RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 CCNE2O96020 404 aa10.92□□□□□ -0.66
SMAD3-211ENST00000559460 CCDC192P0DO97 292 aa10.92□□□□□ -0.66
SMAD3-211ENST00000559460 FZD5Q13467 585 aa10.92□□□□□ -0.66
SMAD3-211ENST00000559460 USP41Q3LFD5 358 aa10.92□□□□□ -0.66
SMAD3-211ENST00000559460 TAS1R1Q7RTX1 841 aa10.92□□□□□ -0.66
SMAD3-211ENST00000559460 SPEM1Q8N4L4 309 aa10.92□□□□□ -0.66
SMAD3-211ENST00000559460 ING5Q8WYH8 240 aa10.92□□□□□ -0.66
SMAD3-211ENST00000559460 GATA6Q92908 595 aa10.92□□□□□ -0.66
SMAD3-211ENST00000559460 LZTS2Q9BRK4 669 aa10.92□□□□□ -0.66
SMAD3-211ENST00000559460 EDEM2Q9BV94 578 aa10.92□□□□□ -0.66
SMAD3-211ENST00000559460 NRBP2Q9NSY0 501 aa10.92□□□□□ -0.66
SMAD3-211ENST00000559460 FNIP2Q9P278 1114 aa10.92□□□□□ -0.66
SMAD3-211ENST00000559460 RALGAPA1Q6GYQ0 2036 aa10.92□□□□□ -0.66
SMAD3-211ENST00000559460 EVPLQ92817 2033 aa10.91□□□□□ -0.66
SMAD3-211ENST00000559460 CCL16O15467 120 aa10.91□□□□□ -0.66
SMAD3-211ENST00000559460 B4GALT3O60512 393 aa10.91□□□□□ -0.66
SMAD3-211ENST00000559460 ZNF623O75123 536 aa10.91□□□□□ -0.66
SMAD3-211ENST00000559460 EPN2O95208 641 aa10.91□□□□□ -0.66
SMAD3-211ENST00000559460 C8AP07357 584 aa10.91□□□□□ -0.66
SMAD3-211ENST00000559460 GNAQP50148 359 aa10.91□□□□□ -0.66
SMAD3-211ENST00000559460 DNM2P50570 870 aa10.91□□□□□ -0.66
SMAD3-211ENST00000559460 PABPC1LQ4VXU2 614 aaKnown RBP10.91□□□□□ -0.66
SMAD3-211ENST00000559460 SH3PXD2AQ5TCZ1 1133 aa10.91□□□□□ -0.66
SMAD3-211ENST00000559460 CACNA2D4Q7Z3S7 1137 aa10.91□□□□□ -0.66
SMAD3-211ENST00000559460 RALYLQ86SE5 291 aaKnown RBP10.91□□□□□ -0.66
SMAD3-211ENST00000559460 NPAS3Q8IXF0 933 aa10.91□□□□□ -0.66
SMAD3-211ENST00000559460 SMAP1Q8IYB5 467 aaPredicted RBP10.91□□□□□ -0.66
SMAD3-211ENST00000559460 ITFG1Q8TB96 612 aa10.91□□□□□ -0.66
SMAD3-211ENST00000559460 IRF7Q92985 503 aa10.91□□□□□ -0.66
SMAD3-211ENST00000559460 COLEC11Q9BWP8 271 aa10.91□□□□□ -0.66
SMAD3-211ENST00000559460 TMEM121BQ9BXQ6 578 aaPredicted RBP10.91□□□□□ -0.66
SMAD3-211ENST00000559460 UBN1Q9NPG3 1134 aa10.91□□□□□ -0.66
SMAD3-211ENST00000559460 VPS45Q9NRW7 570 aa10.91□□□□□ -0.66
SMAD3-211ENST00000559460 DIAPH3Q9NSV4 1193 aa10.91□□□□□ -0.66
SMAD3-211ENST00000559460 GABBR1Q9UBS5 961 aa10.91□□□□□ -0.66
SMAD3-211ENST00000559460 KCNH3Q9ULD8 1083 aa10.91□□□□□ -0.66
SMAD3-211ENST00000559460 MRPS23Q9Y3D9 190 aaKnown RBP10.91□□□□□ -0.66
SMAD3-211ENST00000559460 PCDHB2Q9Y5E7 798 aa10.91□□□□□ -0.66
SMAD3-211ENST00000559460 PCDHGA5Q9Y5G8 931 aa10.91□□□□□ -0.66
SMAD3-211ENST00000559460 MAFBQ9Y5Q3 323 aaPredicted RBP10.91□□□□□ -0.66
SMAD3-211ENST00000559460 ZFYVE26Q68DK2 2539 aa10.91□□□□□ -0.66
SMAD3-211ENST00000559460 GIPC1O14908 333 aa10.9□□□□□ -0.66
SMAD3-211ENST00000559460 RPL17P18621 184 aaKnown RBP10.9□□□□□ -0.66
SMAD3-211ENST00000559460 ATP4AP20648 1035 aa10.9□□□□□ -0.66
SMAD3-211ENST00000559460 HOXA9P31269 272 aa10.9□□□□□ -0.66
SMAD3-211ENST00000559460 MPLP40238 635 aa10.9□□□□□ -0.66
SMAD3-211ENST00000559460 HNRNPUQ00839 825 aaKnown RBP eCLIP10.9□□□□□ -0.662e-6■□□□□ 10.6
SMAD3-211ENST00000559460 TROAPQ12815 778 aa10.9□□□□□ -0.66
SMAD3-211ENST00000559460 SOWAHCQ53LP3 525 aaPredicted RBP10.9□□□□□ -0.66
SMAD3-211ENST00000559460 CYB5R4Q7L1T6 521 aa10.9□□□□□ -0.66
SMAD3-211ENST00000559460 GPR65Q8IYL9 337 aa10.9□□□□□ -0.66
SMAD3-211ENST00000559460 FAM200AQ8TCP9 573 aa10.9□□□□□ -0.66
SMAD3-211ENST00000559460 ELSPBP1Q96BH3 223 aa10.9□□□□□ -0.66
SMAD3-211ENST00000559460 MCRS1Q96EZ8 462 aa10.9□□□□□ -0.66
SMAD3-211ENST00000559460 DSCC1Q9BVC3 393 aa10.9□□□□□ -0.66
SMAD3-211ENST00000559460 TRMT61BQ9BVS5 477 aaKnown RBP10.9□□□□□ -0.66
SMAD3-211ENST00000559460 MARCH5Q9NX47 278 aa10.9□□□□□ -0.66
SMAD3-211ENST00000559460 GDE1Q9NZC3 331 aa10.9□□□□□ -0.66
SMAD3-211ENST00000559460 PIAS3Q9Y6X2 628 aa10.9□□□□□ -0.66
SMAD3-211ENST00000559460 A0A087WZ62 844 aa10.89□□□□□ -0.67
SMAD3-211ENST00000559460 IPO5O00410 1097 aaKnown RBP10.89□□□□□ -0.67
SMAD3-211ENST00000559460 RPP40O75818 363 aaKnown RBP10.89□□□□□ -0.67
SMAD3-211ENST00000559460 FOSP01100 380 aaPredicted RBP10.89□□□□□ -0.67
SMAD3-211ENST00000559460 OATP04181 439 aa10.89□□□□□ -0.67
SMAD3-211ENST00000559460 CEACAM1P13688 526 aa10.89□□□□□ -0.67
SMAD3-211ENST00000559460 RDXP35241 583 aaKnown RBP10.89□□□□□ -0.67
SMAD3-211ENST00000559460 GRM2Q14416 872 aa10.89□□□□□ -0.67
SMAD3-211ENST00000559460 ZNF746Q6NUN9 644 aaPredicted RBP10.89□□□□□ -0.67
SMAD3-211ENST00000559460 FUT10Q6P4F1 479 aa10.89□□□□□ -0.67
SMAD3-211ENST00000559460 LILRA6Q6PI73 481 aa10.89□□□□□ -0.67
SMAD3-211ENST00000559460 C1orf228Q6PIY5 440 aa10.89□□□□□ -0.67
SMAD3-211ENST00000559460 CWC27Q6UX04 472 aaKnown RBP10.89□□□□□ -0.67
SMAD3-211ENST00000559460 AGMOQ6ZNB7 445 aa10.89□□□□□ -0.67
SMAD3-211ENST00000559460 HEATR3Q7Z4Q2 680 aa10.89□□□□□ -0.67
SMAD3-211ENST00000559460 PDZD3Q86UT5 571 aa10.89□□□□□ -0.67
SMAD3-211ENST00000559460 ZNF410Q86VK4 478 aa10.89□□□□□ -0.67
SMAD3-211ENST00000559460 WDR5BQ86VZ2 330 aa10.89□□□□□ -0.67
SMAD3-211ENST00000559460 PLA2G4DQ86XP0 818 aa10.89□□□□□ -0.67
SMAD3-211ENST00000559460 LINC01465Q8N7H1 131 aa10.89□□□□□ -0.67
SMAD3-211ENST00000559460 CNNM3Q8NE01 707 aa10.89□□□□□ -0.67
SMAD3-211ENST00000559460 B3GALT6Q96L58 329 aa10.89□□□□□ -0.67
SMAD3-211ENST00000559460 MBOAT7Q96N66 472 aa10.89□□□□□ -0.67
SMAD3-211ENST00000559460 FDXACB1Q9BRP7 624 aaPredicted RBP10.89□□□□□ -0.67
SMAD3-211ENST00000559460 ZNF577Q9BSK1 485 aa10.89□□□□□ -0.67
SMAD3-211ENST00000559460 MKNK1Q9BUB5 465 aa10.89□□□□□ -0.67
SMAD3-211ENST00000559460 APOL6Q9BWW8 343 aa10.89□□□□□ -0.67
SMAD3-211ENST00000559460 ZFP14Q9HCL3 533 aa10.89□□□□□ -0.67
SMAD3-211ENST00000559460 CHST7Q9NS84 486 aa10.89□□□□□ -0.67
SMAD3-211ENST00000559460 TBC1D22BQ9NU19 505 aa10.89□□□□□ -0.67
SMAD3-211ENST00000559460 FBXW11Q9UKB1 542 aa10.89□□□□□ -0.67
SMAD3-211ENST00000559460 NEUROG3Q9Y4Z2 214 aa10.89□□□□□ -0.67
SMAD3-211ENST00000559460 PCDHA10Q9Y5I2 948 aa10.89□□□□□ -0.67
SMAD3-211ENST00000559460 C4orf47A7E2U8 309 aa10.88□□□□□ -0.67
SMAD3-211ENST00000559460 MEIS1O00470 390 aa10.88□□□□□ -0.67
SMAD3-211ENST00000559460 PAPSS2O95340 614 aaPredicted RBP10.88□□□□□ -0.67
SMAD3-211ENST00000559460 ITGA4P13612 1032 aa10.88□□□□□ -0.67
SMAD3-211ENST00000559460 SDSP20132 328 aa10.88□□□□□ -0.67
SMAD3-211ENST00000559460 SMARCA1P28370 1054 aa10.88□□□□□ -0.67
SMAD3-211ENST00000559460 PDE1AP54750 535 aa10.88□□□□□ -0.67
SMAD3-211ENST00000559460 PTGDRQ13258 359 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms