RNA–Protein interactions for RNA: ENST00000582539.5

TRAPPC8-211, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 4,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-211ENST00000582539 RGS2P41220 211 aa10.91□□□□□ -0.66
TRAPPC8-211ENST00000582539 PPFIA1Q13136 1202 aa10.91□□□□□ -0.66
TRAPPC8-211ENST00000582539 ZFYVE27Q5T4F4 411 aa10.91□□□□□ -0.66
TRAPPC8-211ENST00000582539 WDR49Q8IV35 697 aa10.91□□□□□ -0.66
TRAPPC8-211ENST00000582539 MMGT1Q8N4V1 131 aa10.91□□□□□ -0.66
TRAPPC8-211ENST00000582539 NKX2-3Q8TAU0 364 aa10.91□□□□□ -0.66
TRAPPC8-211ENST00000582539 RSPH1Q8WYR4 309 aa10.91□□□□□ -0.66
TRAPPC8-211ENST00000582539 ANKRD7Q92527 254 aa10.91□□□□□ -0.66
TRAPPC8-211ENST00000582539 PORCNQ9H237 461 aa10.91□□□□□ -0.66
TRAPPC8-211ENST00000582539 SLC16A4O15374 487 aa10.91□□□□□ -0.66
TRAPPC8-211ENST00000582539 TLR3O15455 904 aaKnown RBP10.91□□□□□ -0.66
TRAPPC8-211ENST00000582539 AGPAT1Q99943 283 aa10.91□□□□□ -0.66
TRAPPC8-211ENST00000582539 SYNCQ9H7C4 482 aa10.91□□□□□ -0.66
TRAPPC8-211ENST00000582539 DMAC2Q9NW81 257 aa10.91□□□□□ -0.66
TRAPPC8-211ENST00000582539 PCDHB2Q9Y5E7 798 aa10.91□□□□□ -0.66
TRAPPC8-211ENST00000582539 OGTO15294 1046 aa10.9□□□□□ -0.66
TRAPPC8-211ENST00000582539 TADA3O75528 432 aa10.9□□□□□ -0.66
TRAPPC8-211ENST00000582539 TXNP10599 105 aaKnown RBP10.9□□□□□ -0.66
TRAPPC8-211ENST00000582539 MCF2P10911 925 aa10.9□□□□□ -0.66
TRAPPC8-211ENST00000582539 ACTN2P35609 894 aa10.9□□□□□ -0.66
TRAPPC8-211ENST00000582539 GPC3P51654 580 aa10.9□□□□□ -0.66
TRAPPC8-211ENST00000582539 DRAP1Q14919 205 aaPredicted RBP10.9□□□□□ -0.66
TRAPPC8-211ENST00000582539 PPM1KQ8N3J5 372 aa10.9□□□□□ -0.66
TRAPPC8-211ENST00000582539 TMEM35BQ8NCS4 154 aa10.9□□□□□ -0.66
TRAPPC8-211ENST00000582539 ZNF560Q96MR9 790 aa10.9□□□□□ -0.66
TRAPPC8-211ENST00000582539 DESI2Q9BSY9 194 aa10.9□□□□□ -0.66
TRAPPC8-211ENST00000582539 ABHD16BQ9H3Z7 469 aa10.9□□□□□ -0.66
TRAPPC8-211ENST00000582539 UBE2TQ9NPD8 197 aaPredicted RBP10.9□□□□□ -0.66
TRAPPC8-211ENST00000582539 SNX12Q9UMY4 172 aa10.9□□□□□ -0.66
TRAPPC8-211ENST00000582539 CCL15-CCL14A0A0B4J2E2 113 aa10.9□□□□□ -0.66
TRAPPC8-211ENST00000582539 CLIC2O15247 247 aa10.9□□□□□ -0.66
TRAPPC8-211ENST00000582539 TOM1L1O75674 476 aa10.9□□□□□ -0.66
TRAPPC8-211ENST00000582539 CLTAP09496 248 aa10.9□□□□□ -0.66
TRAPPC8-211ENST00000582539 PNPLA4P41247 253 aa10.9□□□□□ -0.66
TRAPPC8-211ENST00000582539 CALCOCO2Q13137 446 aa10.9□□□□□ -0.66
TRAPPC8-211ENST00000582539 CCL15Q16663 113 aa10.9□□□□□ -0.66
TRAPPC8-211ENST00000582539 DGKDQ16760 1214 aa10.9□□□□□ -0.66
TRAPPC8-211ENST00000582539 SLC30A10Q6XR72 485 aa10.9□□□□□ -0.66
TRAPPC8-211ENST00000582539 FAM133AQ8N9E0 248 aa10.9□□□□□ -0.66
TRAPPC8-211ENST00000582539 SHISA4Q96DD7 197 aa10.9□□□□□ -0.66
TRAPPC8-211ENST00000582539 DERAQ9Y315 318 aa10.9□□□□□ -0.66
TRAPPC8-211ENST00000582539 Q9Y3F1 56 aa10.9□□□□□ -0.66
TRAPPC8-211ENST00000582539 GOLGA8KD6RF30 607 aa10.9□□□□□ -0.67
TRAPPC8-211ENST00000582539 PPFIA4O75335 1185 aa10.9□□□□□ -0.67
TRAPPC8-211ENST00000582539 PRKCBP05771 671 aa10.9□□□□□ -0.67
TRAPPC8-211ENST00000582539 PON1P27169 355 aa10.9□□□□□ -0.67
TRAPPC8-211ENST00000582539 NMT1P30419 496 aaKnown RBP10.9□□□□□ -0.67
TRAPPC8-211ENST00000582539 MIIPQ5JXC2 388 aa10.9□□□□□ -0.67
TRAPPC8-211ENST00000582539 RAD9BQ6WBX8 426 aa10.9□□□□□ -0.67
TRAPPC8-211ENST00000582539 TTC13Q8NBP0 860 aa10.9□□□□□ -0.67
TRAPPC8-211ENST00000582539 ZKSCAN4Q969J2 545 aaPredicted RBP10.9□□□□□ -0.67
TRAPPC8-211ENST00000582539 DDX56Q9NY93 547 aaKnown RBP10.9□□□□□ -0.67
TRAPPC8-211ENST00000582539 PGAP2Q9UHJ9 254 aa10.9□□□□□ -0.67
TRAPPC8-211ENST00000582539 SNCAIPQ9Y6H5 919 aa10.9□□□□□ -0.67
TRAPPC8-211ENST00000582539 COL4A1P02462 1669 aa10.89□□□□□ -0.67
TRAPPC8-211ENST00000582539 NPTX2P47972 431 aa10.89□□□□□ -0.67
TRAPPC8-211ENST00000582539 DHX34Q14147 1143 aaKnown RBP10.89□□□□□ -0.67
TRAPPC8-211ENST00000582539 C11orf63Q6NUN7 778 aa10.89□□□□□ -0.67
TRAPPC8-211ENST00000582539 ABHD15Q6UXT9 468 aa10.89□□□□□ -0.67
TRAPPC8-211ENST00000582539 MICALCLQ6ZW33 695 aa10.89□□□□□ -0.67
TRAPPC8-211ENST00000582539 SLC35C1Q96A29 364 aa10.89□□□□□ -0.67
TRAPPC8-211ENST00000582539 ASB7Q9H672 318 aa10.89□□□□□ -0.67
TRAPPC8-211ENST00000582539 AVENQ9NQS1 362 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC8-211ENST00000582539 HAUS2Q9NVX0 235 aa10.89□□□□□ -0.67
TRAPPC8-211ENST00000582539 MAFO75444 373 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC8-211ENST00000582539 ITGB5P18084 799 aa10.89□□□□□ -0.67
TRAPPC8-211ENST00000582539 ERCC3P19447 782 aa10.89□□□□□ -0.67
TRAPPC8-211ENST00000582539 ERVK-9P63128 1117 aa10.89□□□□□ -0.67
TRAPPC8-211ENST00000582539 ERVK-24P63145 666 aa10.89□□□□□ -0.67
TRAPPC8-211ENST00000582539 EVX2Q03828 476 aa10.89□□□□□ -0.67
TRAPPC8-211ENST00000582539 ARID5AQ03989 594 aa10.89□□□□□ -0.67
TRAPPC8-211ENST00000582539 PRPF4BQ13523 1007 aaKnown RBP10.89□□□□□ -0.67
TRAPPC8-211ENST00000582539 TRIM65Q6PJ69 517 aa10.89□□□□□ -0.67
TRAPPC8-211ENST00000582539 ACRBPQ8NEB7 543 aa10.89□□□□□ -0.67
TRAPPC8-211ENST00000582539 HAUS1Q96CS2 278 aa10.89□□□□□ -0.67
TRAPPC8-211ENST00000582539 OPTNQ96CV9 577 aa10.89□□□□□ -0.67
TRAPPC8-211ENST00000582539 RBM41Q96IZ5 413 aaKnown RBP10.89□□□□□ -0.67
TRAPPC8-211ENST00000582539 TRIM6Q9C030 488 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC8-211ENST00000582539 PPCSQ9HAB8 311 aa10.89□□□□□ -0.67
TRAPPC8-211ENST00000582539 RAB20Q9NX57 234 aa10.89□□□□□ -0.67
TRAPPC8-211ENST00000582539 RBAKQ9NYW8 714 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC8-211ENST00000582539 ZNF214Q9UL59 606 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC8-211ENST00000582539 ZNF536O15090 1300 aa10.89□□□□□ -0.67
TRAPPC8-211ENST00000582539 CNGA1P29973 690 aa10.89□□□□□ -0.67
TRAPPC8-211ENST00000582539 EIF3BP55884 814 aaKnown RBP10.89□□□□□ -0.67
TRAPPC8-211ENST00000582539 CELF3Q5SZQ8 465 aaKnown RBP10.89□□□□□ -0.67
TRAPPC8-211ENST00000582539 B3GNT9Q6UX72 402 aa10.89□□□□□ -0.67
TRAPPC8-211ENST00000582539 DAAM2Q86T65 1068 aa10.89□□□□□ -0.67
TRAPPC8-211ENST00000582539 NME8Q8N427 588 aa10.89□□□□□ -0.67
TRAPPC8-211ENST00000582539 BEST2Q8NFU1 509 aa10.89□□□□□ -0.67
TRAPPC8-211ENST00000582539 FAM71BQ8TC56 605 aa10.89□□□□□ -0.67
TRAPPC8-211ENST00000582539 NFKBIZQ9BYH8 718 aa10.89□□□□□ -0.67
TRAPPC8-211ENST00000582539 HSD3B7Q9H2F3 369 aa10.89□□□□□ -0.67
TRAPPC8-211ENST00000582539 GTF3C4Q9UKN8 822 aa10.89□□□□□ -0.67
TRAPPC8-211ENST00000582539 MAFBQ9Y5Q3 323 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC8-211ENST00000582539 EML1O00423 815 aa10.88□□□□□ -0.67
TRAPPC8-211ENST00000582539 CD4P01730 458 aa10.88□□□□□ -0.67
TRAPPC8-211ENST00000582539 FAM163BP0C2L3 166 aa10.88□□□□□ -0.67
TRAPPC8-211ENST00000582539 TMEM132BQ14DG7 1078 aa10.88□□□□□ -0.67
TRAPPC8-211ENST00000582539 FAM110CQ1W6H9 321 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms