RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 UNC13DQ70J99 1090 aa10.59□□□□□ -0.71
RABGGTA-221ENST00000561055 SFR1Q86XK3 245 aa10.59□□□□□ -0.71
RABGGTA-221ENST00000561055 ACO2Q99798 780 aaKnown RBP10.59□□□□□ -0.71
RABGGTA-221ENST00000561055 TBX20Q9UMR3 447 aa10.59□□□□□ -0.71
RABGGTA-221ENST00000561055 PCDHB7Q9Y5E2 793 aa10.59□□□□□ -0.71
RABGGTA-221ENST00000561055 ZMYM2Q9UBW7 1377 aa10.59□□□□□ -0.71
RABGGTA-221ENST00000561055 CHD9Q3L8U1 2897 aa10.58□□□□□ -0.72
RABGGTA-221ENST00000561055 SOX1O00570 391 aaPredicted RBP10.58□□□□□ -0.72
RABGGTA-221ENST00000561055 ABLIM1O14639 778 aa10.58□□□□□ -0.72
RABGGTA-221ENST00000561055 INPPL1O15357 1258 aa10.58□□□□□ -0.72
RABGGTA-221ENST00000561055 HOXA2O43364 376 aa10.58□□□□□ -0.72
RABGGTA-221ENST00000561055 TLL1O43897 1013 aa10.58□□□□□ -0.72
RABGGTA-221ENST00000561055 GADD45BO75293 160 aaPredicted RBP10.58□□□□□ -0.72
RABGGTA-221ENST00000561055 IDEP14735 1019 aa10.58□□□□□ -0.72
RABGGTA-221ENST00000561055 NMT1P30419 496 aaKnown RBP10.58□□□□□ -0.72
RABGGTA-221ENST00000561055 AFMP43652 599 aa10.58□□□□□ -0.72
RABGGTA-221ENST00000561055 DPYDQ12882 1025 aa10.58□□□□□ -0.72
RABGGTA-221ENST00000561055 STRN3Q13033 797 aa10.58□□□□□ -0.72
RABGGTA-221ENST00000561055 COASYQ13057 564 aa10.58□□□□□ -0.72
RABGGTA-221ENST00000561055 PSMD2Q13200 908 aa10.58□□□□□ -0.72
RABGGTA-221ENST00000561055 CUL4BQ13620 913 aa10.58□□□□□ -0.72
RABGGTA-221ENST00000561055 HERC4Q5GLZ8 1057 aaPredicted RBP10.58□□□□□ -0.72
RABGGTA-221ENST00000561055 MAP4K3Q8IVH8 894 aa10.58□□□□□ -0.72
RABGGTA-221ENST00000561055 CMTR2Q8IYT2 770 aaKnown RBP10.58□□□□□ -0.72
RABGGTA-221ENST00000561055 SMG8Q8ND04 991 aaKnown RBP10.58□□□□□ -0.72
RABGGTA-221ENST00000561055 PGBD4Q96DM1 585 aa10.58□□□□□ -0.72
RABGGTA-221ENST00000561055 CCDC34Q96HJ3 373 aa10.58□□□□□ -0.72
RABGGTA-221ENST00000561055 CPB2Q96IY4 423 aa10.58□□□□□ -0.72
RABGGTA-221ENST00000561055 GBP4Q96PP9 640 aa10.58□□□□□ -0.72
RABGGTA-221ENST00000561055 ZBED2Q9BTP6 218 aa10.58□□□□□ -0.72
RABGGTA-221ENST00000561055 MRPL4Q9BYD3 311 aaKnown RBP10.58□□□□□ -0.72
RABGGTA-221ENST00000561055 PDZD7Q9H5P4 517 aa10.58□□□□□ -0.72
RABGGTA-221ENST00000561055 UBN1Q9NPG3 1134 aa10.58□□□□□ -0.72
RABGGTA-221ENST00000561055 RNF19AQ9NV58 838 aa10.58□□□□□ -0.72
RABGGTA-221ENST00000561055 MSRAQ9UJ68 235 aa10.58□□□□□ -0.72
RABGGTA-221ENST00000561055 PCDHB2Q9Y5E7 798 aa10.58□□□□□ -0.72
RABGGTA-221ENST00000561055 PCDHB13Q9Y5F0 798 aa10.58□□□□□ -0.72
RABGGTA-221ENST00000561055 K7ENM7 598 aa10.57□□□□□ -0.72
RABGGTA-221ENST00000561055 EIF3DO15371 548 aaKnown RBP eCLIP10.57□□□□□ -0.72
RABGGTA-221ENST00000561055 NR1I2O75469 434 aa10.57□□□□□ -0.72
RABGGTA-221ENST00000561055 TOM1L1O75674 476 aa10.57□□□□□ -0.72
RABGGTA-221ENST00000561055 UPP2O95045 317 aa10.57□□□□□ -0.72
RABGGTA-221ENST00000561055 LIG1P18858 919 aa10.57□□□□□ -0.72
RABGGTA-221ENST00000561055 DNAJB2P25686 324 aa10.57□□□□□ -0.72
RABGGTA-221ENST00000561055 PBX2P40425 430 aa10.57□□□□□ -0.72
RABGGTA-221ENST00000561055 RABGGTBP53611 331 aa10.57□□□□□ -0.72
RABGGTA-221ENST00000561055 ASIC1P78348 528 aa10.57□□□□□ -0.72
RABGGTA-221ENST00000561055 ATF7IP2Q5U623 682 aa10.57□□□□□ -0.72
RABGGTA-221ENST00000561055 AGMOQ6ZNB7 445 aa10.57□□□□□ -0.72
RABGGTA-221ENST00000561055 EPM2AIP1Q7L775 607 aaPredicted RBP10.57□□□□□ -0.72
RABGGTA-221ENST00000561055 APBB1IPQ7Z5R6 666 aaPredicted RBP10.57□□□□□ -0.72
RABGGTA-221ENST00000561055 TMCO2Q7Z6W1 182 aaPredicted RBP10.57□□□□□ -0.72
RABGGTA-221ENST00000561055 SPATA20Q8TB22 786 aa10.57□□□□□ -0.72
RABGGTA-221ENST00000561055 ZNF507Q8TCN5 953 aa10.57□□□□□ -0.72
RABGGTA-221ENST00000561055 CLP1Q92989 425 aaKnown RBP10.57□□□□□ -0.72
RABGGTA-221ENST00000561055 TIFAQ96CG3 184 aa10.57□□□□□ -0.72
RABGGTA-221ENST00000561055 ADPGKQ9BRR6 497 aa10.57□□□□□ -0.72
RABGGTA-221ENST00000561055 EIF2AQ9BY44 585 aaKnown RBP10.57□□□□□ -0.72
RABGGTA-221ENST00000561055 TMEM117Q9H0C3 514 aa10.57□□□□□ -0.72
RABGGTA-221ENST00000561055 BLZF1Q9H2G9 400 aa10.57□□□□□ -0.72
RABGGTA-221ENST00000561055 ZHX3Q9H4I2 956 aa10.57□□□□□ -0.72
RABGGTA-221ENST00000561055 MRPL44Q9H9J2 332 aaKnown RBP10.57□□□□□ -0.72
RABGGTA-221ENST00000561055 LRFN2Q9ULH4 789 aa10.57□□□□□ -0.72
RABGGTA-221ENST00000561055 YBX2Q9Y2T7 364 aaKnown RBP10.57□□□□□ -0.72
RABGGTA-221ENST00000561055 IPPQ9Y573 584 aa10.57□□□□□ -0.72
RABGGTA-221ENST00000561055 STYXL1Q9Y6J8 313 aa10.57□□□□□ -0.72
RABGGTA-221ENST00000561055 CHD7Q9P2D1 2997 aa10.57□□□□□ -0.72
RABGGTA-221ENST00000561055 TRANK1O15050 2925 aa10.57□□□□□ -0.72
RABGGTA-221ENST00000561055 COL6A3P12111 3177 aa10.57□□□□□ -0.72
RABGGTA-221ENST00000561055 PRPF40AO75400 957 aaKnown RBP10.56□□□□□ -0.72
RABGGTA-221ENST00000561055 OFD1O75665 1012 aa10.56□□□□□ -0.72
RABGGTA-221ENST00000561055 RHOBTB3O94955 611 aa10.56□□□□□ -0.72
RABGGTA-221ENST00000561055 LINC00271P0C7V0 271 aa10.56□□□□□ -0.72
RABGGTA-221ENST00000561055 MCF2P10911 925 aa10.56□□□□□ -0.72
RABGGTA-221ENST00000561055 CASP1P29466 404 aa10.56□□□□□ -0.72
RABGGTA-221ENST00000561055 CASP5P51878 434 aa10.56□□□□□ -0.72
RABGGTA-221ENST00000561055 MCL1Q07820 350 aa10.56□□□□□ -0.72
RABGGTA-221ENST00000561055 KCNB1Q14721 858 aa10.56□□□□□ -0.72
RABGGTA-221ENST00000561055 DCAF4L1Q3SXM0 396 aa10.56□□□□□ -0.72
RABGGTA-221ENST00000561055 ZC2HC1CQ53FD0 456 aaPredicted RBP10.56□□□□□ -0.72
RABGGTA-221ENST00000561055 CLLU1OSQ5K130 101 aa10.56□□□□□ -0.72
RABGGTA-221ENST00000561055 FAM26FQ5R3K3 315 aa10.56□□□□□ -0.72
RABGGTA-221ENST00000561055 L1TD1Q5T7N2 865 aaKnown RBP10.56□□□□□ -0.72
RABGGTA-221ENST00000561055 EEF1DP3Q658K8 133 aa10.56□□□□□ -0.72
RABGGTA-221ENST00000561055 MPZL3Q6UWV2 235 aa10.56□□□□□ -0.72
RABGGTA-221ENST00000561055 STXBP4Q6ZWJ1 553 aa10.56□□□□□ -0.72
RABGGTA-221ENST00000561055 GRAMD1CQ8IYS0 662 aa10.56□□□□□ -0.72
RABGGTA-221ENST00000561055 HACE1Q8IYU2 909 aa10.56□□□□□ -0.72
RABGGTA-221ENST00000561055 CASD1Q96PB1 797 aa10.56□□□□□ -0.72
RABGGTA-221ENST00000561055 YME1L1Q96TA2 773 aa10.56□□□□□ -0.72
RABGGTA-221ENST00000561055 TARS2Q9BW92 718 aaKnown RBP10.56□□□□□ -0.72
RABGGTA-221ENST00000561055 LMBRD1Q9NUN5 540 aa10.56□□□□□ -0.72
RABGGTA-221ENST00000561055 EXOC7Q9UPT5 735 aa10.56□□□□□ -0.72
RABGGTA-221ENST00000561055 GIT1Q9Y2X7 761 aa10.56□□□□□ -0.72
RABGGTA-221ENST00000561055 COL4A4P53420 1690 aaPredicted RBP10.56□□□□□ -0.72
RABGGTA-221ENST00000561055 UBE4BO95155 1302 aa10.56□□□□□ -0.72
RABGGTA-221ENST00000561055 LCHNA4D1U4 455 aa10.55□□□□□ -0.72
RABGGTA-221ENST00000561055 LINC01553A4QN01 128 aa10.55□□□□□ -0.72
RABGGTA-221ENST00000561055 CLDN3O15551 220 aa10.55□□□□□ -0.72
RABGGTA-221ENST00000561055 GCNT3O95395 438 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms