RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 VAMP7P51809 220 aa13.87□□□□□ -0.19
MSH6-210ENST00000540021 RCN2Q14257 317 aa13.87□□□□□ -0.19
MSH6-210ENST00000540021 CRYMQ14894 314 aa13.87□□□□□ -0.19
MSH6-210ENST00000540021 PPP1R21Q6ZMI0 780 aa13.87□□□□□ -0.19
MSH6-210ENST00000540021 ARHGEF1Q92888 912 aaKnown RBP13.87□□□□□ -0.19
MSH6-210ENST00000540021 MCM8Q9UJA3 840 aa13.87□□□□□ -0.19
MSH6-210ENST00000540021 BCL9O00512 1426 aa13.87□□□□□ -0.19
MSH6-210ENST00000540021 UBAP1LF5GYI3 381 aa13.86□□□□□ -0.19
MSH6-210ENST00000540021 F5H6K3 240 aa13.86□□□□□ -0.19
MSH6-210ENST00000540021 PI4K2BG5E9Z4 385 aa13.86□□□□□ -0.19
MSH6-210ENST00000540021 RBAK-RBAKDNI3L0D1 243 aa13.86□□□□□ -0.19
MSH6-210ENST00000540021 PLS3P13797 630 aa13.86□□□□□ -0.19
MSH6-210ENST00000540021 RPA1P27694 616 aa13.86□□□□□ -0.19
MSH6-210ENST00000540021 COILP38432 576 aaPredicted RBP13.86□□□□□ -0.19
MSH6-210ENST00000540021 KLRC3Q07444 240 aa13.86□□□□□ -0.19
MSH6-210ENST00000540021 C3orf20Q8ND61 904 aa13.86□□□□□ -0.19
MSH6-210ENST00000540021 PWWP2AQ96N64 755 aa13.86□□□□□ -0.19
MSH6-210ENST00000540021 ATP6V0A4Q9HBG4 840 aa13.86□□□□□ -0.19
MSH6-210ENST00000540021 SGK1O00141 431 aa13.86□□□□□ -0.19
MSH6-210ENST00000540021 PYGMP11217 842 aa13.86□□□□□ -0.19
MSH6-210ENST00000540021 ITGA8P53708 1063 aa13.86□□□□□ -0.19
MSH6-210ENST00000540021 CBWD6Q4V339 395 aa13.86□□□□□ -0.19
MSH6-210ENST00000540021 CBWD3Q5JTY5 395 aa13.86□□□□□ -0.19
MSH6-210ENST00000540021 CBWD5Q5RIA9 395 aa13.86□□□□□ -0.19
MSH6-210ENST00000540021 SYDE2Q5VT97 1194 aa13.86□□□□□ -0.19
MSH6-210ENST00000540021 ZNF572Q7Z3I7 529 aaPredicted RBP13.86□□□□□ -0.19
MSH6-210ENST00000540021 SYT2Q8N9I0 419 aaPredicted RBP13.86□□□□□ -0.19
MSH6-210ENST00000540021 DTX3LQ8TDB6 740 aa13.86□□□□□ -0.19
MSH6-210ENST00000540021 ZNF526Q8TF50 670 aaPredicted RBP13.86□□□□□ -0.19
MSH6-210ENST00000540021 TMEM237Q96Q45 408 aa13.86□□□□□ -0.19
MSH6-210ENST00000540021 TEKT3Q9BXF9 490 aa13.86□□□□□ -0.19
MSH6-210ENST00000540021 HAO1Q9UJM8 370 aa13.86□□□□□ -0.19
MSH6-210ENST00000540021 M0R2N6 131 aa13.86□□□□□ -0.19
MSH6-210ENST00000540021 SLC16A4O15374 487 aa13.86□□□□□ -0.19
MSH6-210ENST00000540021 EYA4O95677 639 aa13.86□□□□□ -0.19
MSH6-210ENST00000540021 BMP3P12645 472 aa13.86□□□□□ -0.19
MSH6-210ENST00000540021 LMBRD2Q68DH5 695 aaPredicted RBP13.86□□□□□ -0.19
MSH6-210ENST00000540021 ZSWIM1Q9BR11 485 aa13.86□□□□□ -0.19
MSH6-210ENST00000540021 MYO3BQ8WXR4 1341 aa13.86□□□□□ -0.19
MSH6-210ENST00000540021 MAPK13O15264 365 aa13.85□□□□□ -0.19
MSH6-210ENST00000540021 RIPK2O43353 540 aa13.85□□□□□ -0.19
MSH6-210ENST00000540021 CD58P19256 250 aa13.85□□□□□ -0.19
MSH6-210ENST00000540021 BFSP1Q12934 665 aa13.85□□□□□ -0.19
MSH6-210ENST00000540021 RINT1Q6NUQ1 792 aa13.85□□□□□ -0.19
MSH6-210ENST00000540021 PALB2Q86YC2 1186 aa13.85□□□□□ -0.19
MSH6-210ENST00000540021 PALM2Q8IXS6 379 aa13.85□□□□□ -0.19
MSH6-210ENST00000540021 KLF6Q99612 283 aaPredicted RBP13.85□□□□□ -0.19
MSH6-210ENST00000540021 VCXQ9H320 206 aa13.85□□□□□ -0.19
MSH6-210ENST00000540021 KCTD10Q9H3F6 313 aa13.85□□□□□ -0.19
MSH6-210ENST00000540021 C1orf112Q9NSG2 853 aa13.85□□□□□ -0.19
MSH6-210ENST00000540021 AJAP1Q9UKB5 411 aaPredicted RBP13.85□□□□□ -0.19
MSH6-210ENST00000540021 SGPL1O95470 568 aa13.85□□□□□ -0.19
MSH6-210ENST00000540021 GH2P01242 217 aa13.85□□□□□ -0.19
MSH6-210ENST00000540021 IZUMO3Q5VZ72 239 aa13.85□□□□□ -0.19
MSH6-210ENST00000540021 ZC3H18Q86VM9 953 aaKnown RBP13.85□□□□□ -0.19
MSH6-210ENST00000540021 SLC13A5Q86YT5 568 aaPredicted RBP13.85□□□□□ -0.19
MSH6-210ENST00000540021 CCT6BQ92526 530 aa13.85□□□□□ -0.19
MSH6-210ENST00000540021 ZBTB10Q96DT7 871 aa13.85□□□□□ -0.19
MSH6-210ENST00000540021 C11orf70Q9BRQ4 267 aa13.85□□□□□ -0.19
MSH6-210ENST00000540021 PITPNM2Q9BZ72 1349 aa13.85□□□□□ -0.19
MSH6-210ENST00000540021 IGSF9BQ9UPX0 1349 aa13.85□□□□□ -0.19
MSH6-210ENST00000540021 PPP1R18Q6NYC8 613 aa13.85□□□□□ -0.19
MSH6-210ENST00000540021 ARHGAP27Q6ZUM4 889 aa13.85□□□□□ -0.19
MSH6-210ENST00000540021 COL23A1Q86Y22 540 aaPredicted RBP13.85□□□□□ -0.19
MSH6-210ENST00000540021 PDCD7Q8N8D1 485 aaKnown RBP13.85□□□□□ -0.19
MSH6-210ENST00000540021 CFAP61Q8NHU2 1237 aa13.85□□□□□ -0.19
MSH6-210ENST00000540021 MAIP1Q8WWC4 291 aa13.85□□□□□ -0.19
MSH6-210ENST00000540021 FAM20AQ96MK3 541 aa13.85□□□□□ -0.19
MSH6-210ENST00000540021 TSC22D3Q99576 134 aa13.85□□□□□ -0.19
MSH6-210ENST00000540021 C15orf41Q9Y2V0 281 aa13.85□□□□□ -0.19
MSH6-210ENST00000540021 STK24Q9Y6E0 443 aa13.85□□□□□ -0.19
MSH6-210ENST00000540021 GPR75-ASB3A0A0A6YYF3 556 aa13.84□□□□□ -0.19
MSH6-210ENST00000540021 CFAP69A5D8W1 941 aa13.84□□□□□ -0.19
MSH6-210ENST00000540021 TISP43B9A030 160 aa13.84□□□□□ -0.19
MSH6-210ENST00000540021 TXNDC9O14530 226 aa13.84□□□□□ -0.19
MSH6-210ENST00000540021 HNRNPDLO14979 420 aaKnown RBP13.84□□□□□ -0.19
MSH6-210ENST00000540021 MSH4O15457 936 aa13.84□□□□□ -0.19
MSH6-210ENST00000540021 CREB1P16220 341 aa13.84□□□□□ -0.19
MSH6-210ENST00000540021 PPP4CP60510 307 aa13.84□□□□□ -0.19
MSH6-210ENST00000540021 ITIH4Q14624 930 aa13.84□□□□□ -0.19
MSH6-210ENST00000540021 ARSHQ5FYA8 562 aa13.84□□□□□ -0.19
MSH6-210ENST00000540021 SYCP2LQ5T4T6 812 aa13.84□□□□□ -0.19
MSH6-210ENST00000540021 PADI6Q6TGC4 694 aa13.84□□□□□ -0.19
MSH6-210ENST00000540021 ERICH1Q86X53 443 aa13.84□□□□□ -0.19
MSH6-210ENST00000540021 CCDC89Q8N998 374 aa13.84□□□□□ -0.19
MSH6-210ENST00000540021 CPA5Q8WXQ8 436 aa13.84□□□□□ -0.19
MSH6-210ENST00000540021 KAT5Q92993 513 aa13.84□□□□□ -0.19
MSH6-210ENST00000540021 SNF8Q96H20 258 aa13.84□□□□□ -0.19
MSH6-210ENST00000540021 RILPQ96NA2 401 aa13.84□□□□□ -0.19
MSH6-210ENST00000540021 CYTH2Q99418 400 aa13.84□□□□□ -0.19
MSH6-210ENST00000540021 WNT8AQ9H1J5 351 aa13.84□□□□□ -0.19
MSH6-210ENST00000540021 C4AP0C0L4 1744 aa13.84□□□□□ -0.19
MSH6-210ENST00000540021 C4BP0C0L5 1744 aa13.84□□□□□ -0.19
MSH6-210ENST00000540021 KIAA0391O15091 583 aaKnown RBP13.84□□□□□ -0.19
MSH6-210ENST00000540021 SLC16A3O15427 465 aaKnown RBP13.84□□□□□ -0.19
MSH6-210ENST00000540021 CALCAP01258 141 aa13.84□□□□□ -0.19
MSH6-210ENST00000540021 CCND1P24385 295 aa13.84□□□□□ -0.19
MSH6-210ENST00000540021 HOXA7P31268 230 aaPredicted RBP13.84□□□□□ -0.19
MSH6-210ENST00000540021 AP3B2Q13367 1082 aa13.84□□□□□ -0.19
MSH6-210ENST00000540021 SPARCL1Q14515 664 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms