RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 FOSP01100 380 aaPredicted RBP11.75□□□□□ -0.53
SMG9-207ENST00000598860 IGHA1P01876 353 aa11.75□□□□□ -0.53
SMG9-207ENST00000598860 POLR2MP0CAP2 368 aa11.75□□□□□ -0.53
SMG9-207ENST00000598860 CCND3P30281 292 aaPredicted RBP11.75□□□□□ -0.53
SMG9-207ENST00000598860 CYP2C19P33261 490 aa11.75□□□□□ -0.53
SMG9-207ENST00000598860 NPY5RQ15761 445 aa11.75□□□□□ -0.53
SMG9-207ENST00000598860 SCARA3Q6AZY7 606 aa11.75□□□□□ -0.53
SMG9-207ENST00000598860 MCTP1Q6DN14 999 aa11.75□□□□□ -0.53
SMG9-207ENST00000598860 REC114Q7Z4M0 266 aa11.75□□□□□ -0.53
SMG9-207ENST00000598860 UBE2Q1Q7Z7E8 422 aa11.75□□□□□ -0.53
SMG9-207ENST00000598860 CPLX3Q8WVH0 158 aa11.75□□□□□ -0.53
SMG9-207ENST00000598860 DPF3Q92784 378 aa11.75□□□□□ -0.53
SMG9-207ENST00000598860 HTATIP2Q9BUP3 242 aa11.75□□□□□ -0.53
SMG9-207ENST00000598860 SRRTQ9BXP5 876 aaKnown RBP11.75□□□□□ -0.53
SMG9-207ENST00000598860 DIS3Q9Y2L1 958 aaKnown RBP11.75□□□□□ -0.53
SMG9-207ENST00000598860 RIPK3Q9Y572 518 aa11.75□□□□□ -0.53
SMG9-207ENST00000598860 PFASO15067 1338 aa11.75□□□□□ -0.53
SMG9-207ENST00000598860 CCDC194A0A1B0GVG4 234 aa11.74□□□□□ -0.53
SMG9-207ENST00000598860 EIF4EBP3O60516 100 aaPredicted RBP11.74□□□□□ -0.53
SMG9-207ENST00000598860 BPNT1O95861 308 aa11.74□□□□□ -0.53
SMG9-207ENST00000598860 PGK2P07205 417 aa11.74□□□□□ -0.53
SMG9-207ENST00000598860 U2AF2P26368 475 aaKnown RBP eCLIP11.74□□□□□ -0.53
SMG9-207ENST00000598860 CNGA1P29973 690 aa11.74□□□□□ -0.53
SMG9-207ENST00000598860 ETFBP38117 255 aa11.74□□□□□ -0.53
SMG9-207ENST00000598860 HSD17B4P51659 736 aa11.74□□□□□ -0.53
SMG9-207ENST00000598860 PTPN11Q06124 597 aaPredicted RBP11.74□□□□□ -0.53
SMG9-207ENST00000598860 CCDC81Q6ZN84 652 aa11.74□□□□□ -0.53
SMG9-207ENST00000598860 NECAB2Q7Z6G3 386 aa11.74□□□□□ -0.53
SMG9-207ENST00000598860 CLEC4DQ8WXI8 215 aa11.74□□□□□ -0.53
SMG9-207ENST00000598860 PAWRQ96IZ0 340 aaKnown RBP11.74□□□□□ -0.53
SMG9-207ENST00000598860 MAML3Q96JK9 1138 aa11.74□□□□□ -0.53
SMG9-207ENST00000598860 NRSN2Q9GZP1 204 aa11.74□□□□□ -0.53
SMG9-207ENST00000598860 OSBPL2Q9H1P3 480 aa11.74□□□□□ -0.53
SMG9-207ENST00000598860 HOMER2Q9NSB8 354 aa11.74□□□□□ -0.53
SMG9-207ENST00000598860 GJB4Q9NTQ9 266 aa11.74□□□□□ -0.53
SMG9-207ENST00000598860 OGDHLQ9ULD0 1010 aa11.74□□□□□ -0.53
SMG9-207ENST00000598860 PPT2Q9UMR5 302 aa11.74□□□□□ -0.53
SMG9-207ENST00000598860 NOL7Q9UMY1 257 aaKnown RBP11.74□□□□□ -0.53
SMG9-207ENST00000598860 LRRC37A2A6NM11 1700 aa11.74□□□□□ -0.53
SMG9-207ENST00000598860 LOC100289279A0A1B0GTE1 492 aa11.73□□□□□ -0.53
SMG9-207ENST00000598860 BTBD18B2RXH4 712 aa11.73□□□□□ -0.53
SMG9-207ENST00000598860 MEIS2O14770 477 aa11.73□□□□□ -0.53
SMG9-207ENST00000598860 MSCO60682 206 aa11.73□□□□□ -0.53
SMG9-207ENST00000598860 CFBP00751 764 aa11.73□□□□□ -0.53
SMG9-207ENST00000598860 CYP11A1P05108 521 aa11.73□□□□□ -0.53
SMG9-207ENST00000598860 NONOQ15233 471 aaKnown RBP eCLIP11.73□□□□□ -0.53
SMG9-207ENST00000598860 POU4F3Q15319 338 aa11.73□□□□□ -0.53
SMG9-207ENST00000598860 ZNF792Q3KQV3 632 aa11.73□□□□□ -0.53
SMG9-207ENST00000598860 MUM1L1Q5H9M0 696 aa11.73□□□□□ -0.53
SMG9-207ENST00000598860 RNF207Q6ZRF8 634 aa11.73□□□□□ -0.53
SMG9-207ENST00000598860 NOSTRINQ8IVI9 506 aa11.73□□□□□ -0.53
SMG9-207ENST00000598860 NAP1L4Q99733 375 aaKnown RBP11.73□□□□□ -0.53
SMG9-207ENST00000598860 RUSC1Q9BVN2 902 aa11.73□□□□□ -0.53
SMG9-207ENST00000598860 DDX20Q9UHI6 824 aaKnown RBP11.73□□□□□ -0.53
SMG9-207ENST00000598860 PCDHA6Q9UN73 950 aa11.73□□□□□ -0.53
SMG9-207ENST00000598860 PCDHA8Q9Y5H6 950 aa11.73□□□□□ -0.53
SMG9-207ENST00000598860 CEP290O15078 2479 aa11.72□□□□□ -0.53
SMG9-207ENST00000598860 LOC102724159A0A0B4J2E5 919 aa11.72□□□□□ -0.53
SMG9-207ENST00000598860 NFIBO00712 420 aa11.72□□□□□ -0.53
SMG9-207ENST00000598860 CYBAP13498 195 aa11.72□□□□□ -0.53
SMG9-207ENST00000598860 MAOBP27338 520 aa11.72□□□□□ -0.53
SMG9-207ENST00000598860 MCM4P33991 863 aa11.72□□□□□ -0.53
SMG9-207ENST00000598860 TRAPPC10P48553 1259 aa11.72□□□□□ -0.53
SMG9-207ENST00000598860 RESTQ13127 1097 aa11.72□□□□□ -0.53
SMG9-207ENST00000598860 PKP1Q13835 747 aa11.72□□□□□ -0.53
SMG9-207ENST00000598860 PWP2Q15269 919 aaKnown RBP11.72□□□□□ -0.53
SMG9-207ENST00000598860 RILPL1Q5EBL4 403 aa11.72□□□□□ -0.53
SMG9-207ENST00000598860 PRAMEF19Q5SWL8 479 aa11.72□□□□□ -0.53
SMG9-207ENST00000598860 ATL3Q6DD88 541 aa11.72□□□□□ -0.53
SMG9-207ENST00000598860 NSMFQ6X4W1 530 aa11.72□□□□□ -0.53
SMG9-207ENST00000598860 NOP9Q86U38 636 aaKnown RBP11.72□□□□□ -0.53
SMG9-207ENST00000598860 ANKRD35Q8N283 1001 aa11.72□□□□□ -0.53
SMG9-207ENST00000598860 TRPV1Q8NER1 839 aa11.72□□□□□ -0.53
SMG9-207ENST00000598860 ANAPC16Q96DE5 110 aa11.72□□□□□ -0.53
SMG9-207ENST00000598860 SHDQ96IW2 340 aa11.72□□□□□ -0.53
SMG9-207ENST00000598860 MEGF10Q96KG7 1140 aa11.72□□□□□ -0.53
SMG9-207ENST00000598860 ANO3Q9BYT9 981 aa11.72□□□□□ -0.53
SMG9-207ENST00000598860 ZSWIM4Q9H7M6 989 aa11.72□□□□□ -0.53
SMG9-207ENST00000598860 A1CFQ9NQ94 594 aaKnown RBP11.72□□□□□ -0.53
SMG9-207ENST00000598860 CACNA2D2Q9NY47 1150 aa11.72□□□□□ -0.53
SMG9-207ENST00000598860 WDR81Q562E7 1941 aa11.72□□□□□ -0.53
SMG9-207ENST00000598860 CENPFP49454 3210 aa11.71□□□□□ -0.53
SMG9-207ENST00000598860 FRMPD4Q14CM0 1322 aa11.71□□□□□ -0.53
SMG9-207ENST00000598860 DNAJC25-GNG10A0A024R161 153 aa11.71□□□□□ -0.53
SMG9-207ENST00000598860 B4DLN1 442 aa11.71□□□□□ -0.53
SMG9-207ENST00000598860 DLGAP3O95886 979 aa11.71□□□□□ -0.53
SMG9-207ENST00000598860 CTSBP07858 339 aa11.71□□□□□ -0.53
SMG9-207ENST00000598860 GLB1P16278 677 aa11.71□□□□□ -0.53
SMG9-207ENST00000598860 RPS6P62753 249 aaKnown RBP11.71□□□□□ -0.53
SMG9-207ENST00000598860 RPL6Q02878 288 aaKnown RBP11.71□□□□□ -0.53
SMG9-207ENST00000598860 ORC2Q13416 577 aaPredicted RBP11.71□□□□□ -0.53
SMG9-207ENST00000598860 DOC2BQ14184 412 aa11.71□□□□□ -0.53
SMG9-207ENST00000598860 UBE2SQ16763 222 aa11.71□□□□□ -0.53
SMG9-207ENST00000598860 JAKMIP3Q5VZ66 844 aa11.71□□□□□ -0.53
SMG9-207ENST00000598860 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.71□□□□□ -0.53
SMG9-207ENST00000598860 FERMT3Q86UX7 667 aa11.71□□□□□ -0.53
SMG9-207ENST00000598860 MSL3Q8N5Y2 521 aaKnown RBP11.71□□□□□ -0.53
SMG9-207ENST00000598860 DNERQ8NFT8 737 aa11.71□□□□□ -0.53
SMG9-207ENST00000598860 DIS3LQ8TF46 1054 aaKnown RBP11.71□□□□□ -0.53
SMG9-207ENST00000598860 ZNF396Q96N95 335 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms