RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 RAB27AP51159 221 aa22.5■■□□□ 1.19
HMGA2-211ENST00000545998 EHHADHQ08426 723 aa22.5■■□□□ 1.19
HMGA2-211ENST00000545998 KANK3Q6NY19 840 aa22.5■■□□□ 1.19
HMGA2-211ENST00000545998 SLC27A1Q6PCB7 646 aa22.5■■□□□ 1.19
HMGA2-211ENST00000545998 TIGD1Q96MW7 591 aa22.5■■□□□ 1.19
HMGA2-211ENST00000545998 RAD9AQ99638 391 aa22.5■■□□□ 1.19
HMGA2-211ENST00000545998 ACO2Q99798 780 aaKnown RBP22.5■■□□□ 1.19
HMGA2-211ENST00000545998 STRA6Q9BX79 667 aa22.5■■□□□ 1.19
HMGA2-211ENST00000545998 LRFN2Q9ULH4 789 aa22.5■■□□□ 1.19
HMGA2-211ENST00000545998 PCDHB2Q9Y5E7 798 aa22.5■■□□□ 1.19
HMGA2-211ENST00000545998 N4BP3O15049 544 aa22.5■■□□□ 1.19
HMGA2-211ENST00000545998 TLL1O43897 1013 aa22.5■■□□□ 1.19
HMGA2-211ENST00000545998 KLRC4O43908 158 aa22.5■■□□□ 1.19
HMGA2-211ENST00000545998 PPP1R37O75864 691 aa22.5■■□□□ 1.19
HMGA2-211ENST00000545998 EOMESO95936 686 aa22.5■■□□□ 1.19
HMGA2-211ENST00000545998 PRR29P0C7W0 189 aa22.5■■□□□ 1.19
HMGA2-211ENST00000545998 ZC2HC1CQ53FD0 456 aaPredicted RBP22.5■■□□□ 1.19
HMGA2-211ENST00000545998 ATF7IP2Q5U623 682 aa22.5■■□□□ 1.19
HMGA2-211ENST00000545998 FGFBP2Q9BYJ0 223 aa22.5■■□□□ 1.19
HMGA2-211ENST00000545998 RC3H2Q9HBD1 1191 aaKnown RBP22.5■■□□□ 1.19
HMGA2-211ENST00000545998 DGKIO75912 1065 aa22.49■■□□□ 1.19
HMGA2-211ENST00000545998 MYOGP15173 224 aa22.49■■□□□ 1.19
HMGA2-211ENST00000545998 CASP5P51878 434 aa22.49■■□□□ 1.19
HMGA2-211ENST00000545998 DPYDQ12882 1025 aa22.49■■□□□ 1.19
HMGA2-211ENST00000545998 RAB30Q15771 203 aa22.49■■□□□ 1.19
HMGA2-211ENST00000545998 TMEM132AQ24JP5 1023 aa22.49■■□□□ 1.19
HMGA2-211ENST00000545998 EEF1DP3Q658K8 133 aa22.49■■□□□ 1.19
HMGA2-211ENST00000545998 MRPL10Q7Z7H8 261 aaKnown RBP22.49■■□□□ 1.19
HMGA2-211ENST00000545998 HPS3Q969F9 1004 aa22.49■■□□□ 1.19
HMGA2-211ENST00000545998 ZNF689Q96CS4 500 aaPredicted RBP22.49■■□□□ 1.19
HMGA2-211ENST00000545998 CCDC34Q96HJ3 373 aa22.49■■□□□ 1.19
HMGA2-211ENST00000545998 TARS2Q9BW92 718 aaKnown RBP22.49■■□□□ 1.19
HMGA2-211ENST00000545998 TNFSF13BQ9Y275 285 aa22.49■■□□□ 1.19
HMGA2-211ENST00000545998 YBX2Q9Y2T7 364 aaKnown RBP22.49■■□□□ 1.19
HMGA2-211ENST00000545998 INSL6Q9Y581 213 aa22.49■■□□□ 1.19
HMGA2-211ENST00000545998 TRANK1O15050 2925 aa22.48■■□□□ 1.19
HMGA2-211ENST00000545998 MYBP10242 640 aa22.48■■□□□ 1.19
HMGA2-211ENST00000545998 MAP4K3Q8IVH8 894 aa22.48■■□□□ 1.19
HMGA2-211ENST00000545998 SMG8Q8ND04 991 aaKnown RBP22.48■■□□□ 1.19
HMGA2-211ENST00000545998 HVCN1Q96D96 273 aa22.48■■□□□ 1.19
HMGA2-211ENST00000545998 YME1L1Q96TA2 773 aa22.48■■□□□ 1.19
HMGA2-211ENST00000545998 PTPRHQ9HD43 1115 aa22.48■■□□□ 1.19
HMGA2-211ENST00000545998 LMBRD1Q9NUN5 540 aa22.48■■□□□ 1.19
HMGA2-211ENST00000545998 RNF19AQ9NV58 838 aa22.48■■□□□ 1.19
HMGA2-211ENST00000545998 MSRAQ9UJ68 235 aa22.48■■□□□ 1.19
HMGA2-211ENST00000545998 IPPQ9Y573 584 aa22.48■■□□□ 1.19
HMGA2-211ENST00000545998 GCNT3O95395 438 aa22.47■■□□□ 1.19
HMGA2-211ENST00000545998 NPTXRO95502 500 aa22.47■■□□□ 1.19
HMGA2-211ENST00000545998 PROZP22891 400 aa22.47■■□□□ 1.19
HMGA2-211ENST00000545998 DNAJB2P25686 324 aa22.47■■□□□ 1.19
HMGA2-211ENST00000545998 POSTNQ15063 836 aa22.47■■□□□ 1.19
HMGA2-211ENST00000545998 ZPBP2Q6X784 338 aa22.47■■□□□ 1.19
HMGA2-211ENST00000545998 RNF169Q8NCN4 708 aa22.47■■□□□ 1.19
HMGA2-211ENST00000545998 LRCH3Q96II8 777 aa22.47■■□□□ 1.19
HMGA2-211ENST00000545998 TRIM6Q9C030 488 aaPredicted RBP22.47■■□□□ 1.19
HMGA2-211ENST00000545998 PCDHB13Q9Y5F0 798 aa22.47■■□□□ 1.19
HMGA2-211ENST00000545998 LCHNA4D1U4 455 aa22.46■■□□□ 1.19
HMGA2-211ENST00000545998 PIGRP01833 764 aa22.46■■□□□ 1.19
HMGA2-211ENST00000545998 RPN1P04843 607 aaKnown RBP22.46■■□□□ 1.19
HMGA2-211ENST00000545998 FGFR1P11362 822 aa22.46■■□□□ 1.19
HMGA2-211ENST00000545998 ALCAMQ13740 583 aa22.46■■□□□ 1.19
HMGA2-211ENST00000545998 FAM26FQ5R3K3 315 aa22.46■■□□□ 1.19
HMGA2-211ENST00000545998 ELOA2Q8IYF1 753 aaPredicted RBP22.46■■□□□ 1.19
HMGA2-211ENST00000545998 GLIS3Q8NEA6 775 aa22.46■■□□□ 1.19
HMGA2-211ENST00000545998 SP7Q8TDD2 431 aaPredicted RBP22.46■■□□□ 1.19
HMGA2-211ENST00000545998 LPPQ93052 612 aa22.46■■□□□ 1.19
HMGA2-211ENST00000545998 ADPGKQ9BRR6 497 aa22.46■■□□□ 1.19
HMGA2-211ENST00000545998 MEIS3P2A8K0S8 358 aa22.46■■□□□ 1.19
HMGA2-211ENST00000545998 ABLIM1O14639 778 aa22.46■■□□□ 1.19
HMGA2-211ENST00000545998 KINO60870 393 aaKnown RBP22.46■■□□□ 1.19
HMGA2-211ENST00000545998 TOM1L1O75674 476 aa22.46■■□□□ 1.19
HMGA2-211ENST00000545998 CA3P07451 260 aa22.46■■□□□ 1.19
HMGA2-211ENST00000545998 GATMP50440 423 aa22.46■■□□□ 1.19
HMGA2-211ENST00000545998 PNOCQ13519 176 aa22.46■■□□□ 1.19
HMGA2-211ENST00000545998 DCAF4L1Q3SXM0 396 aa22.46■■□□□ 1.19
HMGA2-211ENST00000545998 KMT5BQ4FZB7 885 aa22.46■■□□□ 1.19
HMGA2-211ENST00000545998 L1TD1Q5T7N2 865 aaKnown RBP22.46■■□□□ 1.19
HMGA2-211ENST00000545998 PGBD4Q96DM1 585 aa22.46■■□□□ 1.19
HMGA2-211ENST00000545998 NXF3Q9H4D5 531 aaKnown RBP22.46■■□□□ 1.19
HMGA2-211ENST00000545998 EXOC1Q9NV70 894 aa22.46■■□□□ 1.19
HMGA2-211ENST00000545998 HES2Q9Y543 173 aa22.46■■□□□ 1.19
HMGA2-211ENST00000545998 HOXA2O43364 376 aa22.45■■□□□ 1.18
HMGA2-211ENST00000545998 KCNA1Q09470 495 aa22.45■■□□□ 1.18
HMGA2-211ENST00000545998 CLLU1OSQ5K130 101 aa22.45■■□□□ 1.18
HMGA2-211ENST00000545998 MPZL3Q6UWV2 235 aa22.45■■□□□ 1.18
HMGA2-211ENST00000545998 AGMOQ6ZNB7 445 aa22.45■■□□□ 1.18
HMGA2-211ENST00000545998 EPM2AIP1Q7L775 607 aaPredicted RBP22.45■■□□□ 1.18
HMGA2-211ENST00000545998 TIFAQ96CG3 184 aa22.45■■□□□ 1.18
HMGA2-211ENST00000545998 BICD1Q96G01 975 aa22.45■■□□□ 1.18
HMGA2-211ENST00000545998 ZBTB45Q96K62 511 aaPredicted RBP22.45■■□□□ 1.18
HMGA2-211ENST00000545998 CDT1Q9H211 546 aa22.45■■□□□ 1.18
HMGA2-211ENST00000545998 RNF39Q9H2S5 420 aa22.45■■□□□ 1.18
HMGA2-211ENST00000545998 NKX2-4Q9H2Z4 354 aa22.45■■□□□ 1.18
HMGA2-211ENST00000545998 HNRNPDLO14979 420 aaKnown RBP22.44■■□□□ 1.18
HMGA2-211ENST00000545998 LIG4P49917 911 aa22.44■■□□□ 1.18
HMGA2-211ENST00000545998 ZNF568Q3ZCX4 644 aa22.44■■□□□ 1.18
HMGA2-211ENST00000545998 CASD1Q96PB1 797 aa22.44■■□□□ 1.18
HMGA2-211ENST00000545998 ACCSQ96QU6 501 aa22.44■■□□□ 1.18
HMGA2-211ENST00000545998 MYO9BQ13459 2157 aa22.44■■□□□ 1.18
HMGA2-211ENST00000545998 EIF3DO15371 548 aaKnown RBP eCLIP22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms