RNA–Protein interactions for RNA: ENST00000584155.1

NUP85-225, Transcript of nucleoporin 85, human

TSL 2

Gene NUP85, Length 300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-225	ENST00000584155	C17orf80	Q9BSJ5	609 aa		4.12	□□□□□ -1.75
NUP85-225	ENST00000584155	FTO	Q9C0B1	505 aa	Known RBP eCLIP	4.12	□□□□□ -1.75
NUP85-225	ENST00000584155	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	4.12	□□□□□ -1.75	3e-6	■■■■□ 25
NUP85-225	ENST00000584155	AP5M1	Q9H0R1	490 aa		4.12	□□□□□ -1.75
NUP85-225	ENST00000584155	TSPY26P	Q9H489	355 aa		4.12	□□□□□ -1.75
NUP85-225	ENST00000584155	JPH1	Q9HDC5	661 aa	Predicted RBP	4.12	□□□□□ -1.75
NUP85-225	ENST00000584155	RNF19A	Q9NV58	838 aa		4.12	□□□□□ -1.75
NUP85-225	ENST00000584155	COL20A1	Q9P218	1284 aa		4.12	□□□□□ -1.75
NUP85-225	ENST00000584155	SEPT3	Q9UH03	358 aa		4.12	□□□□□ -1.75
NUP85-225	ENST00000584155	GGT7	Q9UJ14	662 aa		4.12	□□□□□ -1.75
NUP85-225	ENST00000584155	STRIP2	Q9ULQ0	834 aa		4.12	□□□□□ -1.75
NUP85-225	ENST00000584155	PLAA	Q9Y263	795 aa		4.12	□□□□□ -1.75
NUP85-225	ENST00000584155	RBM19	Q9Y4C8	960 aa	Known RBP	4.12	□□□□□ -1.75
NUP85-225	ENST00000584155	SUPT16H	Q9Y5B9	1047 aa	Known RBP	4.12	□□□□□ -1.75
NUP85-225	ENST00000584155	TNKS	O95271	1327 aa		4.12	□□□□□ -1.75
NUP85-225	ENST00000584155	FRMPD2	Q68DX3	1309 aa	Predicted RBP	4.12	□□□□□ -1.75
NUP85-225	ENST00000584155	ROBO3	Q96MS0	1386 aa		4.12	□□□□□ -1.75
NUP85-225	ENST00000584155	ZNF236	Q9UL36	1845 aa		4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	ASB14	A6NK59	587 aa		4.11	□□□□□ -1.75
NUP85-225	ENST00000584155		H3BQ06	376 aa	Predicted RBP	4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	TTLL1	O95922	423 aa		4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	GOLGA8H	P0CJ92	632 aa		4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	PSMA3	P25788	255 aa		4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	CALML3	P27482	149 aa		4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	TSPAN7	P41732	249 aa		4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	NOV	P48745	357 aa		4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	ST13	P50502	369 aa	Known RBP	4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	ALDH5A1	P51649	535 aa	Predicted RBP	4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	WDR5	P61964	334 aa	Known RBP	4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	HNRNPU	Q00839	825 aa	Known RBP eCLIP	4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	SP2	Q02086	613 aa		4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	NUCB1	Q02818	461 aa		4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	DLX2	Q07687	328 aa	Predicted RBP	4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	PPARA	Q07869	468 aa		4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	MTMR3	Q13615	1198 aa		4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	TOMM20	Q15388	145 aa		4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	TCEA2	Q15560	299 aa		4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	ZKSCAN8	Q15776	578 aa	Predicted RBP	4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	TRIM71	Q2Q1W2	868 aa	Known RBP	4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	FAM47C	Q5HY64	1035 aa		4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	TMEM31	Q5JXX7	168 aa		4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	WDR45B	Q5MNZ6	344 aa		4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	NXN	Q6DKJ4	435 aa		4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	CCDC62	Q6P9F0	684 aa		4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	SLC30A10	Q6XR72	485 aa		4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	CCDC73	Q6ZRK6	1079 aa		4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	CHST3	Q7LGC8	479 aa		4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	RASSF3	Q86WH2	238 aa		4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	FBXO11	Q86XK2	927 aa		4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	DGKH	Q86XP1	1220 aa		4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	DDX42	Q86XP3	938 aa	Known RBP eCLIP	4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	ERC1	Q8IUD2	1116 aa		4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	FAM178B	Q8IXR5	827 aa		4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	DMRTC2	Q8IXT2	367 aa	Predicted RBP	4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	RPAP2	Q8IXW5	612 aa	Predicted RBP	4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	TCEAL8	Q8IYN2	117 aa		4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	LILRB2	Q8N423	598 aa		4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	DTWD1	Q8N5C7	304 aa		4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	ZNF513	Q8N8E2	541 aa	Predicted RBP	4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	KBTBD3	Q8NAB2	608 aa		4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	GMCL1P1	Q8NEA9	526 aa		4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	OR6J1	Q8NGC5	347 aa		4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	AFG1L	Q8WV93	481 aa		4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	ALKBH8	Q96BT7	664 aa	Known RBP	4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	PGBD4	Q96DM1	585 aa		4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	TRMT2B	Q96GJ1	504 aa	Known RBP	4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	CDK5RAP3	Q96JB5	506 aa		4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	FBXL18	Q96ME1	805 aa		4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	TMEM47	Q9BQJ4	181 aa		4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	ALG1	Q9BT22	464 aa		4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	CCDC113	Q9H0I3	377 aa		4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	ACAD9	Q9H845	621 aa		4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	RIC8A	Q9NPQ8	531 aa		4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	ZIM2	Q9NZV7	527 aa		4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	HDAC6	Q9UBN7	1215 aa		4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	TMCC3	Q9ULS5	477 aa		4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	R3HCC1	Q9Y3T6	440 aa	Known RBP	4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	TRIP12	Q14669	1992 aa	Predicted RBP	4.11	□□□□□ -1.75
NUP85-225	ENST00000584155	PTPDC1	A2A3K4	754 aa		4.1	□□□□□ -1.75
NUP85-225	ENST00000584155	LINC01553	A4QN01	128 aa		4.1	□□□□□ -1.75
NUP85-225	ENST00000584155	PRSS47	A8MTI9	375 aa		4.1	□□□□□ -1.75
NUP85-225	ENST00000584155	RRP9	O43818	475 aa	Known RBP	4.1	□□□□□ -1.75
NUP85-225	ENST00000584155	CABYR	O75952	493 aa		4.1	□□□□□ -1.75
NUP85-225	ENST00000584155	F2	P00734	622 aa		4.1	□□□□□ -1.75
NUP85-225	ENST00000584155	TPM2	P07951	284 aa		4.1	□□□□□ -1.75
NUP85-225	ENST00000584155	CTSH	P09668	335 aa		4.1	□□□□□ -1.75
NUP85-225	ENST00000584155	TSPY3	P0CV98	308 aa		4.1	□□□□□ -1.75
NUP85-225	ENST00000584155	TSPY8	P0CW00	308 aa		4.1	□□□□□ -1.75
NUP85-225	ENST00000584155	TXN	P10599	105 aa	Known RBP	4.1	□□□□□ -1.75
NUP85-225	ENST00000584155	CKB	P12277	381 aa		4.1	□□□□□ -1.75
NUP85-225	ENST00000584155	KCNA2	P16389	499 aa		4.1	□□□□□ -1.75
NUP85-225	ENST00000584155	KCNA5	P22460	613 aa		4.1	□□□□□ -1.75
NUP85-225	ENST00000584155	CASQ1	P31415	396 aa		4.1	□□□□□ -1.75
NUP85-225	ENST00000584155	LTBR	P36941	435 aa		4.1	□□□□□ -1.75
NUP85-225	ENST00000584155	TXLNA	P40222	546 aa		4.1	□□□□□ -1.75
NUP85-225	ENST00000584155	HAL	P42357	657 aa		4.1	□□□□□ -1.75
NUP85-225	ENST00000584155	SLC1A4	P43007	532 aa		4.1	□□□□□ -1.75
NUP85-225	ENST00000584155	MRE11	P49959	708 aa		4.1	□□□□□ -1.75
NUP85-225	ENST00000584155	RAB27A	P51159	221 aa		4.1	□□□□□ -1.75

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