RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 RPL17P18621 184 aaKnown RBP12.09□□□□□ -0.47
TRAF3-207ENST00000559734 CD72P21854 359 aa12.09□□□□□ -0.47
TRAF3-207ENST00000559734 CDC27P30260 824 aa12.09□□□□□ -0.47
TRAF3-207ENST00000559734 NTHL1P78549 312 aa12.09□□□□□ -0.47
TRAF3-207ENST00000559734 ARHGAP8P85298 464 aa12.09□□□□□ -0.47
TRAF3-207ENST00000559734 PFKFB3Q16875 520 aaPredicted RBP12.09□□□□□ -0.47
TRAF3-207ENST00000559734 ZNF528Q3MIS6 628 aa12.09□□□□□ -0.47
TRAF3-207ENST00000559734 XKR3Q5GH77 459 aa12.09□□□□□ -0.47
TRAF3-207ENST00000559734 PLA2G4FQ68DD2 849 aa12.09□□□□□ -0.47
TRAF3-207ENST00000559734 PARM1Q6UWI2 310 aa12.09□□□□□ -0.47
TRAF3-207ENST00000559734 GRASPQ7Z6J2 395 aaPredicted RBP12.09□□□□□ -0.47
TRAF3-207ENST00000559734 COLGALT2Q8IYK4 626 aa12.09□□□□□ -0.47
TRAF3-207ENST00000559734 LENG9Q96B70 501 aa12.09□□□□□ -0.47
TRAF3-207ENST00000559734 RTKNQ9BST9 563 aa12.09□□□□□ -0.47
TRAF3-207ENST00000559734 APOL6Q9BWW8 343 aa12.09□□□□□ -0.47
TRAF3-207ENST00000559734 PRKD2Q9BZL6 878 aa12.09□□□□□ -0.47
TRAF3-207ENST00000559734 LSG1Q9H089 658 aaKnown RBP12.09□□□□□ -0.47
TRAF3-207ENST00000559734 PLEKHA4Q9H4M7 779 aa12.09□□□□□ -0.47
TRAF3-207ENST00000559734 RXFP1Q9HBX9 757 aa12.09□□□□□ -0.47
TRAF3-207ENST00000559734 BMP2KQ9NSY1 1161 aaPredicted RBP12.09□□□□□ -0.47
TRAF3-207ENST00000559734 ZDHHC7Q9NXF8 308 aa12.09□□□□□ -0.47
TRAF3-207ENST00000559734 GMEB2Q9UKD1 530 aa12.09□□□□□ -0.47
TRAF3-207ENST00000559734 POLIQ9UNA4 740 aa12.09□□□□□ -0.47
TRAF3-207ENST00000559734 PCDHGA2Q9Y5H1 932 aa12.09□□□□□ -0.47
TRAF3-207ENST00000559734 ZNF292O60281 2723 aa12.09□□□□□ -0.47
TRAF3-207ENST00000559734 IGKV6-21A0A0C4DH24 114 aa12.08□□□□□ -0.48
TRAF3-207ENST00000559734 NR1I2O75469 434 aa12.08□□□□□ -0.48
TRAF3-207ENST00000559734 SRGAP2CP0DJJ0 459 aa12.08□□□□□ -0.48
TRAF3-207ENST00000559734 CIITAP33076 1130 aa12.08□□□□□ -0.48
TRAF3-207ENST00000559734 MLH1P40692 756 aa12.08□□□□□ -0.48
TRAF3-207ENST00000559734 SCNN1GP51170 649 aa12.08□□□□□ -0.48
TRAF3-207ENST00000559734 DSG1Q02413 1049 aa12.08□□□□□ -0.48
TRAF3-207ENST00000559734 LPAL2Q16609 132 aa12.08□□□□□ -0.48
TRAF3-207ENST00000559734 SLC44A4Q53GD3 710 aa12.08□□□□□ -0.48
TRAF3-207ENST00000559734 MRPL10Q7Z7H8 261 aaKnown RBP12.08□□□□□ -0.48
TRAF3-207ENST00000559734 CCDC12Q8WUD4 166 aaPredicted RBP12.08□□□□□ -0.48
TRAF3-207ENST00000559734 HDAC7Q8WUI4 952 aa12.08□□□□□ -0.48
TRAF3-207ENST00000559734 GAD1Q99259 594 aa12.08□□□□□ -0.48
TRAF3-207ENST00000559734 RIT2Q99578 217 aa12.08□□□□□ -0.48
TRAF3-207ENST00000559734 NIFKQ9BYG3 293 aaKnown RBP12.08□□□□□ -0.48
TRAF3-207ENST00000559734 ZMYND12Q9H0C1 365 aa12.08□□□□□ -0.48
TRAF3-207ENST00000559734 ANO2Q9NQ90 1003 aa12.08□□□□□ -0.48
TRAF3-207ENST00000559734 ZSCAN32Q9NX65 697 aa12.08□□□□□ -0.48
TRAF3-207ENST00000559734 CDH7Q9ULB5 785 aa12.08□□□□□ -0.48
TRAF3-207ENST00000559734 COL4A3BPQ9Y5P4 624 aa12.08□□□□□ -0.48
TRAF3-207ENST00000559734 CEP250Q9BV73 2442 aa12.08□□□□□ -0.48
TRAF3-207ENST00000559734 FANCMQ8IYD8 2048 aa12.08□□□□□ -0.48
TRAF3-207ENST00000559734 ESYT2A0FGR8 921 aa12.07□□□□□ -0.48
TRAF3-207ENST00000559734 MAFO75444 373 aaPredicted RBP12.07□□□□□ -0.48
TRAF3-207ENST00000559734 NCLP19338 710 aaKnown RBP12.07□□□□□ -0.48
TRAF3-207ENST00000559734 GNA11P29992 359 aa12.07□□□□□ -0.48
TRAF3-207ENST00000559734 FGD1P98174 961 aa12.07□□□□□ -0.48
TRAF3-207ENST00000559734 PRKCQQ04759 706 aa12.07□□□□□ -0.48
TRAF3-207ENST00000559734 UBXN11Q5T124 520 aa12.07□□□□□ -0.48
TRAF3-207ENST00000559734 FUT10Q6P4F1 479 aa12.07□□□□□ -0.48
TRAF3-207ENST00000559734 TPRG1Q6ZUI0 275 aa12.07□□□□□ -0.48
TRAF3-207ENST00000559734 MTSS1LQ765P7 747 aa12.07□□□□□ -0.48
TRAF3-207ENST00000559734 RABGGTAQ92696 567 aa12.07□□□□□ -0.48
TRAF3-207ENST00000559734 SLC5A5Q92911 643 aa12.07□□□□□ -0.48
TRAF3-207ENST00000559734 ZFP42Q96MM3 310 aa12.07□□□□□ -0.48
TRAF3-207ENST00000559734 CEP89Q96ST8 783 aa12.07□□□□□ -0.48
TRAF3-207ENST00000559734 KXD1Q9BQD3 176 aa12.07□□□□□ -0.48
TRAF3-207ENST00000559734 COLEC11Q9BWP8 271 aa12.07□□□□□ -0.48
TRAF3-207ENST00000559734 IFT122Q9HBG6 1241 aa12.07□□□□□ -0.48
TRAF3-207ENST00000559734 LTB4R2Q9NPC1 389 aa12.07□□□□□ -0.48
TRAF3-207ENST00000559734 FAM217BQ9NTX9 383 aaPredicted RBP12.07□□□□□ -0.48
TRAF3-207ENST00000559734 IPPQ9Y573 584 aa12.07□□□□□ -0.48
TRAF3-207ENST00000559734 MIA3Q5JRA6 1907 aa12.06□□□□□ -0.48
TRAF3-207ENST00000559734 ARL5CA6NH57 179 aa12.06□□□□□ -0.48
TRAF3-207ENST00000559734 CCL16O15467 120 aa12.06□□□□□ -0.48
TRAF3-207ENST00000559734 ZMYND10O75800 440 aa12.06□□□□□ -0.48
TRAF3-207ENST00000559734 ERLIN2O94905 339 aa12.06□□□□□ -0.48
TRAF3-207ENST00000559734 STBD1O95210 358 aa12.06□□□□□ -0.48
TRAF3-207ENST00000559734 ADRB1P08588 477 aa12.06□□□□□ -0.48
TRAF3-207ENST00000559734 TARSP26639 723 aaKnown RBP12.06□□□□□ -0.48
TRAF3-207ENST00000559734 ADD1P35611 737 aaKnown RBP12.06□□□□□ -0.48
TRAF3-207ENST00000559734 AKAP17AQ02040 695 aaKnown RBP12.06□□□□□ -0.48
TRAF3-207ENST00000559734 PPM1JQ5JR12 505 aa12.06□□□□□ -0.48
TRAF3-207ENST00000559734 PPM1LQ5SGD2 360 aa12.06□□□□□ -0.48
TRAF3-207ENST00000559734 ZBTB41Q5SVQ8 909 aa12.06□□□□□ -0.48
TRAF3-207ENST00000559734 LIN9Q5TKA1 542 aa12.06□□□□□ -0.48
TRAF3-207ENST00000559734 PRSS55Q6UWB4 352 aaPredicted RBP12.06□□□□□ -0.48
TRAF3-207ENST00000559734 SRGAP1Q7Z6B7 1085 aa12.06□□□□□ -0.48
TRAF3-207ENST00000559734 RNF168Q8IYW5 571 aaPredicted RBP12.06□□□□□ -0.48
TRAF3-207ENST00000559734 SMG8Q8ND04 991 aaKnown RBP12.06□□□□□ -0.48
TRAF3-207ENST00000559734 BICD2Q8TD16 824 aa12.06□□□□□ -0.48
TRAF3-207ENST00000559734 TMEM143Q96AN5 459 aa12.06□□□□□ -0.48
TRAF3-207ENST00000559734 JPH2Q9BR39 696 aaPredicted RBP12.06□□□□□ -0.48
TRAF3-207ENST00000559734 PHF20Q9BVI0 1012 aa12.06□□□□□ -0.48
TRAF3-207ENST00000559734 EIF2AQ9BY44 585 aaKnown RBP12.06□□□□□ -0.48
TRAF3-207ENST00000559734 GPR62Q9BZJ7 368 aa12.06□□□□□ -0.48
TRAF3-207ENST00000559734 EPC1Q9H2F5 836 aa12.06□□□□□ -0.48
TRAF3-207ENST00000559734 MINDY3Q9H8M7 445 aa12.06□□□□□ -0.48
TRAF3-207ENST00000559734 PARD6AQ9NPB6 346 aa12.06□□□□□ -0.48
TRAF3-207ENST00000559734 UBN1Q9NPG3 1134 aa12.06□□□□□ -0.48
TRAF3-207ENST00000559734 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.06□□□□□ -0.48
TRAF3-207ENST00000559734 RAB23Q9ULC3 237 aa12.06□□□□□ -0.48
TRAF3-207ENST00000559734 HES2Q9Y543 173 aa12.06□□□□□ -0.48
TRAF3-207ENST00000559734 ZFP37Q9Y6Q3 630 aaPredicted RBP12.06□□□□□ -0.48
TRAF3-207ENST00000559734 GPR179Q6PRD1 2367 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms