RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 JPH2Q9BR39 696 aaPredicted RBP10.16□□□□□ -0.78
SYNE2-209ENST00000553308 EIF2AQ9BY44 585 aaKnown RBP10.16□□□□□ -0.78
SYNE2-209ENST00000553308 RHOBTB2Q9BYZ6 727 aa10.16□□□□□ -0.78
SYNE2-209ENST00000553308 RNF39Q9H2S5 420 aa10.16□□□□□ -0.78
SYNE2-209ENST00000553308 SEMA4AQ9H3S1 761 aa10.16□□□□□ -0.78
SYNE2-209ENST00000553308 RXFP1Q9HBX9 757 aa10.16□□□□□ -0.78
SYNE2-209ENST00000553308 SH3GLB2Q9NR46 395 aa10.16□□□□□ -0.78
SYNE2-209ENST00000553308 ARHGEF3Q9NR81 526 aa10.16□□□□□ -0.78
SYNE2-209ENST00000553308 DLGAP2Q9P1A6 1054 aa10.16□□□□□ -0.78
SYNE2-209ENST00000553308 PCDHA4Q9UN74 947 aa10.16□□□□□ -0.78
SYNE2-209ENST00000553308 HES2Q9Y543 173 aa10.16□□□□□ -0.78
SYNE2-209ENST00000553308 IPPQ9Y573 584 aa10.16□□□□□ -0.78
SYNE2-209ENST00000553308 VPS13AQ96RL7 3174 aa10.16□□□□□ -0.78
SYNE2-209ENST00000553308 ARID2Q68CP9 1835 aa10.15□□□□□ -0.78
SYNE2-209ENST00000553308 ARL5CA6NH57 179 aa10.15□□□□□ -0.78
SYNE2-209ENST00000553308 POTEMA6NI47 508 aa10.15□□□□□ -0.78
SYNE2-209ENST00000553308 M0R2N6 131 aa10.15□□□□□ -0.78
SYNE2-209ENST00000553308 SP9P0CG40 484 aa10.15□□□□□ -0.78
SYNE2-209ENST00000553308 ITGA4P13612 1032 aa10.15□□□□□ -0.78
SYNE2-209ENST00000553308 GLULP15104 373 aa10.15□□□□□ -0.78
SYNE2-209ENST00000553308 QARSP47897 775 aaKnown RBP10.15□□□□□ -0.78
SYNE2-209ENST00000553308 SCNN1GP51170 649 aa10.15□□□□□ -0.78
SYNE2-209ENST00000553308 DSG1Q02413 1049 aa10.15□□□□□ -0.78
SYNE2-209ENST00000553308 LAMTOR4Q0VGL1 99 aa10.15□□□□□ -0.78
SYNE2-209ENST00000553308 HTR4Q13639 388 aa10.15□□□□□ -0.78
SYNE2-209ENST00000553308 NPY5RQ15761 445 aa10.15□□□□□ -0.78
SYNE2-209ENST00000553308 PHLDB3Q6NSJ2 640 aa10.15□□□□□ -0.78
SYNE2-209ENST00000553308 ELMSAN1Q6PJG2 1045 aa10.15□□□□□ -0.78
SYNE2-209ENST00000553308 DGLUCYQ7Z3D6 616 aa10.15□□□□□ -0.78
SYNE2-209ENST00000553308 PALB2Q86YC2 1186 aa10.15□□□□□ -0.78
SYNE2-209ENST00000553308 BLIDQ8IZY5 108 aa10.15□□□□□ -0.78
SYNE2-209ENST00000553308 RNF149Q8NC42 400 aa10.15□□□□□ -0.78
SYNE2-209ENST00000553308 KCNB2Q92953 911 aa10.15□□□□□ -0.78
SYNE2-209ENST00000553308 CEP170P1Q96L14 293 aa10.15□□□□□ -0.78
SYNE2-209ENST00000553308 HINFPQ9BQA5 517 aa10.15□□□□□ -0.78
SYNE2-209ENST00000553308 AGXT2Q9BYV1 514 aa10.15□□□□□ -0.78
SYNE2-209ENST00000553308 C22orf23Q9BZE7 217 aa10.15□□□□□ -0.78
SYNE2-209ENST00000553308 FOXQ1Q9C009 403 aa10.15□□□□□ -0.78
SYNE2-209ENST00000553308 NT5C3AQ9H0P0 336 aa10.15□□□□□ -0.78
SYNE2-209ENST00000553308 DHX33Q9H6R0 707 aaKnown RBP10.15□□□□□ -0.78
SYNE2-209ENST00000553308 PIDD1Q9HB75 910 aa10.15□□□□□ -0.78
SYNE2-209ENST00000553308 MIOSQ9NXC5 875 aa10.15□□□□□ -0.78
SYNE2-209ENST00000553308 DDX25Q9UHL0 483 aaKnown RBP10.15□□□□□ -0.78
SYNE2-209ENST00000553308 VAV3Q9UKW4 847 aa10.15□□□□□ -0.78
SYNE2-209ENST00000553308 SSX2IPQ9Y2D8 614 aa10.15□□□□□ -0.78
SYNE2-209ENST00000553308 SIT1Q9Y3P8 196 aa10.15□□□□□ -0.78
SYNE2-209ENST00000553308 SNX14Q9Y5W7 946 aa10.15□□□□□ -0.78
SYNE2-209ENST00000553308 NUMBLQ9Y6R0 609 aa10.15□□□□□ -0.78
SYNE2-209ENST00000553308 TDRD15B5MCY1 1934 aaKnown RBP10.14□□□□□ -0.79
SYNE2-209ENST00000553308 ANHXE9PGG2 379 aa10.14□□□□□ -0.79
SYNE2-209ENST00000553308 TGM5O43548 720 aa10.14□□□□□ -0.79
SYNE2-209ENST00000553308 TSPAN1O60635 241 aa10.14□□□□□ -0.79
SYNE2-209ENST00000553308 LRRN2O75325 713 aa10.14□□□□□ -0.79
SYNE2-209ENST00000553308 CDC45O75419 566 aa10.14□□□□□ -0.79
SYNE2-209ENST00000553308 ERLIN2O94905 339 aa10.14□□□□□ -0.79
SYNE2-209ENST00000553308 PAPLNO95428 1278 aa10.14□□□□□ -0.79
SYNE2-209ENST00000553308 LAMP2P13473 410 aa10.14□□□□□ -0.79
SYNE2-209ENST00000553308 RPL17P18621 184 aaKnown RBP10.14□□□□□ -0.79
SYNE2-209ENST00000553308 RPS6KB1P23443 525 aa10.14□□□□□ -0.79
SYNE2-209ENST00000553308 PDIA3P30101 505 aaKnown RBP10.14□□□□□ -0.79
SYNE2-209ENST00000553308 PPP2R5CQ13362 524 aa10.14□□□□□ -0.79
SYNE2-209ENST00000553308 EMC2Q15006 297 aa10.14□□□□□ -0.79
SYNE2-209ENST00000553308 INF2Q27J81 1249 aa10.14□□□□□ -0.79
SYNE2-209ENST00000553308 FUT10Q6P4F1 479 aa10.14□□□□□ -0.79
SYNE2-209ENST00000553308 DCLRE1AQ6PJP8 1040 aa10.14□□□□□ -0.79
SYNE2-209ENST00000553308 ZC3H14Q6PJT7 736 aaKnown RBP10.14□□□□□ -0.79
SYNE2-209ENST00000553308 MOXD1Q6UVY6 613 aa10.14□□□□□ -0.79
SYNE2-209ENST00000553308 FERMT3Q86UX7 667 aa10.14□□□□□ -0.79
SYNE2-209ENST00000553308 C1orf210Q8IVY1 113 aa10.14□□□□□ -0.79
SYNE2-209ENST00000553308 FBXL16Q8N461 479 aa10.14□□□□□ -0.79
SYNE2-209ENST00000553308 DCLK2Q8N568 766 aa10.14□□□□□ -0.79
SYNE2-209ENST00000553308 CNNM3Q8NE01 707 aa10.14□□□□□ -0.79
SYNE2-209ENST00000553308 PJA1Q8NG27 643 aa10.14□□□□□ -0.79
SYNE2-209ENST00000553308 RABGGTAQ92696 567 aa10.14□□□□□ -0.79
SYNE2-209ENST00000553308 NXPE3Q969Y0 559 aa10.14□□□□□ -0.79
SYNE2-209ENST00000553308 CPB2Q96IY4 423 aa10.14□□□□□ -0.79
SYNE2-209ENST00000553308 AIFM3Q96NN9 605 aa10.14□□□□□ -0.79
SYNE2-209ENST00000553308 RPP25Q9BUL9 199 aaKnown RBP10.14□□□□□ -0.79
SYNE2-209ENST00000553308 APOL6Q9BWW8 343 aa10.14□□□□□ -0.79
SYNE2-209ENST00000553308 GPR62Q9BZJ7 368 aa10.14□□□□□ -0.79
SYNE2-209ENST00000553308 UBN1Q9NPG3 1134 aa10.14□□□□□ -0.79
SYNE2-209ENST00000553308 SLC2A4RGQ9NR83 387 aa10.14□□□□□ -0.79
SYNE2-209ENST00000553308 CHST7Q9NS84 486 aa10.14□□□□□ -0.79
SYNE2-209ENST00000553308 ZDHHC7Q9NXF8 308 aa10.14□□□□□ -0.79
SYNE2-209ENST00000553308 CACNG4Q9UBN1 327 aa10.14□□□□□ -0.79
SYNE2-209ENST00000553308 DPP7Q9UHL4 492 aa10.14□□□□□ -0.79
SYNE2-209ENST00000553308 FANCMQ8IYD8 2048 aa10.14□□□□□ -0.79
SYNE2-209ENST00000553308 ZBTB39O15060 712 aa10.13□□□□□ -0.79
SYNE2-209ENST00000553308 GAS2O43903 313 aaKnown RBP10.13□□□□□ -0.79
SYNE2-209ENST00000553308 HSPA4P34932 840 aa10.13□□□□□ -0.79
SYNE2-209ENST00000553308 RFC5P40937 340 aa10.13□□□□□ -0.79
SYNE2-209ENST00000553308 SSRP1Q08945 709 aaKnown RBP10.13□□□□□ -0.79
SYNE2-209ENST00000553308 NOTUMQ6P988 496 aa10.13□□□□□ -0.79
SYNE2-209ENST00000553308 LILRA6Q6PI73 481 aa10.13□□□□□ -0.79
SYNE2-209ENST00000553308 TRIM22Q8IYM9 498 aa10.13□□□□□ -0.79
SYNE2-209ENST00000553308 MAML2Q8IZL2 1156 aaPredicted RBP10.13□□□□□ -0.79
SYNE2-209ENST00000553308 DAGLBQ8NCG7 672 aa10.13□□□□□ -0.79
SYNE2-209ENST00000553308 HDAC7Q8WUI4 952 aa10.13□□□□□ -0.79
SYNE2-209ENST00000553308 RUBCNQ92622 972 aa10.13□□□□□ -0.79
SYNE2-209ENST00000553308 LXNQ9BS40 222 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms