RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 ZFP42Q96MM3 310 aa14.82□□□□□ -0.04
CPSF6-204ENST00000547486 FAM193BQ96PV7 902 aaPredicted RBP14.82□□□□□ -0.04
CPSF6-204ENST00000547486 TMEM175Q9BSA9 504 aa14.82□□□□□ -0.04
CPSF6-204ENST00000547486 POLR3CQ9BUI4 534 aaPredicted RBP14.82□□□□□ -0.04
CPSF6-204ENST00000547486 TUFT1Q9NNX1 390 aa14.82□□□□□ -0.04
CPSF6-204ENST00000547486 DBR1Q9UK59 544 aaKnown RBP14.82□□□□□ -0.04
CPSF6-204ENST00000547486 A0A1B0GUA9 196 aa14.81□□□□□ -0.04
CPSF6-204ENST00000547486 TTLL13PA6NNM8 815 aa14.81□□□□□ -0.04
CPSF6-204ENST00000547486 F8W810 466 aa14.81□□□□□ -0.04
CPSF6-204ENST00000547486 INPPL1O15357 1258 aa14.81□□□□□ -0.04
CPSF6-204ENST00000547486 LILRB3O75022 631 aa14.81□□□□□ -0.04
CPSF6-204ENST00000547486 EFEMP2O95967 443 aa14.81□□□□□ -0.04
CPSF6-204ENST00000547486 SSBP05455 408 aaKnown RBP eCLIP14.81□□□□□ -0.04
CPSF6-204ENST00000547486 OR52Z1P0C646 297 aa14.81□□□□□ -0.04
CPSF6-204ENST00000547486 SP100P23497 879 aaPredicted RBP14.81□□□□□ -0.04
CPSF6-204ENST00000547486 AKAP5P24588 427 aa14.81□□□□□ -0.04
CPSF6-204ENST00000547486 RPA1P27694 616 aa14.81□□□□□ -0.04
CPSF6-204ENST00000547486 MLH1P40692 756 aa14.81□□□□□ -0.04
CPSF6-204ENST00000547486 RBM25P49756 843 aaKnown RBP14.81□□□□□ -0.04
CPSF6-204ENST00000547486 ZXDAP98168 799 aa14.81□□□□□ -0.04
CPSF6-204ENST00000547486 BMS1Q14692 1282 aaKnown RBP14.81□□□□□ -0.04
CPSF6-204ENST00000547486 ECM1Q16610 540 aa14.81□□□□□ -0.04
CPSF6-204ENST00000547486 TPRNQ4KMQ1 711 aa14.81□□□□□ -0.04
CPSF6-204ENST00000547486 TTC38Q5R3I4 469 aa14.81□□□□□ -0.04
CPSF6-204ENST00000547486 POTEGQ6S5H5 508 aa14.81□□□□□ -0.04
CPSF6-204ENST00000547486 NOSTRINQ8IVI9 506 aa14.81□□□□□ -0.04
CPSF6-204ENST00000547486 GSTCDQ8NEC7 633 aa14.81□□□□□ -0.04
CPSF6-204ENST00000547486 BSNDQ8WZ55 320 aa14.81□□□□□ -0.04
CPSF6-204ENST00000547486 CCDC51Q96ER9 411 aa14.81□□□□□ -0.04
CPSF6-204ENST00000547486 CCDC43Q96MW1 224 aaKnown RBP14.81□□□□□ -0.04
CPSF6-204ENST00000547486 NACC1Q96RE7 527 aa14.81□□□□□ -0.04
CPSF6-204ENST00000547486 APOL6Q9BWW8 343 aa14.81□□□□□ -0.04
CPSF6-204ENST00000547486 NXF3Q9H4D5 531 aaKnown RBP14.81□□□□□ -0.04
CPSF6-204ENST00000547486 POMKQ9H5K3 350 aa14.81□□□□□ -0.04
CPSF6-204ENST00000547486 POLD4Q9HCU8 107 aa14.81□□□□□ -0.04
CPSF6-204ENST00000547486 UBN1Q9NPG3 1134 aa14.81□□□□□ -0.04
CPSF6-204ENST00000547486 MARCH5Q9NX47 278 aa14.81□□□□□ -0.04
CPSF6-204ENST00000547486 CARNS1A5YM72 827 aa14.8□□□□□ -0.04
CPSF6-204ENST00000547486 CNPP09543 421 aaKnown RBP14.8□□□□□ -0.04
CPSF6-204ENST00000547486 TOB1P50616 345 aaPredicted RBP14.8□□□□□ -0.04
CPSF6-204ENST00000547486 SCNN1GP51170 649 aa14.8□□□□□ -0.04
CPSF6-204ENST00000547486 HMGN5P82970 282 aaKnown RBP14.8□□□□□ -0.04
CPSF6-204ENST00000547486 ITIH3Q06033 890 aa14.8□□□□□ -0.04
CPSF6-204ENST00000547486 DSC1Q08554 894 aa14.8□□□□□ -0.04
CPSF6-204ENST00000547486 NCBP1Q09161 790 aaKnown RBP14.8□□□□□ -0.04
CPSF6-204ENST00000547486 GIT2Q14161 759 aa14.8□□□□□ -0.04
CPSF6-204ENST00000547486 RARS2Q5T160 578 aaKnown RBP14.8□□□□□ -0.04
CPSF6-204ENST00000547486 PADI6Q6TGC4 694 aa14.8□□□□□ -0.04
CPSF6-204ENST00000547486 TRIM67Q6ZTA4 783 aa14.8□□□□□ -0.04
CPSF6-204ENST00000547486 FAM184AQ8NB25 1140 aa14.8□□□□□ -0.04
CPSF6-204ENST00000547486 KLHL5Q96PQ7 755 aa14.8□□□□□ -0.04
CPSF6-204ENST00000547486 FZD8Q9H461 694 aa14.8□□□□□ -0.04
CPSF6-204ENST00000547486 SH2B1Q9NRF2 756 aaPredicted RBP14.8□□□□□ -0.04
CPSF6-204ENST00000547486 USP20Q9Y2K6 914 aa14.8□□□□□ -0.04
CPSF6-204ENST00000547486 PRG3Q9Y2Y8 225 aaPredicted RBP14.8□□□□□ -0.04
CPSF6-204ENST00000547486 TMEM221A6NGB7 291 aa14.79□□□□□ -0.04
CPSF6-204ENST00000547486 LRRIQ4A6NIV6 560 aa14.79□□□□□ -0.04
CPSF6-204ENST00000547486 M0R296 226 aa14.79□□□□□ -0.04
CPSF6-204ENST00000547486 NPTXRO95502 500 aa14.79□□□□□ -0.04
CPSF6-204ENST00000547486 CYP11B2P19099 503 aa14.79□□□□□ -0.04
CPSF6-204ENST00000547486 U2AF2P26368 475 aaKnown RBP eCLIP14.79□□□□□ -0.043e-7■■■■□ 20.4
CPSF6-204ENST00000547486 OR1G1P47890 313 aa14.79□□□□□ -0.04
CPSF6-204ENST00000547486 ORC2Q13416 577 aaPredicted RBP14.79□□□□□ -0.04
CPSF6-204ENST00000547486 CES5AQ6NT32 575 aa14.79□□□□□ -0.04
CPSF6-204ENST00000547486 SLC27A1Q6PCB7 646 aa14.79□□□□□ -0.04
CPSF6-204ENST00000547486 TMEM87AQ8NBN3 555 aa14.79□□□□□ -0.04
CPSF6-204ENST00000547486 MCPH1Q8NEM0 835 aa14.79□□□□□ -0.04
CPSF6-204ENST00000547486 RABGGTAQ92696 567 aa14.79□□□□□ -0.04
CPSF6-204ENST00000547486 TSHZ2Q9NRE2 1034 aa14.79□□□□□ -0.04
CPSF6-204ENST00000547486 KLK14Q9P0G3 267 aa14.79□□□□□ -0.04
CPSF6-204ENST00000547486 GIT1Q9Y2X7 761 aa14.79□□□□□ -0.04
CPSF6-204ENST00000547486 WDFY4Q6ZS81 3184 aa14.78□□□□□ -0.04
CPSF6-204ENST00000547486 C2CD4DB7Z1M9 353 aa14.78□□□□□ -0.04
CPSF6-204ENST00000547486 C2CD2LO14523 706 aa14.78□□□□□ -0.04
CPSF6-204ENST00000547486 CENPBP07199 599 aaPredicted RBP14.78□□□□□ -0.04
CPSF6-204ENST00000547486 KLRC2P26717 231 aa14.78□□□□□ -0.04
CPSF6-204ENST00000547486 CLCN4P51793 760 aa14.78□□□□□ -0.04
CPSF6-204ENST00000547486 CDCA2Q69YH5 1023 aaPredicted RBP14.78□□□□□ -0.04
CPSF6-204ENST00000547486 TMC5Q6UXY8 1006 aa14.78□□□□□ -0.04
CPSF6-204ENST00000547486 PPP4R3CPQ6ZMV5 832 aa14.78□□□□□ -0.04
CPSF6-204ENST00000547486 BMP8AQ7Z5Y6 402 aa14.78□□□□□ -0.04
CPSF6-204ENST00000547486 RNF168Q8IYW5 571 aaPredicted RBP14.78□□□□□ -0.04
CPSF6-204ENST00000547486 ERMNQ8TAM6 284 aa14.78□□□□□ -0.04
CPSF6-204ENST00000547486 TRIM6Q9C030 488 aaPredicted RBP14.78□□□□□ -0.04
CPSF6-204ENST00000547486 CXCL16Q9H2A7 254 aa14.78□□□□□ -0.04
CPSF6-204ENST00000547486 MRPL17Q9NRX2 175 aaKnown RBP14.78□□□□□ -0.04
CPSF6-204ENST00000547486 PCDHB6Q9Y5E3 794 aa14.78□□□□□ -0.04
CPSF6-204ENST00000547486 TECTAO75443 2155 aa14.77□□□□□ -0.04
CPSF6-204ENST00000547486 ARHGEF35A5YM69 484 aa14.77□□□□□ -0.05
CPSF6-204ENST00000547486 SOD2P04179 222 aa14.77□□□□□ -0.05
CPSF6-204ENST00000547486 EDN1P05305 212 aa14.77□□□□□ -0.05
CPSF6-204ENST00000547486 MTHFRP42898 656 aa14.77□□□□□ -0.05
CPSF6-204ENST00000547486 TRAPPC10P48553 1259 aa14.77□□□□□ -0.05
CPSF6-204ENST00000547486 FXR2P51116 673 aaKnown RBP eCLIP14.77□□□□□ -0.05
CPSF6-204ENST00000547486 PTGDRQ13258 359 aa14.77□□□□□ -0.05
CPSF6-204ENST00000547486 GNL2Q13823 731 aaKnown RBP14.77□□□□□ -0.05
CPSF6-204ENST00000547486 IL17AQ16552 155 aa14.77□□□□□ -0.05
CPSF6-204ENST00000547486 PTPN21Q16825 1174 aa14.77□□□□□ -0.05
CPSF6-204ENST00000547486 FAM187BQ17R55 369 aa14.77□□□□□ -0.05
CPSF6-204ENST00000547486 ATAT1Q5SQI0 421 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms