RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 FGF18O76093 207 aa12.27□□□□□ -0.45
SHMT2-216ENST00000554975 OR52Z1P0C646 297 aa12.27□□□□□ -0.45
SHMT2-216ENST00000554975 ATP1A3P13637 1013 aa12.27□□□□□ -0.45
SHMT2-216ENST00000554975 MARK3P27448 753 aa12.27□□□□□ -0.45
SHMT2-216ENST00000554975 UBA7P41226 1012 aa12.27□□□□□ -0.45
SHMT2-216ENST00000554975 TMEM62Q0P6H9 643 aa12.27□□□□□ -0.45
SHMT2-216ENST00000554975 PPFIA1Q13136 1202 aa12.27□□□□□ -0.45
SHMT2-216ENST00000554975 PAK1Q13153 545 aa12.27□□□□□ -0.45
SHMT2-216ENST00000554975 MTMR3Q13615 1198 aa12.27□□□□□ -0.45
SHMT2-216ENST00000554975 GRIK4Q16099 956 aa12.27□□□□□ -0.45
SHMT2-216ENST00000554975 TMEM266Q2M3C6 531 aa12.27□□□□□ -0.45
SHMT2-216ENST00000554975 MCTP2Q6DN12 878 aa12.27□□□□□ -0.45
SHMT2-216ENST00000554975 ARMCX5Q6P1M9 558 aa12.27□□□□□ -0.45
SHMT2-216ENST00000554975 PDXDC2PQ6P474 469 aa12.27□□□□□ -0.45
SHMT2-216ENST00000554975 REXO1Q8N1G1 1221 aaKnown RBP12.27□□□□□ -0.45
SHMT2-216ENST00000554975 FEZF2Q8TBJ5 459 aa12.27□□□□□ -0.45
SHMT2-216ENST00000554975 SRRTQ9BXP5 876 aaKnown RBP12.27□□□□□ -0.45
SHMT2-216ENST00000554975 FAM49AQ9H0Q0 323 aaPredicted RBP12.27□□□□□ -0.45
SHMT2-216ENST00000554975 HSD3B7Q9H2F3 369 aa12.27□□□□□ -0.45
SHMT2-216ENST00000554975 DISC1Q9NRI5 854 aa12.27□□□□□ -0.45
SHMT2-216ENST00000554975 RWDD2AQ9UIY3 292 aa12.27□□□□□ -0.45
SHMT2-216ENST00000554975 PADI3Q9ULW8 664 aa12.27□□□□□ -0.45
SHMT2-216ENST00000554975 CACNA1IQ9P0X4 2223 aa12.27□□□□□ -0.45
SHMT2-216ENST00000554975 GPR179Q6PRD1 2367 aa12.27□□□□□ -0.45
SHMT2-216ENST00000554975 MYH9P35579 1960 aaKnown RBP12.27□□□□□ -0.45
SHMT2-216ENST00000554975 A0A1B0GTH6 734 aa12.26□□□□□ -0.45
SHMT2-216ENST00000554975 WEE2P0C1S8 567 aa12.26□□□□□ -0.45
SHMT2-216ENST00000554975 TCF7P36402 384 aaPredicted RBP12.26□□□□□ -0.45
SHMT2-216ENST00000554975 AMPD3Q01432 767 aa12.26□□□□□ -0.45
SHMT2-216ENST00000554975 UBE3AQ05086 875 aa12.26□□□□□ -0.45
SHMT2-216ENST00000554975 CUL4BQ13620 913 aa12.26□□□□□ -0.45
SHMT2-216ENST00000554975 NEDD9Q14511 834 aa12.26□□□□□ -0.45
SHMT2-216ENST00000554975 UBE2SQ16763 222 aa12.26□□□□□ -0.45
SHMT2-216ENST00000554975 EARS2Q5JPH6 523 aaKnown RBP12.26□□□□□ -0.45
SHMT2-216ENST00000554975 ZNF658Q5TYW1 1059 aaPredicted RBP12.26□□□□□ -0.45
SHMT2-216ENST00000554975 ISM2Q6H9L7 571 aa12.26□□□□□ -0.45
SHMT2-216ENST00000554975 NEK8Q86SG6 692 aa12.26□□□□□ -0.45
SHMT2-216ENST00000554975 CNGA4Q8IV77 575 aa12.26□□□□□ -0.45
SHMT2-216ENST00000554975 TEX2Q8IWB9 1127 aa12.26□□□□□ -0.45
SHMT2-216ENST00000554975 UBALD2Q8IYN6 164 aa12.26□□□□□ -0.45
SHMT2-216ENST00000554975 COLGALT1Q8NBJ5 622 aa12.26□□□□□ -0.45
SHMT2-216ENST00000554975 EPSTI1Q96J88 318 aa12.26□□□□□ -0.45
SHMT2-216ENST00000554975 CDCA3Q99618 268 aaPredicted RBP12.26□□□□□ -0.45
SHMT2-216ENST00000554975 TMEM260Q9NX78 707 aa12.26□□□□□ -0.45
SHMT2-216ENST00000554975 WDR81Q562E7 1941 aa12.25□□□□□ -0.45
SHMT2-216ENST00000554975 GSTTP1A0A1W2PQM5 241 aa12.25□□□□□ -0.45
SHMT2-216ENST00000554975 SPDYE3A6NKU9 549 aa12.25□□□□□ -0.45
SHMT2-216ENST00000554975 MEIS2O14770 477 aa12.25□□□□□ -0.45
SHMT2-216ENST00000554975 STAG3L1P0CL83 205 aa12.25□□□□□ -0.45
SHMT2-216ENST00000554975 GCFC2P16383 781 aaKnown RBP12.25□□□□□ -0.45
SHMT2-216ENST00000554975 BMP6P22004 513 aa12.25□□□□□ -0.45
SHMT2-216ENST00000554975 AFMP43652 599 aa12.25□□□□□ -0.45
SHMT2-216ENST00000554975 IGBP1P78318 339 aa12.25□□□□□ -0.45
SHMT2-216ENST00000554975 GNPTABQ3T906 1256 aa12.25□□□□□ -0.45
SHMT2-216ENST00000554975 SPOUT1Q5T280 376 aaKnown RBP12.25□□□□□ -0.45
SHMT2-216ENST00000554975 FAM102BQ5T8I3 360 aa12.25□□□□□ -0.45
SHMT2-216ENST00000554975 CDKAL1Q5VV42 579 aa12.25□□□□□ -0.45
SHMT2-216ENST00000554975 RRAGBQ5VZM2 374 aa12.25□□□□□ -0.45
SHMT2-216ENST00000554975 DGLUCYQ7Z3D6 616 aa12.25□□□□□ -0.45
SHMT2-216ENST00000554975 RSPH3Q86UC2 560 aa12.25□□□□□ -0.45
SHMT2-216ENST00000554975 PPFIBP1Q86W92 1011 aa12.25□□□□□ -0.45
SHMT2-216ENST00000554975 FAM114A1Q8IWE2 563 aa12.25□□□□□ -0.45
SHMT2-216ENST00000554975 PDCL2Q8N4E4 241 aa12.25□□□□□ -0.45
SHMT2-216ENST00000554975 FLCNQ8NFG4 579 aa12.25□□□□□ -0.45
SHMT2-216ENST00000554975 RASGRP4Q8TDF6 673 aa12.25□□□□□ -0.45
SHMT2-216ENST00000554975 IQCDQ96DY2 449 aa12.25□□□□□ -0.45
SHMT2-216ENST00000554975 PPP1R13BQ96KQ4 1090 aa12.25□□□□□ -0.45
SHMT2-216ENST00000554975 CNTNAP3BQ96NU0 1288 aa12.25□□□□□ -0.45
SHMT2-216ENST00000554975 PANX2Q96RD6 677 aa12.25□□□□□ -0.45
SHMT2-216ENST00000554975 CNTNAP3Q9BZ76 1288 aa12.25□□□□□ -0.45
SHMT2-216ENST00000554975 LRRC27Q9C0I9 530 aa12.25□□□□□ -0.45
SHMT2-216ENST00000554975 CWH43Q9H720 699 aa12.25□□□□□ -0.45
SHMT2-216ENST00000554975 STK17AQ9UEE5 414 aa12.25□□□□□ -0.45
SHMT2-216ENST00000554975 PCDHA6Q9UN73 950 aa12.25□□□□□ -0.45
SHMT2-216ENST00000554975 PCDHB12Q9Y5F1 795 aa12.25□□□□□ -0.45
SHMT2-216ENST00000554975 PCDHA8Q9Y5H6 950 aa12.25□□□□□ -0.45
SHMT2-216ENST00000554975 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.25□□□□□ -0.45
SHMT2-216ENST00000554975 BICDL2A1A5D9 508 aa12.24□□□□□ -0.45
SHMT2-216ENST00000554975 TBKBP1A7MCY6 615 aa12.24□□□□□ -0.45
SHMT2-216ENST00000554975 PIK3CDO00329 1044 aa12.24□□□□□ -0.45
SHMT2-216ENST00000554975 PSMA7O14818 248 aa12.24□□□□□ -0.45
SHMT2-216ENST00000554975 ATP9AO75110 1047 aa12.24□□□□□ -0.45
SHMT2-216ENST00000554975 RPN1P04843 607 aaKnown RBP12.24□□□□□ -0.45
SHMT2-216ENST00000554975 NPR3P17342 541 aa12.24□□□□□ -0.45
SHMT2-216ENST00000554975 CLCN5P51795 746 aa12.24□□□□□ -0.45
SHMT2-216ENST00000554975 ADCY7P51828 1080 aa12.24□□□□□ -0.45
SHMT2-216ENST00000554975 TBX2Q13207 712 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-216ENST00000554975 ANGPT1Q15389 498 aa12.24□□□□□ -0.45
SHMT2-216ENST00000554975 CFAP47Q6ZTR5 3102 aa12.24□□□□□ -0.45
SHMT2-216ENST00000554975 USP49Q70CQ1 688 aa12.24□□□□□ -0.45
SHMT2-216ENST00000554975 THNSL1Q8IYQ7 743 aa12.24□□□□□ -0.45
SHMT2-216ENST00000554975 KIAA2013Q8IYS2 634 aa12.24□□□□□ -0.45
SHMT2-216ENST00000554975 TRAPPC12Q8WVT3 735 aa12.24□□□□□ -0.45
SHMT2-216ENST00000554975 CALML4Q96GE6 196 aa12.24□□□□□ -0.45
SHMT2-216ENST00000554975 FTHL17Q9BXU8 183 aa12.24□□□□□ -0.45
SHMT2-216ENST00000554975 MFSD1Q9H3U5 465 aa12.24□□□□□ -0.45
SHMT2-216ENST00000554975 TYW1Q9NV66 732 aaKnown RBP12.24□□□□□ -0.45
SHMT2-216ENST00000554975 CGNQ9P2M7 1197 aaKnown RBP12.24□□□□□ -0.45
SHMT2-216ENST00000554975 LRFN2Q9ULH4 789 aa12.24□□□□□ -0.45
SHMT2-216ENST00000554975 IGSF9BQ9UPX0 1349 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms