RNA–Protein interactions for RNA: ENST00000592083.5

ERCC1-214, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-214ENST00000592083 TRAIPQ9BWF2 469 aa16.68■□□□□ 0.26
ERCC1-214ENST00000592083 MFSD1Q9H3U5 465 aa16.68■□□□□ 0.26
ERCC1-214ENST00000592083 SPG21Q9NZD8 308 aa16.68■□□□□ 0.26
ERCC1-214ENST00000592083 INPP5FQ9Y2H2 1132 aa16.68■□□□□ 0.26
ERCC1-214ENST00000592083 PCDHB2Q9Y5E7 798 aa16.68■□□□□ 0.26
ERCC1-214ENST00000592083 USO1O60763 962 aaKnown RBP16.67■□□□□ 0.26
ERCC1-214ENST00000592083 DGAT1O75907 488 aa16.67■□□□□ 0.26
ERCC1-214ENST00000592083 CXCL14O95715 111 aa16.67■□□□□ 0.26
ERCC1-214ENST00000592083 HOXA11P31270 313 aaPredicted RBP16.67■□□□□ 0.26
ERCC1-214ENST00000592083 CA8P35219 290 aa16.67■□□□□ 0.26
ERCC1-214ENST00000592083 ARL2P36404 184 aa16.67■□□□□ 0.26
ERCC1-214ENST00000592083 TOB1P50616 345 aaPredicted RBP16.67■□□□□ 0.26
ERCC1-214ENST00000592083 ITIH3Q06033 890 aa16.67■□□□□ 0.26
ERCC1-214ENST00000592083 UBXN11Q5T124 520 aa16.67■□□□□ 0.26
ERCC1-214ENST00000592083 POTEGQ6S5H5 508 aa16.67■□□□□ 0.26
ERCC1-214ENST00000592083 ERMP1Q7Z2K6 904 aa16.67■□□□□ 0.26
ERCC1-214ENST00000592083 C4orf32Q8N8J7 132 aa16.67■□□□□ 0.26
ERCC1-214ENST00000592083 TMX3Q96JJ7 454 aa16.67■□□□□ 0.26
ERCC1-214ENST00000592083 UPF2Q9HAU5 1272 aaKnown RBP16.67■□□□□ 0.26
ERCC1-214ENST00000592083 TUFT1Q9NNX1 390 aa16.67■□□□□ 0.26
ERCC1-214ENST00000592083 GPRC5CQ9NQ84 441 aa16.67■□□□□ 0.26
ERCC1-214ENST00000592083 NOL7Q9UMY1 257 aaKnown RBP16.67■□□□□ 0.26
ERCC1-214ENST00000592083 INO80B-WBP1J3KQ70 363 aa16.66■□□□□ 0.26
ERCC1-214ENST00000592083 OFD1O75665 1012 aa16.66■□□□□ 0.26
ERCC1-214ENST00000592083 SKIP12755 728 aa16.66■□□□□ 0.26
ERCC1-214ENST00000592083 GLRA2P23416 452 aa16.66■□□□□ 0.26
ERCC1-214ENST00000592083 U2AF2P26368 475 aaKnown RBP eCLIP16.66■□□□□ 0.26
ERCC1-214ENST00000592083 PTENP60484 403 aa16.66■□□□□ 0.26
ERCC1-214ENST00000592083 CAPSQ13938 189 aa16.66■□□□□ 0.26
ERCC1-214ENST00000592083 MXD4Q14582 209 aaPredicted RBP16.66■□□□□ 0.26
ERCC1-214ENST00000592083 AUTS2Q8WXX7 1259 aa16.66■□□□□ 0.26
ERCC1-214ENST00000592083 CPB2Q96IY4 423 aa16.66■□□□□ 0.26
ERCC1-214ENST00000592083 NECTIN4Q96NY8 510 aa16.66■□□□□ 0.26
ERCC1-214ENST00000592083 POLR3FQ9H1D9 316 aaPredicted RBP16.66■□□□□ 0.26
ERCC1-214ENST00000592083 PCDHB6Q9Y5E3 794 aa16.66■□□□□ 0.26
ERCC1-214ENST00000592083 TSPAN1O60635 241 aa16.65■□□□□ 0.26
ERCC1-214ENST00000592083 ZNF623O75123 536 aa16.65■□□□□ 0.26
ERCC1-214ENST00000592083 ZC3H11AO75152 810 aaKnown RBP eCLIP16.65■□□□□ 0.26
ERCC1-214ENST00000592083 ERLIN2O94905 339 aa16.65■□□□□ 0.26
ERCC1-214ENST00000592083 XRCC6P12956 609 aaKnown RBP eCLIP16.65■□□□□ 0.26
ERCC1-214ENST00000592083 NPR3P17342 541 aa16.65■□□□□ 0.26
ERCC1-214ENST00000592083 MTHFRP42898 656 aa16.65■□□□□ 0.26
ERCC1-214ENST00000592083 TRAPPC10P48553 1259 aa16.65■□□□□ 0.26
ERCC1-214ENST00000592083 RAB27AP51159 221 aa16.65■□□□□ 0.26
ERCC1-214ENST00000592083 CLCN5P51795 746 aa16.65■□□□□ 0.26
ERCC1-214ENST00000592083 AFF1P51825 1210 aaKnown RBP16.65■□□□□ 0.26
ERCC1-214ENST00000592083 BCAR1P56945 870 aa16.65■□□□□ 0.26
ERCC1-214ENST00000592083 ORC2Q13416 577 aaPredicted RBP16.65■□□□□ 0.26
ERCC1-214ENST00000592083 TFDP1Q14186 410 aa16.65■□□□□ 0.26
ERCC1-214ENST00000592083 SMC1AQ14683 1233 aaKnown RBP16.65■□□□□ 0.26
ERCC1-214ENST00000592083 NOMO2Q5JPE7 1267 aa16.65■□□□□ 0.26
ERCC1-214ENST00000592083 MCTP1Q6DN14 999 aa16.65■□□□□ 0.26
ERCC1-214ENST00000592083 GLB1LQ6UWU2 654 aa16.65■□□□□ 0.26
ERCC1-214ENST00000592083 ZDHHC14Q8IZN3 488 aa16.65■□□□□ 0.26
ERCC1-214ENST00000592083 SLC39A11Q8N1S5 342 aa16.65■□□□□ 0.26
ERCC1-214ENST00000592083 ERMNQ8TAM6 284 aa16.65■□□□□ 0.26
ERCC1-214ENST00000592083 POLR3CQ9BUI4 534 aaPredicted RBP16.65■□□□□ 0.26
ERCC1-214ENST00000592083 MRPL9Q9BYD2 267 aaKnown RBP16.65■□□□□ 0.26
ERCC1-214ENST00000592083 GBP3Q9H0R5 595 aa16.65■□□□□ 0.26
ERCC1-214ENST00000592083 TBC1D13Q9NVG8 400 aa16.65■□□□□ 0.26
ERCC1-214ENST00000592083 DBR1Q9UK59 544 aaKnown RBP16.65■□□□□ 0.26
ERCC1-214ENST00000592083 EPCAMP16422 314 aa16.64■□□□□ 0.25
ERCC1-214ENST00000592083 PPM1AP35813 382 aa16.64■□□□□ 0.25
ERCC1-214ENST00000592083 ALDH7A1P49419 539 aaKnown RBP16.64■□□□□ 0.25
ERCC1-214ENST00000592083 MBTD1Q05BQ5 628 aa16.64■□□□□ 0.25
ERCC1-214ENST00000592083 PTGDRQ13258 359 aa16.64■□□□□ 0.25
ERCC1-214ENST00000592083 ECM1Q16610 540 aa16.64■□□□□ 0.25
ERCC1-214ENST00000592083 ATAT1Q5SQI0 421 aa16.64■□□□□ 0.25
ERCC1-214ENST00000592083 CWF19L1Q69YN2 538 aaKnown RBP16.64■□□□□ 0.25
ERCC1-214ENST00000592083 AGMOQ6ZNB7 445 aa16.64■□□□□ 0.25
ERCC1-214ENST00000592083 MRPL10Q7Z7H8 261 aaKnown RBP16.64■□□□□ 0.25
ERCC1-214ENST00000592083 TMEM173Q86WV6 379 aaPredicted RBP16.64■□□□□ 0.25
ERCC1-214ENST00000592083 TDRD5Q8NAT2 981 aaKnown RBP16.64■□□□□ 0.25
ERCC1-214ENST00000592083 PGBD4Q96DM1 585 aa16.64■□□□□ 0.25
ERCC1-214ENST00000592083 NACC1Q96RE7 527 aa16.64■□□□□ 0.25
ERCC1-214ENST00000592083 EIF2AQ9BY44 585 aaKnown RBP16.64■□□□□ 0.25
ERCC1-214ENST00000592083 NRDE2Q9H7Z3 1164 aa16.64■□□□□ 0.25
ERCC1-214ENST00000592083 POLD4Q9HCU8 107 aa16.64■□□□□ 0.25
ERCC1-214ENST00000592083 WDR87Q6ZQQ6 2873 aa16.64■□□□□ 0.25
ERCC1-214ENST00000592083 B4GALT5O43286 388 aa16.63■□□□□ 0.25
ERCC1-214ENST00000592083 B4GALT3O60512 393 aa16.63■□□□□ 0.25
ERCC1-214ENST00000592083 RPA1P27694 616 aa16.63■□□□□ 0.25
ERCC1-214ENST00000592083 GJB2P29033 226 aa16.63■□□□□ 0.25
ERCC1-214ENST00000592083 CCT6AP40227 531 aaKnown RBP16.63■□□□□ 0.25
ERCC1-214ENST00000592083 RNASELQ05823 741 aaKnown RBP16.63■□□□□ 0.25
ERCC1-214ENST00000592083 AMHR2Q16671 573 aa16.63■□□□□ 0.25
ERCC1-214ENST00000592083 PADI6Q6TGC4 694 aa16.63■□□□□ 0.25
ERCC1-214ENST00000592083 CDR2LQ86X02 465 aaPredicted RBP16.63■□□□□ 0.25
ERCC1-214ENST00000592083 ZNF280BQ86YH2 543 aa16.63■□□□□ 0.25
ERCC1-214ENST00000592083 SMG8Q8ND04 991 aaKnown RBP16.63■□□□□ 0.25
ERCC1-214ENST00000592083 BCL7CQ8WUZ0 217 aaPredicted RBP16.63■□□□□ 0.25
ERCC1-214ENST00000592083 TBC1D32Q96NH3 1257 aa16.63■□□□□ 0.25
ERCC1-214ENST00000592083 RNF39Q9H2S5 420 aa16.63■□□□□ 0.25
ERCC1-214ENST00000592083 DNAJB4Q9UDY4 337 aa16.63■□□□□ 0.25
ERCC1-214ENST00000592083 LRWD1Q9UFC0 647 aa16.63■□□□□ 0.25
ERCC1-214ENST00000592083 HES2Q9Y543 173 aa16.63■□□□□ 0.25
ERCC1-214ENST00000592083 ARHGEF35A5YM69 484 aa16.62■□□□□ 0.25
ERCC1-214ENST00000592083 LRRIQ4A6NIV6 560 aa16.62■□□□□ 0.25
ERCC1-214ENST00000592083 DDHD2O94830 711 aa16.62■□□□□ 0.25
ERCC1-214ENST00000592083 POMCP01189 267 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms