RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 OR9Q1Q8NGQ5 310 aa11.94□□□□□ -0.5
RPAP1-204ENST00000562303 PARD6BQ9BYG5 372 aa11.94□□□□□ -0.5
RPAP1-204ENST00000562303 ADAMTS12P58397 1594 aa11.93□□□□□ -0.5
RPAP1-204ENST00000562303 TRIM49BA6NDI0 452 aa11.93□□□□□ -0.5
RPAP1-204ENST00000562303 TADA2AO75478 443 aa11.93□□□□□ -0.5
RPAP1-204ENST00000562303 TXNP10599 105 aaKnown RBP11.93□□□□□ -0.5
RPAP1-204ENST00000562303 MEI1Q5TIA1 1274 aa11.93□□□□□ -0.5
RPAP1-204ENST00000562303 RESP18Q5W5W9 173 aa11.93□□□□□ -0.5
RPAP1-204ENST00000562303 OTULINQ96BN8 352 aa11.93□□□□□ -0.5
RPAP1-204ENST00000562303 KDM4CQ9H3R0 1056 aa11.93□□□□□ -0.5
RPAP1-204ENST00000562303 MRPL40Q9NQ50 206 aaKnown RBP11.93□□□□□ -0.5
RPAP1-204ENST00000562303 KIF28PB7ZC32 967 aa11.93□□□□□ -0.5
RPAP1-204ENST00000562303 GYG2O15488 501 aa11.93□□□□□ -0.5
RPAP1-204ENST00000562303 UPP2O95045 317 aa11.93□□□□□ -0.5
RPAP1-204ENST00000562303 CAV1Q03135 178 aa11.93□□□□□ -0.5
RPAP1-204ENST00000562303 TAF1CQ15572 869 aaPredicted RBP11.93□□□□□ -0.5
RPAP1-204ENST00000562303 FASTKD1Q53R41 847 aaKnown RBP11.93□□□□□ -0.5
RPAP1-204ENST00000562303 TNIP3Q96KP6 325 aa11.93□□□□□ -0.5
RPAP1-204ENST00000562303 DDX56Q9NY93 547 aaKnown RBP11.93□□□□□ -0.5
RPAP1-204ENST00000562303 POTEFA5A3E0 1075 aa11.93□□□□□ -0.5
RPAP1-204ENST00000562303 DIAPH2O60879 1101 aa11.93□□□□□ -0.5
RPAP1-204ENST00000562303 POTEIP0CG38 1075 aa11.93□□□□□ -0.5
RPAP1-204ENST00000562303 POTEGQ6S5H5 508 aa11.93□□□□□ -0.5
RPAP1-204ENST00000562303 POTEEQ6S8J3 1075 aa11.93□□□□□ -0.5
RPAP1-204ENST00000562303 KDELC2Q7Z4H8 507 aa11.93□□□□□ -0.5
RPAP1-204ENST00000562303 MFN1Q8IWA4 741 aa11.93□□□□□ -0.5
RPAP1-204ENST00000562303 ADGRF4Q8IZF3 695 aa11.93□□□□□ -0.5
RPAP1-204ENST00000562303 TMEM60Q9H2L4 133 aa11.93□□□□□ -0.5
RPAP1-204ENST00000562303 COL15A1P39059 1388 aa11.93□□□□□ -0.5
RPAP1-204ENST00000562303 LRRC53A6NM62 1247 aa11.93□□□□□ -0.5
RPAP1-204ENST00000562303 ASAP2O43150 1006 aa11.93□□□□□ -0.5
RPAP1-204ENST00000562303 HMGCS2P54868 508 aa11.93□□□□□ -0.5
RPAP1-204ENST00000562303 FAM47EQ6ZV65 393 aa11.93□□□□□ -0.5
RPAP1-204ENST00000562303 CCDC90BQ9GZT6 254 aa11.93□□□□□ -0.5
RPAP1-204ENST00000562303 PLEKHA5Q9HAU0 1116 aa11.93□□□□□ -0.5
RPAP1-204ENST00000562303 AGO2Q9UKV8 859 aaKnown RBP11.93□□□□□ -0.5
RPAP1-204ENST00000562303 BICRAQ9NZM4 1560 aa11.93□□□□□ -0.5
RPAP1-204ENST00000562303 ARHGAP10A1A4S6 786 aa11.93□□□□□ -0.5
RPAP1-204ENST00000562303 SPDYE5A6NIY4 337 aa11.93□□□□□ -0.5
RPAP1-204ENST00000562303 MYBL1P10243 752 aa11.93□□□□□ -0.5
RPAP1-204ENST00000562303 SSTR3P32745 418 aaPredicted RBP11.93□□□□□ -0.5
RPAP1-204ENST00000562303 QRICH1Q2TAL8 776 aa11.93□□□□□ -0.5
RPAP1-204ENST00000562303 SPDYE7PQ495Y7 208 aa11.93□□□□□ -0.5
RPAP1-204ENST00000562303 TEDDM1Q5T9Z0 273 aa11.93□□□□□ -0.5
RPAP1-204ENST00000562303 ADCK2Q7Z695 626 aa11.93□□□□□ -0.5
RPAP1-204ENST00000562303 TBC1D10CQ8IV04 446 aa11.93□□□□□ -0.5
RPAP1-204ENST00000562303 ACTR5Q9H9F9 607 aaPredicted RBP11.93□□□□□ -0.5
RPAP1-204ENST00000562303 ADA2Q9NZK5 511 aa11.93□□□□□ -0.5
RPAP1-204ENST00000562303 SELENONQ9NZV5 590 aa11.93□□□□□ -0.5
RPAP1-204ENST00000562303 PCDHB8Q9UN66 801 aa11.93□□□□□ -0.5
RPAP1-204ENST00000562303 LMNAP02545 664 aaKnown RBP11.92□□□□□ -0.5
RPAP1-204ENST00000562303 MMEP08473 750 aa11.92□□□□□ -0.5
RPAP1-204ENST00000562303 FDX1P10109 184 aa11.92□□□□□ -0.5
RPAP1-204ENST00000562303 MAP4P27816 1152 aaKnown RBP11.92□□□□□ -0.5
RPAP1-204ENST00000562303 CHRNA3P32297 505 aa11.92□□□□□ -0.5
RPAP1-204ENST00000562303 GFPT1Q06210 699 aaPredicted RBP11.92□□□□□ -0.5
RPAP1-204ENST00000562303 GPS1Q13098 491 aa11.92□□□□□ -0.5
RPAP1-204ENST00000562303 ZNF746Q6NUN9 644 aaPredicted RBP11.92□□□□□ -0.5
RPAP1-204ENST00000562303 HIBCHQ6NVY1 386 aaPredicted RBP11.92□□□□□ -0.5
RPAP1-204ENST00000562303 KCNV1Q6PIU1 500 aa11.92□□□□□ -0.5
RPAP1-204ENST00000562303 ST13P4Q8IZP2 240 aaPredicted RBP11.92□□□□□ -0.5
RPAP1-204ENST00000562303 WDR48Q8TAF3 677 aa11.92□□□□□ -0.5
RPAP1-204ENST00000562303 EFCAB6Q5THR3 1501 aa11.92□□□□□ -0.5
RPAP1-204ENST00000562303 CTSHP09668 335 aa11.92□□□□□ -0.5
RPAP1-204ENST00000562303 ZFXP17010 805 aaPredicted RBP11.92□□□□□ -0.5
RPAP1-204ENST00000562303 ADRA2BP18089 450 aa11.92□□□□□ -0.5
RPAP1-204ENST00000562303 HSD17B4P51659 736 aa11.92□□□□□ -0.5
RPAP1-204ENST00000562303 AP3M2P53677 418 aa11.92□□□□□ -0.5
RPAP1-204ENST00000562303 NR1H3Q13133 447 aa11.92□□□□□ -0.5
RPAP1-204ENST00000562303 DUOXA2Q1HG44 320 aa11.92□□□□□ -0.5
RPAP1-204ENST00000562303 PID1Q7Z2X4 250 aa11.92□□□□□ -0.5
RPAP1-204ENST00000562303 RNF149Q8NC42 400 aa11.92□□□□□ -0.5
RPAP1-204ENST00000562303 CFAP43Q8NDM7 1665 aa11.92□□□□□ -0.5
RPAP1-204ENST00000562303 ATP9BO43861 1147 aa11.92□□□□□ -0.5
RPAP1-204ENST00000562303 LARGE1O95461 756 aa11.92□□□□□ -0.5
RPAP1-204ENST00000562303 GRM4Q14833 912 aa11.92□□□□□ -0.5
RPAP1-204ENST00000562303 CELF1Q92879 486 aaKnown RBP11.92□□□□□ -0.5
RPAP1-204ENST00000562303 TSSK1BQ9BXA7 367 aa11.92□□□□□ -0.5
RPAP1-204ENST00000562303 DNMT1P26358 1616 aaKnown RBP11.92□□□□□ -0.5
RPAP1-204ENST00000562303 RNF103-CHMP3A0A140T963 221 aa11.92□□□□□ -0.5
RPAP1-204ENST00000562303 SULT1E1P49888 294 aa11.92□□□□□ -0.5
RPAP1-204ENST00000562303 TMED1Q13445 227 aa11.92□□□□□ -0.5
RPAP1-204ENST00000562303 DRAP1Q14919 205 aaPredicted RBP11.92□□□□□ -0.5
RPAP1-204ENST00000562303 TMED8Q6PL24 325 aaPredicted RBP11.92□□□□□ -0.5
RPAP1-204ENST00000562303 ASAP3Q8TDY4 903 aa11.92□□□□□ -0.5
RPAP1-204ENST00000562303 RUBCNLQ9H714 662 aa11.92□□□□□ -0.5
RPAP1-204ENST00000562303 USP6P35125 1406 aa11.91□□□□□ -0.5
RPAP1-204ENST00000562303 GUCY2CP25092 1073 aa11.91□□□□□ -0.5
RPAP1-204ENST00000562303 CDH6P55285 790 aa11.91□□□□□ -0.5
RPAP1-204ENST00000562303 POLE2P56282 527 aa11.91□□□□□ -0.5
RPAP1-204ENST00000562303 DAB2P98082 770 aa11.91□□□□□ -0.5
RPAP1-204ENST00000562303 PDIA2Q13087 525 aaKnown RBP11.91□□□□□ -0.5
RPAP1-204ENST00000562303 ZNF211Q13398 564 aaPredicted RBP11.91□□□□□ -0.5
RPAP1-204ENST00000562303 PDXDC1Q6P996 788 aa11.91□□□□□ -0.5
RPAP1-204ENST00000562303 PGBD4Q96DM1 585 aa11.91□□□□□ -0.5
RPAP1-204ENST00000562303 ZFP69BQ9UJL9 534 aa11.91□□□□□ -0.5
RPAP1-204ENST00000562303 RRP15Q9Y3B9 282 aaKnown RBP11.91□□□□□ -0.5
RPAP1-204ENST00000562303 PVALEFA0A1B0GWK0 134 aa11.91□□□□□ -0.5
RPAP1-204ENST00000562303 APOL1O14791 398 aa11.91□□□□□ -0.5
RPAP1-204ENST00000562303 OCA2Q04671 838 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms