RNA–Protein interactions for RNA: ENST00000555752.1

SUPT16H-203, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 888 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-203ENST00000555752 BICD2Q8TD16 824 aa21.25■□□□□ 0.99
SUPT16H-203ENST00000555752 TBCKQ8TEA7 893 aa21.25■□□□□ 0.99
SUPT16H-203ENST00000555752 TMEM143Q96AN5 459 aa21.25■□□□□ 0.99
SUPT16H-203ENST00000555752 DOCK6Q96HP0 2047 aa21.25■□□□□ 0.99
SUPT16H-203ENST00000555752 NT5C3AQ9H0P0 336 aa21.25■□□□□ 0.99
SUPT16H-203ENST00000555752 RNF39Q9H2S5 420 aa21.25■□□□□ 0.99
SUPT16H-203ENST00000555752 PIDD1Q9HB75 910 aa21.25■□□□□ 0.99
SUPT16H-203ENST00000555752 MIOSQ9NXC5 875 aa21.25■□□□□ 0.99
SUPT16H-203ENST00000555752 CNTNAP2Q9UHC6 1331 aa21.25■□□□□ 0.99
SUPT16H-203ENST00000555752 GPR179Q6PRD1 2367 aa21.24■□□□□ 0.99
SUPT16H-203ENST00000555752 MTCL1Q9Y4B5 1905 aaKnown RBP21.24■□□□□ 0.99
SUPT16H-203ENST00000555752 NCLP19338 710 aaKnown RBP21.24■□□□□ 0.99
SUPT16H-203ENST00000555752 IRX6P78412 446 aaPredicted RBP21.24■□□□□ 0.99
SUPT16H-203ENST00000555752 FGD1P98174 961 aa21.24■□□□□ 0.99
SUPT16H-203ENST00000555752 RSPO4Q2I0M5 234 aaPredicted RBP21.24■□□□□ 0.99
SUPT16H-203ENST00000555752 TSGA10IPQ3SY00 556 aa21.24■□□□□ 0.99
SUPT16H-203ENST00000555752 Q4G0T1 1027 aa21.24■□□□□ 0.99
SUPT16H-203ENST00000555752 CYP26C1Q6V0L0 522 aa21.24■□□□□ 0.99
SUPT16H-203ENST00000555752 Q6ZUG5 572 aa21.24■□□□□ 0.99
SUPT16H-203ENST00000555752 PJA1Q8NG27 643 aa21.24■□□□□ 0.99
SUPT16H-203ENST00000555752 PRPF31Q8WWY3 499 aaKnown RBP21.24■□□□□ 0.99
SUPT16H-203ENST00000555752 BRF1Q92994 677 aa21.24■□□□□ 0.99
SUPT16H-203ENST00000555752 NXPE3Q969Y0 559 aa21.24■□□□□ 0.99
SUPT16H-203ENST00000555752 CNTNAP3BQ96NU0 1288 aa21.24■□□□□ 0.99
SUPT16H-203ENST00000555752 GAD1Q99259 594 aa21.24■□□□□ 0.99
SUPT16H-203ENST00000555752 EIF2AQ9BY44 585 aaKnown RBP21.24■□□□□ 0.99
SUPT16H-203ENST00000555752 CNTNAP3Q9BZ76 1288 aa21.24■□□□□ 0.99
SUPT16H-203ENST00000555752 SSX2IPQ9Y2D8 614 aa21.24■□□□□ 0.99
SUPT16H-203ENST00000555752 HES2Q9Y543 173 aa21.24■□□□□ 0.99
SUPT16H-203ENST00000555752 EML1O00423 815 aa21.23■□□□□ 0.99
SUPT16H-203ENST00000555752 TGM5O43548 720 aa21.23■□□□□ 0.99
SUPT16H-203ENST00000555752 RPL17P18621 184 aaKnown RBP21.23■□□□□ 0.99
SUPT16H-203ENST00000555752 MLH1P40692 756 aa21.23■□□□□ 0.99
SUPT16H-203ENST00000555752 DSG1Q02413 1049 aa21.23■□□□□ 0.99
SUPT16H-203ENST00000555752 NTRK3Q16288 839 aa21.23■□□□□ 0.99
SUPT16H-203ENST00000555752 SKAP1Q86WV1 359 aa21.23■□□□□ 0.99
SUPT16H-203ENST00000555752 RABGGTAQ92696 567 aa21.23■□□□□ 0.99
SUPT16H-203ENST00000555752 ZFP42Q96MM3 310 aa21.23■□□□□ 0.99
SUPT16H-203ENST00000555752 SLC26A6Q9BXS9 759 aa21.23■□□□□ 0.99
SUPT16H-203ENST00000555752 SLC2A4RGQ9NR83 387 aa21.23■□□□□ 0.99
SUPT16H-203ENST00000555752 WRAP73Q9P2S5 460 aaPredicted RBP21.23■□□□□ 0.99
SUPT16H-203ENST00000555752 CACNA1BQ00975 2339 aa21.22■□□□□ 0.99
SUPT16H-203ENST00000555752 MYH15Q9Y2K3 1946 aa21.22■□□□□ 0.99
SUPT16H-203ENST00000555752 ARL5CA6NH57 179 aa21.22■□□□□ 0.99
SUPT16H-203ENST00000555752 GAS2O43903 313 aaKnown RBP21.22■□□□□ 0.99
SUPT16H-203ENST00000555752 PAPLNO95428 1278 aa21.22■□□□□ 0.99
SUPT16H-203ENST00000555752 ITGA4P13612 1032 aa21.22■□□□□ 0.99
SUPT16H-203ENST00000555752 SCNN1GP51170 649 aa21.22■□□□□ 0.99
SUPT16H-203ENST00000555752 PSMC5P62195 406 aa21.22■□□□□ 0.99
SUPT16H-203ENST00000555752 GPC5P78333 572 aa21.22■□□□□ 0.99
SUPT16H-203ENST00000555752 DSC1Q08554 894 aa21.22■□□□□ 0.99
SUPT16H-203ENST00000555752 ELMSAN1Q6PJG2 1045 aa21.22■□□□□ 0.99
SUPT16H-203ENST00000555752 CCDC148Q8NFR7 591 aa21.22■□□□□ 0.99
SUPT16H-203ENST00000555752 ETNPPLQ8TBG4 499 aa21.22■□□□□ 0.99
SUPT16H-203ENST00000555752 FGF14Q92915 247 aa21.22■□□□□ 0.99
SUPT16H-203ENST00000555752 GPR62Q9BZJ7 368 aa21.22■□□□□ 0.99
SUPT16H-203ENST00000555752 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.22■□□□□ 0.99
SUPT16H-203ENST00000555752 DPP7Q9UHL4 492 aa21.22■□□□□ 0.99
SUPT16H-203ENST00000555752 IPPQ9Y573 584 aa21.22■□□□□ 0.99
SUPT16H-203ENST00000555752 NID2Q14112 1375 aa21.22■□□□□ 0.99
SUPT16H-203ENST00000555752 MIA3Q5JRA6 1907 aa21.21■□□□□ 0.99
SUPT16H-203ENST00000555752 NLRP5P59047 1200 aa21.21■□□□□ 0.99
SUPT16H-203ENST00000555752 NTHL1P78549 312 aa21.21■□□□□ 0.99
SUPT16H-203ENST00000555752 AKAP17AQ02040 695 aaKnown RBP21.21■□□□□ 0.99
SUPT16H-203ENST00000555752 LAMTOR4Q0VGL1 99 aa21.21■□□□□ 0.99
SUPT16H-203ENST00000555752 PARM1Q6UWI2 310 aa21.21■□□□□ 0.99
SUPT16H-203ENST00000555752 SRGAP1Q7Z6B7 1085 aa21.21■□□□□ 0.99
SUPT16H-203ENST00000555752 APOL6Q9BWW8 343 aa21.21■□□□□ 0.99
SUPT16H-203ENST00000555752 PRKD2Q9BZL6 878 aa21.21■□□□□ 0.99
SUPT16H-203ENST00000555752 CHST7Q9NS84 486 aa21.21■□□□□ 0.99
SUPT16H-203ENST00000555752 MTF2Q9Y483 593 aaPredicted RBP21.21■□□□□ 0.99
SUPT16H-203ENST00000555752 TDRD15B5MCY1 1934 aaKnown RBP21.21■□□□□ 0.99
SUPT16H-203ENST00000555752 STARD6P59095 220 aa21.2■□□□□ 0.98
SUPT16H-203ENST00000555752 SNW1Q13573 536 aaKnown RBP21.2■□□□□ 0.98
SUPT16H-203ENST00000555752 KRT32Q14532 448 aa21.2■□□□□ 0.98
SUPT16H-203ENST00000555752 LILRA6Q6PI73 481 aa21.2■□□□□ 0.98
SUPT16H-203ENST00000555752 PSPC1Q8WXF1 523 aaKnown RBP21.2■□□□□ 0.98
SUPT16H-203ENST00000555752 SLC7A3Q8WY07 619 aa21.2■□□□□ 0.98
SUPT16H-203ENST00000555752 CPB2Q96IY4 423 aa21.2■□□□□ 0.98
SUPT16H-203ENST00000555752 CEP170P1Q96L14 293 aa21.2■□□□□ 0.98
SUPT16H-203ENST00000555752 JPH2Q9BR39 696 aaPredicted RBP21.2■□□□□ 0.98
SUPT16H-203ENST00000555752 RNF26Q9BY78 433 aaPredicted RBP21.2■□□□□ 0.98
SUPT16H-203ENST00000555752 PLEKHA4Q9H4M7 779 aa21.2■□□□□ 0.98
SUPT16H-203ENST00000555752 DHX33Q9H6R0 707 aaKnown RBP21.2■□□□□ 0.98
SUPT16H-203ENST00000555752 NCOA5Q9HCD5 579 aaKnown RBP21.2■□□□□ 0.98
SUPT16H-203ENST00000555752 ZDHHC7Q9NXF8 308 aa21.2■□□□□ 0.98
SUPT16H-203ENST00000555752 CACNG4Q9UBN1 327 aa21.2■□□□□ 0.98
SUPT16H-203ENST00000555752 CYP3A7-CYP3A51PA0A087WV96 503 aa21.19■□□□□ 0.98
SUPT16H-203ENST00000555752 SLC37A4O43826 429 aa21.19■□□□□ 0.98
SUPT16H-203ENST00000555752 KINO60870 393 aaKnown RBP21.19■□□□□ 0.98
SUPT16H-203ENST00000555752 CYP3A7P24462 503 aa21.19■□□□□ 0.98
SUPT16H-203ENST00000555752 GRASPQ7Z6J2 395 aaPredicted RBP21.19■□□□□ 0.98
SUPT16H-203ENST00000555752 RNF149Q8NC42 400 aa21.19■□□□□ 0.98
SUPT16H-203ENST00000555752 HDAC7Q8WUI4 952 aa21.19■□□□□ 0.98
SUPT16H-203ENST00000555752 SPATA6Q9NWH7 488 aaPredicted RBP21.19■□□□□ 0.98
SUPT16H-203ENST00000555752 PATJQ8NI35 1801 aa21.19■□□□□ 0.98
SUPT16H-203ENST00000555752 TSPAN1O60635 241 aa21.18■□□□□ 0.98
SUPT16H-203ENST00000555752 HMGB1P09429 215 aaKnown RBP21.18■□□□□ 0.98
SUPT16H-203ENST00000555752 FSHRP23945 695 aa21.18■□□□□ 0.98
SUPT16H-203ENST00000555752 QARSP47897 775 aaKnown RBP21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms