LINC01553A4QN01 128 aa15.2■□□□□ 0.02
RNF40-212ENST00000602784 GOLGA6L22H0YM25 854 aa15.2■□□□□ 0.02
RNF40-212ENST00000602784 HNRNPDLO14979 420 aaKnown RBP15.2■□□□□ 0.02
RNF40-212ENST00000602784 CLDN3O15551 220 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms