RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 ADCK5Q3MIX3 580 aa18.62■□□□□ 0.57
HERC1-207ENST00000560316 PLA2G4FQ68DD2 849 aa18.62■□□□□ 0.57
HERC1-207ENST00000560316 GLYCTKQ8IVS8 523 aa18.62■□□□□ 0.57
HERC1-207ENST00000560316 MINDY3Q9H8M7 445 aa18.62■□□□□ 0.57
HERC1-207ENST00000560316 NCDNQ9UBB6 729 aa18.62■□□□□ 0.57
HERC1-207ENST00000560316 CNTNAP2Q9UHC6 1331 aa18.62■□□□□ 0.57
HERC1-207ENST00000560316 COL4A3Q01955 1670 aa18.62■□□□□ 0.57
HERC1-207ENST00000560316 TGM5O43548 720 aa18.61■□□□□ 0.57
HERC1-207ENST00000560316 GAS2O43903 313 aaKnown RBP18.61■□□□□ 0.57
HERC1-207ENST00000560316 EFEMP2O95967 443 aa18.61■□□□□ 0.57
HERC1-207ENST00000560316 HOXA11P31270 313 aaPredicted RBP18.61■□□□□ 0.57
HERC1-207ENST00000560316 GPC5P78333 572 aa18.61■□□□□ 0.57
HERC1-207ENST00000560316 DSG1Q02413 1049 aa18.61■□□□□ 0.57
HERC1-207ENST00000560316 SNW1Q13573 536 aaKnown RBP18.61■□□□□ 0.57
HERC1-207ENST00000560316 VARS2Q5ST30 1063 aaKnown RBP18.61■□□□□ 0.57
HERC1-207ENST00000560316 SMG8Q8ND04 991 aaKnown RBP18.61■□□□□ 0.57
HERC1-207ENST00000560316 RDM1Q8NG50 284 aa18.61■□□□□ 0.57
HERC1-207ENST00000560316 PHKBQ93100 1093 aa18.61■□□□□ 0.57
HERC1-207ENST00000560316 SPATA6Q9NWH7 488 aaPredicted RBP18.61■□□□□ 0.57
HERC1-207ENST00000560316 COL4A3BPQ9Y5P4 624 aa18.61■□□□□ 0.57
HERC1-207ENST00000560316 ACACBO00763 2458 aa18.6■□□□□ 0.57
HERC1-207ENST00000560316 PAPLNO95428 1278 aa18.6■□□□□ 0.57
HERC1-207ENST00000560316 SRGAP2CP0DJJ0 459 aa18.6■□□□□ 0.57
HERC1-207ENST00000560316 NCLP19338 710 aaKnown RBP18.6■□□□□ 0.57
HERC1-207ENST00000560316 ATXN1P54253 815 aaKnown RBP18.6■□□□□ 0.57
HERC1-207ENST00000560316 RNF20Q5VTR2 975 aa18.6■□□□□ 0.57
HERC1-207ENST00000560316 PARM1Q6UWI2 310 aa18.6■□□□□ 0.57
HERC1-207ENST00000560316 ANO5Q75V66 913 aa18.6■□□□□ 0.57
HERC1-207ENST00000560316 BICD2Q8TD16 824 aa18.6■□□□□ 0.57
HERC1-207ENST00000560316 HDAC7Q8WUI4 952 aa18.6■□□□□ 0.57
HERC1-207ENST00000560316 FGF14Q92915 247 aa18.6■□□□□ 0.57
HERC1-207ENST00000560316 PRKD2Q9BZL6 878 aa18.6■□□□□ 0.57
HERC1-207ENST00000560316 PLEKHA4Q9H4M7 779 aa18.6■□□□□ 0.57
HERC1-207ENST00000560316 MIOSQ9NXC5 875 aa18.6■□□□□ 0.57
HERC1-207ENST00000560316 ZDHHC7Q9NXF8 308 aa18.6■□□□□ 0.57
HERC1-207ENST00000560316 MTF2Q9Y483 593 aaPredicted RBP18.6■□□□□ 0.57
HERC1-207ENST00000560316 PRPF3O43395 683 aaKnown RBP18.59■□□□□ 0.57
HERC1-207ENST00000560316 ITGA4P13612 1032 aa18.59■□□□□ 0.57
HERC1-207ENST00000560316 RPL17P18621 184 aaKnown RBP18.59■□□□□ 0.57
HERC1-207ENST00000560316 USP11P51784 963 aa18.59■□□□□ 0.57
HERC1-207ENST00000560316 RCAN1P53805 252 aa18.59■□□□□ 0.57
HERC1-207ENST00000560316 CSTF1Q05048 431 aaKnown RBP18.59■□□□□ 0.57
HERC1-207ENST00000560316 B3GNT9Q6UX72 402 aa18.59■□□□□ 0.57
HERC1-207ENST00000560316 RASEFQ8IZ41 740 aa18.59■□□□□ 0.57
HERC1-207ENST00000560316 SHDQ96IW2 340 aa18.59■□□□□ 0.57
HERC1-207ENST00000560316 GAD1Q99259 594 aa18.59■□□□□ 0.57
HERC1-207ENST00000560316 CHST7Q9NS84 486 aa18.59■□□□□ 0.57
HERC1-207ENST00000560316 DOCK6Q96HP0 2047 aa18.58■□□□□ 0.56
HERC1-207ENST00000560316 CCDC196A0A1B0GTZ2 297 aa18.58■□□□□ 0.56
HERC1-207ENST00000560316 KANSL1LA0AUZ9 987 aa18.58■□□□□ 0.56
HERC1-207ENST00000560316 ARL5CA6NH57 179 aa18.58■□□□□ 0.56
HERC1-207ENST00000560316 LAMTOR5O43504 91 aa18.58■□□□□ 0.56
HERC1-207ENST00000560316 FSHRP23945 695 aa18.58■□□□□ 0.56
HERC1-207ENST00000560316 MLH1P40692 756 aa18.58■□□□□ 0.56
HERC1-207ENST00000560316 SCNN1GP51170 649 aa18.58■□□□□ 0.56
HERC1-207ENST00000560316 NPEPPSP55786 919 aa18.58■□□□□ 0.56
HERC1-207ENST00000560316 DSC1Q08554 894 aa18.58■□□□□ 0.56
HERC1-207ENST00000560316 UBXN2BQ14CS0 331 aa18.58■□□□□ 0.56
HERC1-207ENST00000560316 ZNF528Q3MIS6 628 aa18.58■□□□□ 0.56
HERC1-207ENST00000560316 LILRA6Q6PI73 481 aa18.58■□□□□ 0.56
HERC1-207ENST00000560316 SRGAP1Q7Z6B7 1085 aa18.58■□□□□ 0.56
HERC1-207ENST00000560316 ZNF579Q8NAF0 562 aaKnown RBP18.58■□□□□ 0.56
HERC1-207ENST00000560316 PRPF31Q8WWY3 499 aaKnown RBP18.58■□□□□ 0.56
HERC1-207ENST00000560316 TMEM143Q96AN5 459 aa18.58■□□□□ 0.56
HERC1-207ENST00000560316 ZFP42Q96MM3 310 aa18.58■□□□□ 0.56
HERC1-207ENST00000560316 JPH2Q9BR39 696 aaPredicted RBP18.58■□□□□ 0.56
HERC1-207ENST00000560316 EIF2AQ9BY44 585 aaKnown RBP18.58■□□□□ 0.56
HERC1-207ENST00000560316 BCO2Q9BYV7 579 aa18.58■□□□□ 0.56
HERC1-207ENST00000560316 GPR62Q9BZJ7 368 aa18.58■□□□□ 0.56
HERC1-207ENST00000560316 VPS54Q9P1Q0 977 aa18.58■□□□□ 0.56
HERC1-207ENST00000560316 HES2Q9Y543 173 aa18.58■□□□□ 0.56
HERC1-207ENST00000560316 IPPQ9Y573 584 aa18.58■□□□□ 0.56
HERC1-207ENST00000560316 MIA3Q5JRA6 1907 aa18.57■□□□□ 0.56
HERC1-207ENST00000560316 MTCL1Q9Y4B5 1905 aaKnown RBP18.57■□□□□ 0.56
HERC1-207ENST00000560316 SPTLC1O15269 473 aa18.57■□□□□ 0.56
HERC1-207ENST00000560316 TDP2O95551 362 aa18.57■□□□□ 0.56
HERC1-207ENST00000560316 NTHL1P78549 312 aa18.57■□□□□ 0.56
HERC1-207ENST00000560316 MLF2Q15773 248 aaPredicted RBP18.57■□□□□ 0.56
HERC1-207ENST00000560316 Q4G0T1 1027 aa18.57■□□□□ 0.56
HERC1-207ENST00000560316 GRASPQ7Z6J2 395 aaPredicted RBP18.57■□□□□ 0.56
HERC1-207ENST00000560316 TBCKQ8TEA7 893 aa18.57■□□□□ 0.56
HERC1-207ENST00000560316 ATRIPQ8WXE1 791 aa18.57■□□□□ 0.56
HERC1-207ENST00000560316 DDX23Q9BUQ8 820 aaKnown RBP18.57■□□□□ 0.56
HERC1-207ENST00000560316 UBN1Q9NPG3 1134 aa18.57■□□□□ 0.56
HERC1-207ENST00000560316 BMP2KQ9NSY1 1161 aaPredicted RBP18.57■□□□□ 0.56
HERC1-207ENST00000560316 FBXO4Q9UKT5 387 aa18.57■□□□□ 0.56
HERC1-207ENST00000560316 FAM170BA6NMN3 283 aa18.56■□□□□ 0.56
HERC1-207ENST00000560316 ZMYND10O75800 440 aa18.56■□□□□ 0.56
HERC1-207ENST00000560316 CPA1P15085 419 aa18.56■□□□□ 0.56
HERC1-207ENST00000560316 CD72P21854 359 aa18.56■□□□□ 0.56
HERC1-207ENST00000560316 PSMC5P62195 406 aa18.56■□□□□ 0.56
HERC1-207ENST00000560316 FGD1P98174 961 aa18.56■□□□□ 0.56
HERC1-207ENST00000560316 AKAP17AQ02040 695 aaKnown RBP18.56■□□□□ 0.56
HERC1-207ENST00000560316 LAMTOR4Q0VGL1 99 aa18.56■□□□□ 0.56
HERC1-207ENST00000560316 SLC44A4Q53GD3 710 aa18.56■□□□□ 0.56
HERC1-207ENST00000560316 FUT10Q6P4F1 479 aa18.56■□□□□ 0.56
HERC1-207ENST00000560316 CNNM3Q8NE01 707 aa18.56■□□□□ 0.56
HERC1-207ENST00000560316 CCDC148Q8NFR7 591 aa18.56■□□□□ 0.56
HERC1-207ENST00000560316 SLC7A3Q8WY07 619 aa18.56■□□□□ 0.56
HERC1-207ENST00000560316 RABGGTAQ92696 567 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms