RNA–Protein interactions for RNA: ENST00000540999.5

TCF4-207, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,572 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-207ENST00000540999 SUPT3HO75486 399 aa9.5□□□□□ -0.89
TCF4-207ENST00000540999 KRT18P05783 430 aaKnown RBP9.5□□□□□ -0.89
TCF4-207ENST00000540999 ATXN8OSP0DMR3 200 aa9.5□□□□□ -0.89
TCF4-207ENST00000540999 TNFAIP3P21580 790 aa9.5□□□□□ -0.89
TCF4-207ENST00000540999 FNTAP49354 379 aa9.5□□□□□ -0.89
TCF4-207ENST00000540999 GMPSP49915 693 aaPredicted RBP9.5□□□□□ -0.89
TCF4-207ENST00000540999 PDE6CP51160 858 aa9.5□□□□□ -0.89
TCF4-207ENST00000540999 NLRP5P59047 1200 aa9.5□□□□□ -0.89
TCF4-207ENST00000540999 SNW1Q13573 536 aaKnown RBP9.5□□□□□ -0.89
TCF4-207ENST00000540999 SLC39A14Q15043 492 aa9.5□□□□□ -0.89
TCF4-207ENST00000540999 TRIM71Q2Q1W2 868 aaKnown RBP9.5□□□□□ -0.89
TCF4-207ENST00000540999 IGSF11Q5DX21 431 aa9.5□□□□□ -0.89
TCF4-207ENST00000540999 ZNF362Q5T0B9 420 aaPredicted RBP9.5□□□□□ -0.89
TCF4-207ENST00000540999 TATDN1Q6P1N9 297 aa9.5□□□□□ -0.89
TCF4-207ENST00000540999 NLRP9Q7RTR0 991 aa9.5□□□□□ -0.89
TCF4-207ENST00000540999 DDX42Q86XP3 938 aaKnown RBP eCLIP9.5□□□□□ -0.89
TCF4-207ENST00000540999 IFNL1Q8IU54 200 aa9.5□□□□□ -0.89
TCF4-207ENST00000540999 FSIP1Q8NA03 581 aa9.5□□□□□ -0.89
TCF4-207ENST00000540999 ATP6V1E2Q96A05 226 aa9.5□□□□□ -0.89
TCF4-207ENST00000540999 RPGRIP1Q96KN7 1286 aa9.5□□□□□ -0.89
TCF4-207ENST00000540999 PIGSQ96S52 555 aa9.5□□□□□ -0.89
TCF4-207ENST00000540999 CGREF1Q99674 301 aa9.5□□□□□ -0.89
TCF4-207ENST00000540999 FOXP1Q9H334 677 aaPredicted RBP9.5□□□□□ -0.89
TCF4-207ENST00000540999 ACBD3Q9H3P7 528 aa9.5□□□□□ -0.89
TCF4-207ENST00000540999 HOOK1Q9UJC3 728 aaKnown RBP9.5□□□□□ -0.89
TCF4-207ENST00000540999 TMCO1Q9UM00 188 aa9.5□□□□□ -0.89
TCF4-207ENST00000540999 AP3B1O00203 1094 aa9.5□□□□□ -0.89
TCF4-207ENST00000540999 OLFM2O95897 454 aa9.5□□□□□ -0.89
TCF4-207ENST00000540999 GH2P01242 217 aa9.5□□□□□ -0.89
TCF4-207ENST00000540999 MTHFD1P11586 935 aaKnown RBP9.5□□□□□ -0.89
TCF4-207ENST00000540999 EVI2BP34910 448 aa9.5□□□□□ -0.89
TCF4-207ENST00000540999 KRT2P35908 639 aa9.5□□□□□ -0.89
TCF4-207ENST00000540999 CCT6AP40227 531 aaKnown RBP9.5□□□□□ -0.89
TCF4-207ENST00000540999 SEPHS1P49903 392 aa9.5□□□□□ -0.89
TCF4-207ENST00000540999 NDUFA8P51970 172 aa9.5□□□□□ -0.89
TCF4-207ENST00000540999 MARSP56192 900 aaKnown RBP9.5□□□□□ -0.89
TCF4-207ENST00000540999 PLOD1Q02809 727 aaPredicted RBP9.5□□□□□ -0.89
TCF4-207ENST00000540999 CCDC153Q494R4 210 aa9.5□□□□□ -0.89
TCF4-207ENST00000540999 CEP85LQ5SZL2 805 aa9.5□□□□□ -0.89
TCF4-207ENST00000540999 ATL3Q6DD88 541 aa9.5□□□□□ -0.89
TCF4-207ENST00000540999 LVRNQ6Q4G3 990 aa9.5□□□□□ -0.89
TCF4-207ENST00000540999 BTNL9Q6UXG8 535 aa9.5□□□□□ -0.89
TCF4-207ENST00000540999 CCDC84Q86UT8 332 aaPredicted RBP9.5□□□□□ -0.89
TCF4-207ENST00000540999 ARHGAP18Q8N392 663 aa9.5□□□□□ -0.89
TCF4-207ENST00000540999 PDCD7Q8N8D1 485 aaKnown RBP9.5□□□□□ -0.89
TCF4-207ENST00000540999 SMC1BQ8NDV3 1235 aa9.5□□□□□ -0.89
TCF4-207ENST00000540999 CDKL2Q92772 493 aa9.5□□□□□ -0.89
TCF4-207ENST00000540999 TNFRSF25Q93038 417 aa9.5□□□□□ -0.89
TCF4-207ENST00000540999 ARL8AQ96BM9 186 aa9.5□□□□□ -0.89
TCF4-207ENST00000540999 HOOK2Q96ED9 719 aa9.5□□□□□ -0.89
TCF4-207ENST00000540999 COG8Q96MW5 612 aa9.5□□□□□ -0.89
TCF4-207ENST00000540999 TRPV6Q9H1D0 765 aa9.5□□□□□ -0.89
TCF4-207ENST00000540999 CD93Q9NPY3 652 aa9.5□□□□□ -0.89
TCF4-207ENST00000540999 MOCS1Q9NZB8 636 aa9.5□□□□□ -0.89
TCF4-207ENST00000540999 TMOD2Q9NZR1 351 aa9.5□□□□□ -0.89
TCF4-207ENST00000540999 HERC5Q9UII4 1024 aaKnown RBP9.5□□□□□ -0.89
TCF4-207ENST00000540999 FAM184BQ9ULE4 1060 aa9.5□□□□□ -0.89
TCF4-207ENST00000540999 EXOC7Q9UPT5 735 aa9.5□□□□□ -0.89
TCF4-207ENST00000540999 ATRNL1Q5VV63 1379 aa9.49□□□□□ -0.89
TCF4-207ENST00000540999 TRAV6A0A075B6T7 132 aa9.49□□□□□ -0.89
TCF4-207ENST00000540999 ACTN4O43707 911 aaKnown RBP9.49□□□□□ -0.89
TCF4-207ENST00000540999 YEATS4O95619 227 aa9.49□□□□□ -0.89
TCF4-207ENST00000540999 PRKACBP22694 351 aa9.49□□□□□ -0.89
TCF4-207ENST00000540999 HNF1BP35680 557 aa9.49□□□□□ -0.89
TCF4-207ENST00000540999 CLCN6P51797 869 aa9.49□□□□□ -0.89
TCF4-207ENST00000540999 TSPY1Q01534 308 aa9.49□□□□□ -0.89
TCF4-207ENST00000540999 MOGSQ13724 837 aa9.49□□□□□ -0.89
TCF4-207ENST00000540999 C15orf59Q2T9L4 293 aaPredicted RBP9.49□□□□□ -0.89
TCF4-207ENST00000540999 CCDC14Q49A88 953 aa9.49□□□□□ -0.89
TCF4-207ENST00000540999 FOXP4Q8IVH2 680 aaPredicted RBP9.49□□□□□ -0.89
TCF4-207ENST00000540999 MICALL2Q8IY33 904 aa9.49□□□□□ -0.89
TCF4-207ENST00000540999 CCDC148Q8NFR7 591 aa9.49□□□□□ -0.89
TCF4-207ENST00000540999 NUP88Q99567 741 aaPredicted RBP9.49□□□□□ -0.89
TCF4-207ENST00000540999 NUP62CLQ9H1M0 184 aa9.49□□□□□ -0.89
TCF4-207ENST00000540999 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.49□□□□□ -0.89
TCF4-207ENST00000540999 SPON1Q9HCB6 807 aa9.49□□□□□ -0.89
TCF4-207ENST00000540999 XAB2Q9HCS7 855 aaKnown RBP9.49□□□□□ -0.89
TCF4-207ENST00000540999 UBN1Q9NPG3 1134 aa9.49□□□□□ -0.89
TCF4-207ENST00000540999 EDARQ9UNE0 448 aa9.49□□□□□ -0.89
TCF4-207ENST00000540999 SATB2Q9UPW6 733 aa9.49□□□□□ -0.89
TCF4-207ENST00000540999 EPN1Q9Y6I3 576 aaPredicted RBP9.49□□□□□ -0.89
TCF4-207ENST00000540999 NDC80O14777 642 aa9.49□□□□□ -0.89
TCF4-207ENST00000540999 PIP5K1CO60331 668 aa9.49□□□□□ -0.89
TCF4-207ENST00000540999 SMIM24O75264 130 aa9.49□□□□□ -0.89
TCF4-207ENST00000540999 MAP3K6O95382 1288 aa9.49□□□□□ -0.89
TCF4-207ENST00000540999 ADCY8P40145 1251 aa9.49□□□□□ -0.89
TCF4-207ENST00000540999 NT5C2P49902 561 aa9.49□□□□□ -0.89
TCF4-207ENST00000540999 BPIFB4P59827 614 aa9.49□□□□□ -0.89
TCF4-207ENST00000540999 SKOR1P84550 965 aa9.49□□□□□ -0.89
TCF4-207ENST00000540999 ROR1Q01973 937 aa9.49□□□□□ -0.89
TCF4-207ENST00000540999 ABCB5Q2M3G0 1257 aa9.49□□□□□ -0.89
TCF4-207ENST00000540999 KRT71Q3SY84 523 aa9.49□□□□□ -0.89
TCF4-207ENST00000540999 HIBCHQ6NVY1 386 aaPredicted RBP9.49□□□□□ -0.89
TCF4-207ENST00000540999 PIK3AP1Q6ZUJ8 805 aa9.49□□□□□ -0.89
TCF4-207ENST00000540999 LUZP1Q86V48 1076 aa9.49□□□□□ -0.89
TCF4-207ENST00000540999 CCDC116Q8IYX3 515 aa9.49□□□□□ -0.89
TCF4-207ENST00000540999 ENGASEQ8NFI3 743 aa9.49□□□□□ -0.89
TCF4-207ENST00000540999 FAM151AQ8WW52 585 aa9.49□□□□□ -0.89
TCF4-207ENST00000540999 ZNF653Q96CK0 615 aa9.49□□□□□ -0.89
TCF4-207ENST00000540999 ZBED3Q96IU2 234 aaPredicted RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms