RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 PCDHGA3Q9Y5H0 932 aa3.14□□□□□ -1.91
YBX3-214ENST00000544501 PCDHGA2Q9Y5H1 932 aa3.14□□□□□ -1.91
YBX3-214ENST00000544501 FAM171A2A8MVW0 826 aa3.13□□□□□ -1.91
YBX3-214ENST00000544501 K7ESM1 405 aa3.13□□□□□ -1.91
YBX3-214ENST00000544501 XPOTO43592 962 aaKnown RBP3.13□□□□□ -1.91
YBX3-214ENST00000544501 FOXS1O43638 330 aa3.13□□□□□ -1.91
YBX3-214ENST00000544501 AKR1B10O60218 316 aa3.13□□□□□ -1.91
YBX3-214ENST00000544501 ZNF623O75123 536 aa3.13□□□□□ -1.91
YBX3-214ENST00000544501 NDUFS2O75306 463 aa3.13□□□□□ -1.91
YBX3-214ENST00000544501 ENDOD1O94919 500 aa3.13□□□□□ -1.91
YBX3-214ENST00000544501 SNUPNO95149 360 aaKnown RBP3.13□□□□□ -1.91
YBX3-214ENST00000544501 GSPT1P15170 499 aaKnown RBP3.13□□□□□ -1.91
YBX3-214ENST00000544501 SLC16A1P53985 500 aa3.13□□□□□ -1.91
YBX3-214ENST00000544501 EPHB1P54762 984 aa3.13□□□□□ -1.91
YBX3-214ENST00000544501 ADKP55263 362 aaKnown RBP3.13□□□□□ -1.91
YBX3-214ENST00000544501 CCT2P78371 535 aaKnown RBP3.13□□□□□ -1.91
YBX3-214ENST00000544501 PPP3CAQ08209 521 aa3.13□□□□□ -1.91
YBX3-214ENST00000544501 TTF1Q15361 905 aaPredicted RBP3.13□□□□□ -1.91
YBX3-214ENST00000544501 PLEKHG6Q3KR16 790 aa3.13□□□□□ -1.91
YBX3-214ENST00000544501 MFSD5Q6N075 450 aa3.13□□□□□ -1.91
YBX3-214ENST00000544501 FAM111BQ6SJ93 734 aa3.13□□□□□ -1.91
YBX3-214ENST00000544501 PDZD4Q76G19 769 aaPredicted RBP3.13□□□□□ -1.91
YBX3-214ENST00000544501 FUKQ8N0W3 1084 aa3.13□□□□□ -1.91
YBX3-214ENST00000544501 ZNF480Q8WV37 535 aa3.13□□□□□ -1.91
YBX3-214ENST00000544501 EDAQ92838 391 aa3.13□□□□□ -1.91
YBX3-214ENST00000544501 CYFIP2Q96F07 1278 aa3.13□□□□□ -1.91
YBX3-214ENST00000544501 TEKT5Q96M29 485 aa3.13□□□□□ -1.91
YBX3-214ENST00000544501 OR14A2Q96R54 314 aa3.13□□□□□ -1.91
YBX3-214ENST00000544501 SMAD5Q99717 465 aaKnown RBP3.13□□□□□ -1.91
YBX3-214ENST00000544501 TCF25Q9BQ70 676 aa3.13□□□□□ -1.91
YBX3-214ENST00000544501 BCO1Q9HAY6 547 aa3.13□□□□□ -1.91
YBX3-214ENST00000544501 CD248Q9HCU0 757 aa3.13□□□□□ -1.91
YBX3-214ENST00000544501 TLR9Q9NR96 1032 aa3.13□□□□□ -1.91
YBX3-214ENST00000544501 GPRC5DQ9NZD1 345 aa3.13□□□□□ -1.91
YBX3-214ENST00000544501 PPM1GO15355 546 aaPredicted RBP3.12□□□□□ -1.91
YBX3-214ENST00000544501 HOXA3O43365 443 aaPredicted RBP3.12□□□□□ -1.91
YBX3-214ENST00000544501 ITGA10O75578 1167 aa3.12□□□□□ -1.91
YBX3-214ENST00000544501 S100BP04271 92 aaPredicted RBP3.12□□□□□ -1.91
YBX3-214ENST00000544501 VCAM1P19320 739 aa3.12□□□□□ -1.91
YBX3-214ENST00000544501 C5AR1P21730 350 aa3.12□□□□□ -1.91
YBX3-214ENST00000544501 COMTP21964 271 aa3.12□□□□□ -1.91
YBX3-214ENST00000544501 ECHS1P30084 290 aa3.12□□□□□ -1.91
YBX3-214ENST00000544501 GZMKP49863 264 aa3.12□□□□□ -1.91
YBX3-214ENST00000544501 HHEXQ03014 270 aa3.12□□□□□ -1.91
YBX3-214ENST00000544501 MCL1Q07820 350 aa3.12□□□□□ -1.91
YBX3-214ENST00000544501 EFEMP1Q12805 493 aa3.12□□□□□ -1.91
YBX3-214ENST00000544501 FOXL1Q12952 345 aa3.12□□□□□ -1.91
YBX3-214ENST00000544501 MRPL49Q13405 166 aaKnown RBP3.12□□□□□ -1.91
YBX3-214ENST00000544501 ICAM4Q14773 271 aa3.12□□□□□ -1.91
YBX3-214ENST00000544501 ODF1Q14990 250 aa3.12□□□□□ -1.91
YBX3-214ENST00000544501 ACAP1Q15027 740 aa3.12□□□□□ -1.91
YBX3-214ENST00000544501 METTL24Q5JXM2 366 aa3.12□□□□□ -1.91
YBX3-214ENST00000544501 ODR4Q5SWX8 454 aa3.12□□□□□ -1.91
YBX3-214ENST00000544501 FKBP15Q5T1M5 1219 aa3.12□□□□□ -1.91
YBX3-214ENST00000544501 Q6ZVL8 140 aa3.12□□□□□ -1.91
YBX3-214ENST00000544501 APBB1IPQ7Z5R6 666 aaPredicted RBP3.12□□□□□ -1.91
YBX3-214ENST00000544501 THEMISQ8N1K5 641 aaPredicted RBP3.12□□□□□ -1.91
YBX3-214ENST00000544501 ANKRD35Q8N283 1001 aa3.12□□□□□ -1.91
YBX3-214ENST00000544501 CPA6Q8N4T0 437 aa3.12□□□□□ -1.91
YBX3-214ENST00000544501 LILRA3Q8N6C8 439 aaPredicted RBP3.12□□□□□ -1.91
YBX3-214ENST00000544501 CHST13Q8NET6 341 aa3.12□□□□□ -1.91
YBX3-214ENST00000544501 OR7D4Q8NG98 312 aa3.12□□□□□ -1.91
YBX3-214ENST00000544501 OR5M3Q8NGP4 307 aa3.12□□□□□ -1.91
YBX3-214ENST00000544501 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.12□□□□□ -1.91
YBX3-214ENST00000544501 Q8TCH9 128 aa3.12□□□□□ -1.91
YBX3-214ENST00000544501 HOXB13Q92826 284 aaPredicted RBP3.12□□□□□ -1.91
YBX3-214ENST00000544501 ARL8AQ96BM9 186 aa3.12□□□□□ -1.91
YBX3-214ENST00000544501 IL17RAQ96F46 866 aa3.12□□□□□ -1.91
YBX3-214ENST00000544501 FAM89AQ96GI7 184 aa3.12□□□□□ -1.91
YBX3-214ENST00000544501 LOXL4Q96JB6 756 aa3.12□□□□□ -1.91
YBX3-214ENST00000544501 ZNF512Q96ME7 567 aaPredicted RBP3.12□□□□□ -1.91
YBX3-214ENST00000544501 WWC2-AS2Q96NR7 200 aa3.12□□□□□ -1.91
YBX3-214ENST00000544501 SLC2A13Q96QE2 648 aa3.12□□□□□ -1.91
YBX3-214ENST00000544501 CDC5LQ99459 802 aaKnown RBP3.12□□□□□ -1.91
YBX3-214ENST00000544501 NUP88Q99567 741 aaPredicted RBP3.12□□□□□ -1.91
YBX3-214ENST00000544501 PDCD2LQ9BRP1 358 aa3.12□□□□□ -1.91
YBX3-214ENST00000544501 CSRNP2Q9H175 543 aa3.12□□□□□ -1.91
YBX3-214ENST00000544501 SMPD4Q9NXE4 827 aa3.12□□□□□ -1.91
YBX3-214ENST00000544501 NCDNQ9UBB6 729 aa3.12□□□□□ -1.91
YBX3-214ENST00000544501 HECAQ9UBI9 543 aaPredicted RBP3.12□□□□□ -1.91
YBX3-214ENST00000544501 TRPS1Q9UHF7 1281 aa3.12□□□□□ -1.91
YBX3-214ENST00000544501 TUBD1Q9UJT1 453 aa3.12□□□□□ -1.91
YBX3-214ENST00000544501 JAG2Q9Y219 1238 aa3.12□□□□□ -1.91
YBX3-214ENST00000544501 CYP27B1O15528 508 aa3.11□□□□□ -1.91
YBX3-214ENST00000544501 MFAP3LO75121 409 aa3.11□□□□□ -1.91
YBX3-214ENST00000544501 IPO13O94829 963 aaKnown RBP3.11□□□□□ -1.91
YBX3-214ENST00000544501 ABLIM3O94929 683 aa3.11□□□□□ -1.91
YBX3-214ENST00000544501 AKAP5P24588 427 aa3.11□□□□□ -1.91
YBX3-214ENST00000544501 ADSLP30566 484 aaPredicted RBP3.11□□□□□ -1.91
YBX3-214ENST00000544501 MSX2P35548 267 aaPredicted RBP3.11□□□□□ -1.91
YBX3-214ENST00000544501 SREBF1P36956 1147 aa3.11□□□□□ -1.91
YBX3-214ENST00000544501 CASRP41180 1078 aa3.11□□□□□ -1.91
YBX3-214ENST00000544501 MAGEA10P43363 369 aaPredicted RBP3.11□□□□□ -1.91
YBX3-214ENST00000544501 SELENOPP49908 381 aa3.11□□□□□ -1.91
YBX3-214ENST00000544501 PIN1Q13526 163 aaPredicted RBP3.11□□□□□ -1.91
YBX3-214ENST00000544501 NOMO1Q15155 1222 aa3.11□□□□□ -1.91
YBX3-214ENST00000544501 SPATS1Q496A3 300 aa3.11□□□□□ -1.91
YBX3-214ENST00000544501 MAMDC4Q6UXC1 1216 aa3.11□□□□□ -1.91
YBX3-214ENST00000544501 Q6ZSN1 163 aa3.11□□□□□ -1.91
YBX3-214ENST00000544501 DOK3Q7L591 496 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms