RNA–Protein interactions for RNA: ENST00000584911.1

LINC00473-205, long intergenic non-protein coding RNA 473, humanhuman

TSL 1 (best) BASIC

Gene LINC00473, Length 2,212 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473-205ENST00000584911 ZC3H3Q8IXZ2 948 aaKnown RBP12.85□□□□□ -0.35
LINC00473-205ENST00000584911 STK32AQ8WU08 396 aa12.85□□□□□ -0.35
LINC00473-205ENST00000584911 CKAP2Q8WWK9 683 aa12.85□□□□□ -0.35
LINC00473-205ENST00000584911 ERVK-5Q9HDB9 667 aa12.85□□□□□ -0.35
LINC00473-205ENST00000584911 BARHL2Q9NY43 387 aa12.85□□□□□ -0.35
LINC00473-205ENST00000584911 CYP39A1Q9NYL5 469 aa12.85□□□□□ -0.35
LINC00473-205ENST00000584911 SNX24Q9Y343 169 aa12.85□□□□□ -0.35
LINC00473-205ENST00000584911 C2CD2Q9Y426 696 aa12.85□□□□□ -0.35
LINC00473-205ENST00000584911 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.85□□□□□ -0.35
LINC00473-205ENST00000584911 RASGRF2O14827 1237 aa12.84□□□□□ -0.35
LINC00473-205ENST00000584911 SP100P23497 879 aaPredicted RBP12.84□□□□□ -0.35
LINC00473-205ENST00000584911 HIBADHP31937 336 aaKnown RBP12.84□□□□□ -0.35
LINC00473-205ENST00000584911 PTGIRP43119 386 aa12.84□□□□□ -0.35
LINC00473-205ENST00000584911 GYG1P46976 350 aa12.84□□□□□ -0.35
LINC00473-205ENST00000584911 DYNLL1P63167 89 aaKnown RBP12.84□□□□□ -0.35
LINC00473-205ENST00000584911 EVX2Q03828 476 aa12.84□□□□□ -0.35
LINC00473-205ENST00000584911 ACVR2BQ13705 512 aa12.84□□□□□ -0.35
LINC00473-205ENST00000584911 CGB2Q6NT52 195 aa12.84□□□□□ -0.35
LINC00473-205ENST00000584911 VSTM1Q6UX27 236 aa12.84□□□□□ -0.35
LINC00473-205ENST00000584911 APOBEC3FQ8IUX4 373 aaKnown RBP12.84□□□□□ -0.35
LINC00473-205ENST00000584911 ASAP3Q8TDY4 903 aa12.84□□□□□ -0.35
LINC00473-205ENST00000584911 FBF1Q8TES7 1133 aa12.84□□□□□ -0.35
LINC00473-205ENST00000584911 RAD54LQ92698 747 aa12.84□□□□□ -0.35
LINC00473-205ENST00000584911 EZH1Q92800 747 aaPredicted RBP12.84□□□□□ -0.35
LINC00473-205ENST00000584911 ROPN1BQ9BZX4 212 aaPredicted RBP12.84□□□□□ -0.35
LINC00473-205ENST00000584911 LRMDAQ9H2I8 198 aa12.84□□□□□ -0.35
LINC00473-205ENST00000584911 ROPN1Q9HAT0 212 aaPredicted RBP12.84□□□□□ -0.35
LINC00473-205ENST00000584911 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.84□□□□□ -0.35
LINC00473-205ENST00000584911 AMFRQ9UKV5 643 aa12.84□□□□□ -0.35
LINC00473-205ENST00000584911 LAMB1P07942 1786 aa12.84□□□□□ -0.35
LINC00473-205ENST00000584911 RIPK2O43353 540 aa12.84□□□□□ -0.35
LINC00473-205ENST00000584911 CCNT1O60563 726 aaKnown RBP12.84□□□□□ -0.35
LINC00473-205ENST00000584911 CAPN15O75808 1086 aa12.84□□□□□ -0.35
LINC00473-205ENST00000584911 H2AFZP0C0S5 128 aa12.84□□□□□ -0.35
LINC00473-205ENST00000584911 RAD23BP54727 409 aa12.84□□□□□ -0.35
LINC00473-205ENST00000584911 MAPK7Q13164 816 aa12.84□□□□□ -0.35
LINC00473-205ENST00000584911 LAMB3Q13751 1172 aa12.84□□□□□ -0.35
LINC00473-205ENST00000584911 GRM4Q14833 912 aa12.84□□□□□ -0.35
LINC00473-205ENST00000584911 DLGAP5Q15398 846 aa12.84□□□□□ -0.35
LINC00473-205ENST00000584911 ZNF568Q3ZCX4 644 aa12.84□□□□□ -0.35
LINC00473-205ENST00000584911 H2AFVQ71UI9 128 aa12.84□□□□□ -0.35
LINC00473-205ENST00000584911 KRT25Q7Z3Z0 450 aa12.84□□□□□ -0.35
LINC00473-205ENST00000584911 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.84□□□□□ -0.35
LINC00473-205ENST00000584911 PIGOQ8TEQ8 1089 aa12.84□□□□□ -0.35
LINC00473-205ENST00000584911 GLG1Q92896 1179 aa12.84□□□□□ -0.35
LINC00473-205ENST00000584911 DBR1Q9UK59 544 aaKnown RBP12.84□□□□□ -0.35
LINC00473-205ENST00000584911 USP17L12C9JPN9 530 aa12.83□□□□□ -0.36
LINC00473-205ENST00000584911 USP17L21D6R901 530 aa12.83□□□□□ -0.36
LINC00473-205ENST00000584911 PCK1P35558 622 aa12.83□□□□□ -0.36
LINC00473-205ENST00000584911 KLC1Q07866 573 aa12.83□□□□□ -0.36
LINC00473-205ENST00000584911 ORC2Q13416 577 aaPredicted RBP12.83□□□□□ -0.36
LINC00473-205ENST00000584911 LRRC14Q15048 493 aa12.83□□□□□ -0.36
LINC00473-205ENST00000584911 LETM2Q2VYF4 491 aa12.83□□□□□ -0.36
LINC00473-205ENST00000584911 OR52E8Q6IFG1 317 aa12.83□□□□□ -0.36
LINC00473-205ENST00000584911 MOB2Q70IA6 237 aa12.83□□□□□ -0.36
LINC00473-205ENST00000584911 FBXO33Q7Z6M2 555 aa12.83□□□□□ -0.36
LINC00473-205ENST00000584911 RASAL3Q86YV0 1011 aa12.83□□□□□ -0.36
LINC00473-205ENST00000584911 SH3TC2Q8TF17 1288 aa12.83□□□□□ -0.36
LINC00473-205ENST00000584911 DDX12PQ92771 950 aa12.83□□□□□ -0.36
LINC00473-205ENST00000584911 FAM136AQ96C01 138 aa12.83□□□□□ -0.36
LINC00473-205ENST00000584911 EPAS1Q99814 870 aa12.83□□□□□ -0.36
LINC00473-205ENST00000584911 GORASP1Q9BQQ3 440 aa12.83□□□□□ -0.36
LINC00473-205ENST00000584911 CARD9Q9H257 536 aa12.83□□□□□ -0.36
LINC00473-205ENST00000584911 ETNK1Q9HBU6 452 aa12.83□□□□□ -0.36
LINC00473-205ENST00000584911 JAG2Q9Y219 1238 aa12.83□□□□□ -0.36
LINC00473-205ENST00000584911 PCDHA3Q9Y5H8 950 aa12.83□□□□□ -0.36
LINC00473-205ENST00000584911 PCDHAC2Q9Y5I4 1007 aa12.83□□□□□ -0.36
LINC00473-205ENST00000584911 SPDYE2BA6NHP3 402 aa12.82□□□□□ -0.36
LINC00473-205ENST00000584911 CYTH3O43739 400 aa12.82□□□□□ -0.36
LINC00473-205ENST00000584911 SPDYE6P0CI01 402 aa12.82□□□□□ -0.36
LINC00473-205ENST00000584911 RARGP13631 454 aa12.82□□□□□ -0.36
LINC00473-205ENST00000584911 GM2AP17900 193 aa12.82□□□□□ -0.36
LINC00473-205ENST00000584911 SLCO1A2P46721 670 aa12.82□□□□□ -0.36
LINC00473-205ENST00000584911 PPATQ06203 517 aa12.82□□□□□ -0.36
LINC00473-205ENST00000584911 COASYQ13057 564 aa12.82□□□□□ -0.36
LINC00473-205ENST00000584911 MKRN3Q13064 507 aaKnown RBP12.82□□□□□ -0.36
LINC00473-205ENST00000584911 NONOQ15233 471 aaKnown RBP eCLIP12.82□□□□□ -0.36
LINC00473-205ENST00000584911 TMEM154Q6P9G4 183 aa12.82□□□□□ -0.36
LINC00473-205ENST00000584911 ECHDC2Q86YB7 292 aa12.82□□□□□ -0.36
LINC00473-205ENST00000584911 AGGF1Q8N302 714 aaeCLIP12.82□□□□□ -0.36
LINC00473-205ENST00000584911 DYDC1Q8WWB3 177 aa12.82□□□□□ -0.36
LINC00473-205ENST00000584911 DNAJC19Q96DA6 116 aa12.82□□□□□ -0.36
LINC00473-205ENST00000584911 BICD1Q96G01 975 aa12.82□□□□□ -0.36
LINC00473-205ENST00000584911 TMEM237Q96Q45 408 aa12.82□□□□□ -0.36
LINC00473-205ENST00000584911 MTMR9Q96QG7 549 aa12.82□□□□□ -0.36
LINC00473-205ENST00000584911 NAP1L3Q99457 506 aaPredicted RBP12.82□□□□□ -0.36
LINC00473-205ENST00000584911 KANSL2Q9H9L4 492 aa12.82□□□□□ -0.36
LINC00473-205ENST00000584911 TXLNGQ9NUQ3 528 aa12.82□□□□□ -0.36
LINC00473-205ENST00000584911 MAD2L2Q9UI95 211 aa12.82□□□□□ -0.36
LINC00473-205ENST00000584911 NCANO14594 1321 aa12.82□□□□□ -0.36
LINC00473-205ENST00000584911 TMEM120BA0PK00 339 aa12.82□□□□□ -0.36
LINC00473-205ENST00000584911 DDX3XO00571 662 aaKnown RBP eCLIP12.82□□□□□ -0.36
LINC00473-205ENST00000584911 ACTN1P12814 892 aa12.82□□□□□ -0.36
LINC00473-205ENST00000584911 UCHL3P15374 230 aa12.82□□□□□ -0.36
LINC00473-205ENST00000584911 COPB2P35606 906 aa12.82□□□□□ -0.36
LINC00473-205ENST00000584911 RPL21P46778 160 aaKnown RBP12.82□□□□□ -0.36
LINC00473-205ENST00000584911 FXR2P51116 673 aaKnown RBP eCLIP12.82□□□□□ -0.36
LINC00473-205ENST00000584911 TMEM119Q4V9L6 283 aa12.82□□□□□ -0.36
LINC00473-205ENST00000584911 IRGCQ6NXR0 463 aa12.82□□□□□ -0.36
LINC00473-205ENST00000584911 HEATR3Q7Z4Q2 680 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms