RNA–Protein interactions for RNA: ENST00000588454.5

CALR-206, Transcript of calreticulin, humanhuman

TSL 3

Gene CALR, Length 776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-206ENST00000588454 SLC2A4RGQ9NR83 387 aa12.42□□□□□ -0.42
CALR-206ENST00000588454 MARCH5Q9NX47 278 aa12.42□□□□□ -0.42
CALR-206ENST00000588454 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.42□□□□□ -0.42
CALR-206ENST00000588454 CHD6Q8TD26 2715 aa12.42□□□□□ -0.42
CALR-206ENST00000588454 CYP3A7-CYP3A51PA0A087WV96 503 aa12.41□□□□□ -0.42
CALR-206ENST00000588454 GAS2O43903 313 aaKnown RBP12.41□□□□□ -0.42
CALR-206ENST00000588454 HMGB1P09429 215 aaKnown RBP12.41□□□□□ -0.42
CALR-206ENST00000588454 GLULP15104 373 aa12.41□□□□□ -0.42
CALR-206ENST00000588454 NCLP19338 710 aaKnown RBP12.41□□□□□ -0.42
CALR-206ENST00000588454 CYP3A7P24462 503 aa12.41□□□□□ -0.42
CALR-206ENST00000588454 GLUD2P49448 558 aa12.41□□□□□ -0.42
CALR-206ENST00000588454 STARD6P59095 220 aa12.41□□□□□ -0.42
CALR-206ENST00000588454 DSG1Q02413 1049 aa12.41□□□□□ -0.42
CALR-206ENST00000588454 HTR4Q13639 388 aa12.41□□□□□ -0.42
CALR-206ENST00000588454 DCLRE1AQ6PJP8 1040 aa12.41□□□□□ -0.42
CALR-206ENST00000588454 SRGAP1Q7Z6B7 1085 aa12.41□□□□□ -0.42
CALR-206ENST00000588454 CNNM3Q8NE01 707 aa12.41□□□□□ -0.42
CALR-206ENST00000588454 BORCS6Q96GS4 357 aa12.41□□□□□ -0.42
CALR-206ENST00000588454 NLRP4Q96MN2 994 aa12.41□□□□□ -0.42
CALR-206ENST00000588454 NT5C3AQ9H0P0 336 aa12.41□□□□□ -0.42
CALR-206ENST00000588454 MINDY3Q9H8M7 445 aa12.41□□□□□ -0.42
CALR-206ENST00000588454 UBN1Q9NPG3 1134 aa12.41□□□□□ -0.42
CALR-206ENST00000588454 ARHGEF3Q9NR81 526 aa12.41□□□□□ -0.42
CALR-206ENST00000588454 CHST7Q9NS84 486 aa12.41□□□□□ -0.42
CALR-206ENST00000588454 NAP1L2Q9ULW6 460 aaPredicted RBP12.41□□□□□ -0.42
CALR-206ENST00000588454 COL4A3BPQ9Y5P4 624 aa12.41□□□□□ -0.42
CALR-206ENST00000588454 CFAP47Q6ZTR5 3102 aa12.41□□□□□ -0.42
CALR-206ENST00000588454 SPATA31D3P0C874 917 aa12.4□□□□□ -0.42
CALR-206ENST00000588454 MYBP10242 640 aa12.4□□□□□ -0.42
CALR-206ENST00000588454 PSMC5P62195 406 aa12.4□□□□□ -0.42
CALR-206ENST00000588454 AKAP17AQ02040 695 aaKnown RBP12.4□□□□□ -0.42
CALR-206ENST00000588454 DSC1Q08554 894 aa12.4□□□□□ -0.42
CALR-206ENST00000588454 KRT32Q14532 448 aa12.4□□□□□ -0.42
CALR-206ENST00000588454 NTRK3Q16288 839 aa12.4□□□□□ -0.42
CALR-206ENST00000588454 LILRA6Q6PI73 481 aa12.4□□□□□ -0.42
CALR-206ENST00000588454 SPATA31D4Q6ZUB0 917 aa12.4□□□□□ -0.42
CALR-206ENST00000588454 GPR65Q8IYL9 337 aa12.4□□□□□ -0.42
CALR-206ENST00000588454 MAML2Q8IZL2 1156 aaPredicted RBP12.4□□□□□ -0.42
CALR-206ENST00000588454 SMG8Q8ND04 991 aaKnown RBP12.4□□□□□ -0.42
CALR-206ENST00000588454 CCDC148Q8NFR7 591 aa12.4□□□□□ -0.42
CALR-206ENST00000588454 PRPF31Q8WWY3 499 aaKnown RBP12.4□□□□□ -0.42
CALR-206ENST00000588454 PHKBQ93100 1093 aa12.4□□□□□ -0.42
CALR-206ENST00000588454 MBOAT7Q96N66 472 aa12.4□□□□□ -0.42
CALR-206ENST00000588454 HINFPQ9BQA5 517 aa12.4□□□□□ -0.42
CALR-206ENST00000588454 PRKD2Q9BZL6 878 aa12.4□□□□□ -0.42
CALR-206ENST00000588454 ZDHHC7Q9NXF8 308 aa12.4□□□□□ -0.42
CALR-206ENST00000588454 PRG3Q9Y2Y8 225 aaPredicted RBP12.4□□□□□ -0.42
CALR-206ENST00000588454 ZFP37Q9Y6Q3 630 aaPredicted RBP12.4□□□□□ -0.42
CALR-206ENST00000588454 NID2Q14112 1375 aa12.4□□□□□ -0.42
CALR-206ENST00000588454 ARL5CA6NH57 179 aa12.39□□□□□ -0.43
CALR-206ENST00000588454 POTEMA6NI47 508 aa12.39□□□□□ -0.43
CALR-206ENST00000588454 TGM5O43548 720 aa12.39□□□□□ -0.43
CALR-206ENST00000588454 CDC45O75419 566 aa12.39□□□□□ -0.43
CALR-206ENST00000588454 SRGAP2CP0DJJ0 459 aa12.39□□□□□ -0.43
CALR-206ENST00000588454 ITGA4P13612 1032 aa12.39□□□□□ -0.43
CALR-206ENST00000588454 OR1G1P47890 313 aa12.39□□□□□ -0.43
CALR-206ENST00000588454 NPEPPSP55786 919 aa12.39□□□□□ -0.43
CALR-206ENST00000588454 RSPO4Q2I0M5 234 aaPredicted RBP12.39□□□□□ -0.43
CALR-206ENST00000588454 ZNF528Q3MIS6 628 aa12.39□□□□□ -0.43
CALR-206ENST00000588454 Q6ZUG5 572 aa12.39□□□□□ -0.43
CALR-206ENST00000588454 PALB2Q86YC2 1186 aa12.39□□□□□ -0.43
CALR-206ENST00000588454 EXOC8Q8IYI6 725 aa12.39□□□□□ -0.43
CALR-206ENST00000588454 PJA1Q8NG27 643 aa12.39□□□□□ -0.43
CALR-206ENST00000588454 ETNPPLQ8TBG4 499 aa12.39□□□□□ -0.43
CALR-206ENST00000588454 TBCKQ8TEA7 893 aa12.39□□□□□ -0.43
CALR-206ENST00000588454 SHDQ96IW2 340 aa12.39□□□□□ -0.43
CALR-206ENST00000588454 RNF26Q9BY78 433 aaPredicted RBP12.39□□□□□ -0.43
CALR-206ENST00000588454 FOXQ1Q9C009 403 aa12.39□□□□□ -0.43
CALR-206ENST00000588454 RNF39Q9H2S5 420 aa12.39□□□□□ -0.43
CALR-206ENST00000588454 DHX33Q9H6R0 707 aaKnown RBP12.39□□□□□ -0.43
CALR-206ENST00000588454 PIDD1Q9HB75 910 aa12.39□□□□□ -0.43
CALR-206ENST00000588454 SH3GLB2Q9NR46 395 aa12.39□□□□□ -0.43
CALR-206ENST00000588454 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.39□□□□□ -0.43
CALR-206ENST00000588454 MIOSQ9NXC5 875 aa12.39□□□□□ -0.43
CALR-206ENST00000588454 FNIP2Q9P278 1114 aa12.39□□□□□ -0.43
CALR-206ENST00000588454 PPME1Q9Y570 386 aa12.39□□□□□ -0.43
CALR-206ENST00000588454 NUMBLQ9Y6R0 609 aa12.39□□□□□ -0.43
CALR-206ENST00000588454 MIA3Q5JRA6 1907 aa12.39□□□□□ -0.43
CALR-206ENST00000588454 MAP1BP46821 2468 aaKnown RBP12.38□□□□□ -0.43
CALR-206ENST00000588454 ZFHX4Q86UP3 3567 aa12.38□□□□□ -0.43
CALR-206ENST00000588454 F8W810 466 aa12.38□□□□□ -0.43
CALR-206ENST00000588454 ASAP2O43150 1006 aa12.38□□□□□ -0.43
CALR-206ENST00000588454 LRRN2O75325 713 aa12.38□□□□□ -0.43
CALR-206ENST00000588454 TDP2O95551 362 aa12.38□□□□□ -0.43
CALR-206ENST00000588454 GPC5P78333 572 aa12.38□□□□□ -0.43
CALR-206ENST00000588454 FGD1P98174 961 aa12.38□□□□□ -0.43
CALR-206ENST00000588454 LAMTOR4Q0VGL1 99 aa12.38□□□□□ -0.43
CALR-206ENST00000588454 PLA2G4FQ68DD2 849 aa12.38□□□□□ -0.43
CALR-206ENST00000588454 FBXL16Q8N461 479 aa12.38□□□□□ -0.43
CALR-206ENST00000588454 ZNF579Q8NAF0 562 aaKnown RBP12.38□□□□□ -0.43
CALR-206ENST00000588454 SLC7A3Q8WY07 619 aa12.38□□□□□ -0.43
CALR-206ENST00000588454 BRF1Q92994 677 aa12.38□□□□□ -0.43
CALR-206ENST00000588454 TMEM143Q96AN5 459 aa12.38□□□□□ -0.43
CALR-206ENST00000588454 GAD1Q99259 594 aa12.38□□□□□ -0.43
CALR-206ENST00000588454 RPP25Q9BUL9 199 aaKnown RBP12.38□□□□□ -0.43
CALR-206ENST00000588454 DDX23Q9BUQ8 820 aaKnown RBP12.38□□□□□ -0.43
CALR-206ENST00000588454 COLEC11Q9BWP8 271 aa12.38□□□□□ -0.43
CALR-206ENST00000588454 C22orf23Q9BZE7 217 aa12.38□□□□□ -0.43
CALR-206ENST00000588454 VPS54Q9P1Q0 977 aa12.38□□□□□ -0.43
CALR-206ENST00000588454 FBXO4Q9UKT5 387 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms