RNA–Protein interactions for RNA: ENST00000545210.5

TMEM258-208, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-208ENST00000545210 RASEFQ8IZ41 740 aa12.88□□□□□ -0.35
TMEM258-208ENST00000545210 SUMF1Q8NBK3 374 aa12.88□□□□□ -0.35
TMEM258-208ENST00000545210 PJA1Q8NG27 643 aa12.88□□□□□ -0.35
TMEM258-208ENST00000545210 RDM1Q8NG50 284 aa12.88□□□□□ -0.35
TMEM258-208ENST00000545210 B3GALT6Q96L58 329 aa12.88□□□□□ -0.35
TMEM258-208ENST00000545210 CNTNAP3BQ96NU0 1288 aa12.88□□□□□ -0.35
TMEM258-208ENST00000545210 CNTNAP3Q9BZ76 1288 aa12.88□□□□□ -0.35
TMEM258-208ENST00000545210 NT5C3AQ9H0P0 336 aa12.88□□□□□ -0.35
TMEM258-208ENST00000545210 MINDY3Q9H8M7 445 aa12.88□□□□□ -0.35
TMEM258-208ENST00000545210 RXFP1Q9HBX9 757 aa12.88□□□□□ -0.35
TMEM258-208ENST00000545210 COL4A3BPQ9Y5P4 624 aa12.88□□□□□ -0.35
TMEM258-208ENST00000545210 NUMBLQ9Y6R0 609 aa12.88□□□□□ -0.35
TMEM258-208ENST00000545210 GAS2O43903 313 aaKnown RBP12.87□□□□□ -0.35
TMEM258-208ENST00000545210 EFEMP2O95967 443 aa12.87□□□□□ -0.35
TMEM258-208ENST00000545210 CPA1P15085 419 aa12.87□□□□□ -0.35
TMEM258-208ENST00000545210 NCLP19338 710 aaKnown RBP12.87□□□□□ -0.35
TMEM258-208ENST00000545210 DSG1Q02413 1049 aa12.87□□□□□ -0.35
TMEM258-208ENST00000545210 B3GNT9Q6UX72 402 aa12.87□□□□□ -0.35
TMEM258-208ENST00000545210 RNF168Q8IYW5 571 aaPredicted RBP12.87□□□□□ -0.35
TMEM258-208ENST00000545210 MAML2Q8IZL2 1156 aaPredicted RBP12.87□□□□□ -0.35
TMEM258-208ENST00000545210 SMG8Q8ND04 991 aaKnown RBP12.87□□□□□ -0.35
TMEM258-208ENST00000545210 TBCKQ8TEA7 893 aa12.87□□□□□ -0.35
TMEM258-208ENST00000545210 PRPF31Q8WWY3 499 aaKnown RBP12.87□□□□□ -0.35
TMEM258-208ENST00000545210 RPP25Q9BUL9 199 aaKnown RBP12.87□□□□□ -0.35
TMEM258-208ENST00000545210 PLEKHA4Q9H4M7 779 aa12.87□□□□□ -0.35
TMEM258-208ENST00000545210 SLC2A4RGQ9NR83 387 aa12.87□□□□□ -0.35
TMEM258-208ENST00000545210 VPS54Q9P1Q0 977 aa12.87□□□□□ -0.35
TMEM258-208ENST00000545210 EPG5Q9HCE0 2579 aa12.87□□□□□ -0.35
TMEM258-208ENST00000545210 ARL5CA6NH57 179 aa12.86□□□□□ -0.35
TMEM258-208ENST00000545210 TGM5O43548 720 aa12.86□□□□□ -0.35
TMEM258-208ENST00000545210 KINO60870 393 aaKnown RBP12.86□□□□□ -0.35
TMEM258-208ENST00000545210 PAPLNO95428 1278 aa12.86□□□□□ -0.35
TMEM258-208ENST00000545210 TDP2O95551 362 aa12.86□□□□□ -0.35
TMEM258-208ENST00000545210 ITGA4P13612 1032 aa12.86□□□□□ -0.35
TMEM258-208ENST00000545210 MLH1P40692 756 aa12.86□□□□□ -0.35
TMEM258-208ENST00000545210 NPEPPSP55786 919 aa12.86□□□□□ -0.35
TMEM258-208ENST00000545210 GPC5P78333 572 aa12.86□□□□□ -0.35
TMEM258-208ENST00000545210 AKAP17AQ02040 695 aaKnown RBP12.86□□□□□ -0.35
TMEM258-208ENST00000545210 TSGA10IPQ3SY00 556 aa12.86□□□□□ -0.35
TMEM258-208ENST00000545210 Q4G0T1 1027 aa12.86□□□□□ -0.35
TMEM258-208ENST00000545210 ZNF579Q8NAF0 562 aaKnown RBP12.86□□□□□ -0.35
TMEM258-208ENST00000545210 CCDC148Q8NFR7 591 aa12.86□□□□□ -0.35
TMEM258-208ENST00000545210 HDAC7Q8WUI4 952 aa12.86□□□□□ -0.35
TMEM258-208ENST00000545210 SLC7A3Q8WY07 619 aa12.86□□□□□ -0.35
TMEM258-208ENST00000545210 TMEM143Q96AN5 459 aa12.86□□□□□ -0.35
TMEM258-208ENST00000545210 ZFP42Q96MM3 310 aa12.86□□□□□ -0.35
TMEM258-208ENST00000545210 GAD1Q99259 594 aa12.86□□□□□ -0.35
TMEM258-208ENST00000545210 JPH2Q9BR39 696 aaPredicted RBP12.86□□□□□ -0.35
TMEM258-208ENST00000545210 PRKD2Q9BZL6 878 aa12.86□□□□□ -0.35
TMEM258-208ENST00000545210 RNF39Q9H2S5 420 aa12.86□□□□□ -0.35
TMEM258-208ENST00000545210 UBN1Q9NPG3 1134 aa12.86□□□□□ -0.35
TMEM258-208ENST00000545210 BMP2KQ9NSY1 1161 aaPredicted RBP12.86□□□□□ -0.35
TMEM258-208ENST00000545210 ZDHHC7Q9NXF8 308 aa12.86□□□□□ -0.35
TMEM258-208ENST00000545210 NOTCH4Q99466 2003 aa12.86□□□□□ -0.35
TMEM258-208ENST00000545210 RPL17P18621 184 aaKnown RBP12.85□□□□□ -0.35
TMEM258-208ENST00000545210 SCNN1GP51170 649 aa12.85□□□□□ -0.35
TMEM258-208ENST00000545210 STARD6P59095 220 aa12.85□□□□□ -0.35
TMEM258-208ENST00000545210 PSMC5P62195 406 aa12.85□□□□□ -0.35
TMEM258-208ENST00000545210 DSC1Q08554 894 aa12.85□□□□□ -0.35
TMEM258-208ENST00000545210 LAMTOR4Q0VGL1 99 aa12.85□□□□□ -0.35
TMEM258-208ENST00000545210 SNW1Q13573 536 aaKnown RBP12.85□□□□□ -0.35
TMEM258-208ENST00000545210 KRT32Q14532 448 aa12.85□□□□□ -0.35
TMEM258-208ENST00000545210 PARM1Q6UWI2 310 aa12.85□□□□□ -0.35
TMEM258-208ENST00000545210 Q6ZUG5 572 aa12.85□□□□□ -0.35
TMEM258-208ENST00000545210 SRGAP1Q7Z6B7 1085 aa12.85□□□□□ -0.35
TMEM258-208ENST00000545210 ETNPPLQ8TBG4 499 aa12.85□□□□□ -0.35
TMEM258-208ENST00000545210 PSPC1Q8WXF1 523 aaKnown RBP12.85□□□□□ -0.35
TMEM258-208ENST00000545210 FGF14Q92915 247 aa12.85□□□□□ -0.35
TMEM258-208ENST00000545210 BRF1Q92994 677 aa12.85□□□□□ -0.35
TMEM258-208ENST00000545210 SHDQ96IW2 340 aa12.85□□□□□ -0.35
TMEM258-208ENST00000545210 SLC26A6Q9BXS9 759 aa12.85□□□□□ -0.35
TMEM258-208ENST00000545210 EIF2AQ9BY44 585 aaKnown RBP12.85□□□□□ -0.35
TMEM258-208ENST00000545210 GPR62Q9BZJ7 368 aa12.85□□□□□ -0.35
TMEM258-208ENST00000545210 CHST7Q9NS84 486 aa12.85□□□□□ -0.35
TMEM258-208ENST00000545210 SPATA6Q9NWH7 488 aaPredicted RBP12.85□□□□□ -0.35
TMEM258-208ENST00000545210 MIOSQ9NXC5 875 aa12.85□□□□□ -0.35
TMEM258-208ENST00000545210 NCDNQ9UBB6 729 aa12.85□□□□□ -0.35
TMEM258-208ENST00000545210 HES2Q9Y543 173 aa12.85□□□□□ -0.35
TMEM258-208ENST00000545210 IPPQ9Y573 584 aa12.85□□□□□ -0.35
TMEM258-208ENST00000545210 VWA8A3KMH1 1905 aa12.85□□□□□ -0.35
TMEM258-208ENST00000545210 NID2Q14112 1375 aa12.84□□□□□ -0.35
TMEM258-208ENST00000545210 KANSL1LA0AUZ9 987 aa12.84□□□□□ -0.35
TMEM258-208ENST00000545210 NR1I2O75469 434 aa12.84□□□□□ -0.35
TMEM258-208ENST00000545210 ERLIN2O94905 339 aa12.84□□□□□ -0.35
TMEM258-208ENST00000545210 HMGB1P09429 215 aaKnown RBP12.84□□□□□ -0.35
TMEM258-208ENST00000545210 FSHRP23945 695 aa12.84□□□□□ -0.35
TMEM258-208ENST00000545210 NLRP5P59047 1200 aa12.84□□□□□ -0.35
TMEM258-208ENST00000545210 IRX6P78412 446 aaPredicted RBP12.84□□□□□ -0.35
TMEM258-208ENST00000545210 NTRK3Q16288 839 aa12.84□□□□□ -0.35
TMEM258-208ENST00000545210 VARS2Q5ST30 1063 aaKnown RBP12.84□□□□□ -0.35
TMEM258-208ENST00000545210 LILRA6Q6PI73 481 aa12.84□□□□□ -0.35
TMEM258-208ENST00000545210 RNF149Q8NC42 400 aa12.84□□□□□ -0.35
TMEM258-208ENST00000545210 CNNM3Q8NE01 707 aa12.84□□□□□ -0.35
TMEM258-208ENST00000545210 RABGGTAQ92696 567 aa12.84□□□□□ -0.35
TMEM258-208ENST00000545210 CEP170P1Q96L14 293 aa12.84□□□□□ -0.35
TMEM258-208ENST00000545210 APOL6Q9BWW8 343 aa12.84□□□□□ -0.35
TMEM258-208ENST00000545210 RNF26Q9BY78 433 aaPredicted RBP12.84□□□□□ -0.35
TMEM258-208ENST00000545210 MTF2Q9Y483 593 aaPredicted RBP12.84□□□□□ -0.35
TMEM258-208ENST00000545210 RALGAPA1Q6GYQ0 2036 aa12.84□□□□□ -0.35
TMEM258-208ENST00000545210 CYP3A7-CYP3A51PA0A087WV96 503 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms