RNA–Protein interactions for RNA: ENST00000586059.5

CNN1-204, Transcript of calponin 1, humanhuman

TSL 3

Gene CNN1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-204ENST00000586059 ABI1Q8IZP0 508 aa13.26□□□□□ -0.29
CNN1-204ENST00000586059 HELQQ8TDG4 1101 aa13.26□□□□□ -0.29
CNN1-204ENST00000586059 IPO9Q96P70 1041 aaKnown RBP13.26□□□□□ -0.29
CNN1-204ENST00000586059 NTPCRQ9BSD7 190 aaKnown RBP13.26□□□□□ -0.29
CNN1-204ENST00000586059 APOL6Q9BWW8 343 aa13.26□□□□□ -0.29
CNN1-204ENST00000586059 MRPL4Q9BYD3 311 aaKnown RBP13.26□□□□□ -0.29
CNN1-204ENST00000586059 LRRC27Q9C0I9 530 aa13.26□□□□□ -0.29
CNN1-204ENST00000586059 SEMA6BQ9H3T3 888 aa13.26□□□□□ -0.29
CNN1-204ENST00000586059 GOLPH3LQ9H4A5 285 aa13.26□□□□□ -0.29
CNN1-204ENST00000586059 PDZD7Q9H5P4 517 aa13.26□□□□□ -0.29
CNN1-204ENST00000586059 RNF19AQ9NV58 838 aa13.26□□□□□ -0.29
CNN1-204ENST00000586059 SERTAD1Q9UHV2 236 aa13.26□□□□□ -0.29
CNN1-204ENST00000586059 HPSEQ9Y251 543 aa13.26□□□□□ -0.29
CNN1-204ENST00000586059 IPPQ9Y573 584 aa13.26□□□□□ -0.29
CNN1-204ENST00000586059 CDH23Q9H251 3354 aa13.26□□□□□ -0.29
CNN1-204ENST00000586059 PLXNA4Q9HCM2 1894 aa13.25□□□□□ -0.29
CNN1-204ENST00000586059 A0A1B0GUA9 196 aa13.25□□□□□ -0.29
CNN1-204ENST00000586059 MEIS3P2A8K0S8 358 aa13.25□□□□□ -0.29
CNN1-204ENST00000586059 ACTN4O43707 911 aaKnown RBP13.25□□□□□ -0.29
CNN1-204ENST00000586059 ZNF623O75123 536 aa13.25□□□□□ -0.29
CNN1-204ENST00000586059 GAP43P17677 238 aa13.25□□□□□ -0.29
CNN1-204ENST00000586059 AFMP43652 599 aa13.25□□□□□ -0.29
CNN1-204ENST00000586059 CLLU1OSQ5K130 101 aa13.25□□□□□ -0.29
CNN1-204ENST00000586059 ATF7IP2Q5U623 682 aa13.25□□□□□ -0.29
CNN1-204ENST00000586059 EEF1DP3Q658K8 133 aa13.25□□□□□ -0.29
CNN1-204ENST00000586059 HAUS6Q7Z4H7 955 aa13.25□□□□□ -0.29
CNN1-204ENST00000586059 CCDC65Q8IXS2 484 aa13.25□□□□□ -0.29
CNN1-204ENST00000586059 GRAMD1CQ8IYS0 662 aa13.25□□□□□ -0.29
CNN1-204ENST00000586059 HACE1Q8IYU2 909 aa13.25□□□□□ -0.29
CNN1-204ENST00000586059 ARNTL2Q8WYA1 636 aa13.25□□□□□ -0.29
CNN1-204ENST00000586059 PGBD4Q96DM1 585 aa13.25□□□□□ -0.29
CNN1-204ENST00000586059 TGS1Q96RS0 853 aaKnown RBP13.25□□□□□ -0.29
CNN1-204ENST00000586059 ADPGKQ9BRR6 497 aa13.25□□□□□ -0.29
CNN1-204ENST00000586059 TRIM9Q9C026 710 aa13.25□□□□□ -0.29
CNN1-204ENST00000586059 TMEM117Q9H0C3 514 aa13.25□□□□□ -0.29
CNN1-204ENST00000586059 NXF3Q9H4D5 531 aaKnown RBP13.25□□□□□ -0.29
CNN1-204ENST00000586059 PANK4Q9NVE7 773 aa13.25□□□□□ -0.29
CNN1-204ENST00000586059 TBC1D7Q9P0N9 293 aa13.25□□□□□ -0.29
CNN1-204ENST00000586059 SEL1LQ9UBV2 794 aa13.25□□□□□ -0.29
CNN1-204ENST00000586059 MRPL42Q9Y6G3 142 aaKnown RBP13.25□□□□□ -0.29
CNN1-204ENST00000586059 PDCD11Q14690 1871 aaKnown RBP13.25□□□□□ -0.29
CNN1-204ENST00000586059 MYO7AQ13402 2215 aa13.24□□□□□ -0.29
CNN1-204ENST00000586059 FAM237AA0A1B0GTK4 181 aa13.24□□□□□ -0.29
CNN1-204ENST00000586059 SLFN14P0C7P3 912 aa13.24□□□□□ -0.29
CNN1-204ENST00000586059 ITGA4P13612 1032 aa13.24□□□□□ -0.29
CNN1-204ENST00000586059 CASP1P29466 404 aa13.24□□□□□ -0.29
CNN1-204ENST00000586059 NMT1P30419 496 aaKnown RBP13.24□□□□□ -0.29
CNN1-204ENST00000586059 CTNNB1P35222 781 aa13.24□□□□□ -0.29
CNN1-204ENST00000586059 COASYQ13057 564 aa13.24□□□□□ -0.29
CNN1-204ENST00000586059 GRIN2CQ14957 1233 aa13.24□□□□□ -0.29
CNN1-204ENST00000586059 CSPP1Q1MSJ5 1256 aa13.24□□□□□ -0.29
CNN1-204ENST00000586059 DCAF4L1Q3SXM0 396 aa13.24□□□□□ -0.29
CNN1-204ENST00000586059 ZNF568Q3ZCX4 644 aa13.24□□□□□ -0.29
CNN1-204ENST00000586059 HERC4Q5GLZ8 1057 aaPredicted RBP13.24□□□□□ -0.29
CNN1-204ENST00000586059 SPOUT1Q5T280 376 aaKnown RBP13.24□□□□□ -0.29
CNN1-204ENST00000586059 GLB1LQ6UWU2 654 aa13.24□□□□□ -0.29
CNN1-204ENST00000586059 AGMOQ6ZNB7 445 aa13.24□□□□□ -0.29
CNN1-204ENST00000586059 MRPL10Q7Z7H8 261 aaKnown RBP13.24□□□□□ -0.29
CNN1-204ENST00000586059 SMG8Q8ND04 991 aaKnown RBP13.24□□□□□ -0.29
CNN1-204ENST00000586059 SLC17A8Q8NDX2 589 aa13.24□□□□□ -0.29
CNN1-204ENST00000586059 CNNM3Q8NE01 707 aa13.24□□□□□ -0.29
CNN1-204ENST00000586059 BICD1Q96G01 975 aa13.24□□□□□ -0.29
CNN1-204ENST00000586059 CASD1Q96PB1 797 aa13.24□□□□□ -0.29
CNN1-204ENST00000586059 FIZ1Q96SL8 496 aa13.24□□□□□ -0.29
CNN1-204ENST00000586059 ACO2Q99798 780 aaKnown RBP13.24□□□□□ -0.29
CNN1-204ENST00000586059 C17orf80Q9BSJ5 609 aa13.24□□□□□ -0.29
CNN1-204ENST00000586059 TARS2Q9BW92 718 aaKnown RBP13.24□□□□□ -0.29
CNN1-204ENST00000586059 BLZF1Q9H2G9 400 aa13.24□□□□□ -0.29
CNN1-204ENST00000586059 PRDM12Q9H4Q4 367 aa13.24□□□□□ -0.29
CNN1-204ENST00000586059 HCSTQ9UBK5 93 aa13.24□□□□□ -0.29
CNN1-204ENST00000586059 USP25Q9UHP3 1055 aa13.24□□□□□ -0.29
CNN1-204ENST00000586059 INPP5FQ9Y2H2 1132 aa13.24□□□□□ -0.29
CNN1-204ENST00000586059 HES2Q9Y543 173 aa13.24□□□□□ -0.29
CNN1-204ENST00000586059 PRRC2BQ5JSZ5 2229 aaKnown RBP13.24□□□□□ -0.29
CNN1-204ENST00000586059 FRMD3A2A2Y4 597 aa13.23□□□□□ -0.29
CNN1-204ENST00000586059 EPOPA6NHQ4 379 aa13.23□□□□□ -0.29
CNN1-204ENST00000586059 SCP2P22307 547 aa13.23□□□□□ -0.29
CNN1-204ENST00000586059 ERVK-21P61565 698 aa13.23□□□□□ -0.29
CNN1-204ENST00000586059 APBB1IPQ7Z5R6 666 aaPredicted RBP13.23□□□□□ -0.29
CNN1-204ENST00000586059 LRRC43Q8N309 656 aa13.23□□□□□ -0.29
CNN1-204ENST00000586059 FBXO22Q8NEZ5 403 aa13.23□□□□□ -0.29
CNN1-204ENST00000586059 GDPD5Q8WTR4 605 aa13.23□□□□□ -0.29
CNN1-204ENST00000586059 GUCD1Q96NT3 240 aa13.23□□□□□ -0.29
CNN1-204ENST00000586059 SAMD11Q96NU1 681 aa13.23□□□□□ -0.29
CNN1-204ENST00000586059 C7orf25Q9BPX7 421 aa13.23□□□□□ -0.29
CNN1-204ENST00000586059 MRPL44Q9H9J2 332 aaKnown RBP13.23□□□□□ -0.29
CNN1-204ENST00000586059 RSAD1Q9HA92 442 aa13.23□□□□□ -0.29
CNN1-204ENST00000586059 MTMR10Q9NXD2 777 aa13.23□□□□□ -0.29
CNN1-204ENST00000586059 ANKFY1Q9P2R3 1169 aa13.23□□□□□ -0.29
CNN1-204ENST00000586059 TBX20Q9UMR3 447 aa13.23□□□□□ -0.29
CNN1-204ENST00000586059 TNFSF13BQ9Y275 285 aa13.23□□□□□ -0.29
CNN1-204ENST00000586059 HNRNPDLO14979 420 aaKnown RBP13.22□□□□□ -0.29
CNN1-204ENST00000586059 GCNT3O95395 438 aa13.22□□□□□ -0.29
CNN1-204ENST00000586059 HARSP12081 509 aaKnown RBP13.22□□□□□ -0.29
CNN1-204ENST00000586059 ABCD1P33897 745 aa13.22□□□□□ -0.29
CNN1-204ENST00000586059 MATR3P43243 847 aaKnown RBP eCLIP13.22□□□□□ -0.29
CNN1-204ENST00000586059 LIG4P49917 911 aa13.22□□□□□ -0.29
CNN1-204ENST00000586059 CUL4BQ13620 913 aa13.22□□□□□ -0.29
CNN1-204ENST00000586059 EPC2Q52LR7 807 aa13.22□□□□□ -0.29
CNN1-204ENST00000586059 ZC2HC1CQ53FD0 456 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms