RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 GJC2Q5T442 439 aaPredicted RBP6.81□□□□□ -1.32
PRKDC-208ENST00000536710 THEMIS2Q5TEJ8 643 aa6.81□□□□□ -1.32
PRKDC-208ENST00000536710 RSPH3Q86UC2 560 aa6.81□□□□□ -1.32
PRKDC-208ENST00000536710 SVIPQ8NHG7 77 aa6.81□□□□□ -1.32
PRKDC-208ENST00000536710 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.81□□□□□ -1.32
PRKDC-208ENST00000536710 CCHCR1Q8TD31 782 aa6.81□□□□□ -1.32
PRKDC-208ENST00000536710 SPATA25Q9BR10 227 aa6.81□□□□□ -1.32
PRKDC-208ENST00000536710 B3GNT5Q9BYG0 378 aa6.81□□□□□ -1.32
PRKDC-208ENST00000536710 KIAA1683Q9H0B3 1180 aa6.81□□□□□ -1.32
PRKDC-208ENST00000536710 NR2E3Q9Y5X4 410 aa6.81□□□□□ -1.32
PRKDC-208ENST00000536710 TCAF2A6NFQ2 919 aa6.8□□□□□ -1.32
PRKDC-208ENST00000536710 PMM2O15305 246 aa6.8□□□□□ -1.32
PRKDC-208ENST00000536710 ALDH1A2O94788 518 aa6.8□□□□□ -1.32
PRKDC-208ENST00000536710 ZBED1O96006 694 aa6.8□□□□□ -1.32
PRKDC-208ENST00000536710 PHKG2P15735 406 aa6.8□□□□□ -1.32
PRKDC-208ENST00000536710 SYN1P17600 705 aa6.8□□□□□ -1.32
PRKDC-208ENST00000536710 GLDCP23378 1020 aa6.8□□□□□ -1.32
PRKDC-208ENST00000536710 TRIM68Q6AZZ1 485 aa6.8□□□□□ -1.32
PRKDC-208ENST00000536710 MCTP2Q6DN12 878 aa6.8□□□□□ -1.32
PRKDC-208ENST00000536710 NPNTQ6UXI9 565 aa6.8□□□□□ -1.32
PRKDC-208ENST00000536710 ATG14Q6ZNE5 492 aa6.8□□□□□ -1.32
PRKDC-208ENST00000536710 Q6ZUG5 572 aa6.8□□□□□ -1.32
PRKDC-208ENST00000536710 LARP4Q71RC2 724 aaKnown RBP eCLIP6.8□□□□□ -1.32
PRKDC-208ENST00000536710 TAS1R1Q7RTX1 841 aa6.8□□□□□ -1.32
PRKDC-208ENST00000536710 GPR155Q7Z3F1 870 aa6.8□□□□□ -1.32
PRKDC-208ENST00000536710 MSL3Q8N5Y2 521 aaKnown RBP6.8□□□□□ -1.32
PRKDC-208ENST00000536710 SAMD3Q8N6K7 520 aa6.8□□□□□ -1.32
PRKDC-208ENST00000536710 PLA2G15Q8NCC3 412 aa6.8□□□□□ -1.32
PRKDC-208ENST00000536710 ZNF526Q8TF50 670 aaPredicted RBP6.8□□□□□ -1.32
PRKDC-208ENST00000536710 ZNF480Q8WV37 535 aa6.8□□□□□ -1.32
PRKDC-208ENST00000536710 CLPTM1LQ96KA5 538 aa6.8□□□□□ -1.32
PRKDC-208ENST00000536710 CARD11Q9BXL7 1154 aa6.8□□□□□ -1.32
PRKDC-208ENST00000536710 TMEM60Q9H2L4 133 aa6.8□□□□□ -1.32
PRKDC-208ENST00000536710 MANSC1Q9H8J5 431 aa6.8□□□□□ -1.32
PRKDC-208ENST00000536710 BARX1Q9HBU1 254 aaPredicted RBP6.8□□□□□ -1.32
PRKDC-208ENST00000536710 DDX21Q9NR30 783 aaKnown RBP eCLIP6.8□□□□□ -1.32
PRKDC-208ENST00000536710 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.8□□□□□ -1.32
PRKDC-208ENST00000536710 STXBP5LQ9Y2K9 1186 aa6.8□□□□□ -1.32
PRKDC-208ENST00000536710 PTPN22Q9Y2R2 807 aa6.8□□□□□ -1.32
PRKDC-208ENST00000536710 ZDHHC9Q9Y397 364 aa6.8□□□□□ -1.32
PRKDC-208ENST00000536710 PCDHB1Q9Y5F3 818 aa6.8□□□□□ -1.32
PRKDC-208ENST00000536710 COMMD10Q9Y6G5 202 aa6.8□□□□□ -1.32
PRKDC-208ENST00000536710 ANO9A1A5B4 782 aa6.79□□□□□ -1.32
PRKDC-208ENST00000536710 LRRC14BA6NHZ5 514 aa6.79□□□□□ -1.32
PRKDC-208ENST00000536710 RFXAPO00287 272 aa6.79□□□□□ -1.32
PRKDC-208ENST00000536710 MYL3P08590 195 aa6.79□□□□□ -1.32
PRKDC-208ENST00000536710 SARSP49591 514 aaKnown RBP6.79□□□□□ -1.32
PRKDC-208ENST00000536710 MAP2K6P52564 334 aa6.79□□□□□ -1.32
PRKDC-208ENST00000536710 DSC2Q02487 901 aa6.79□□□□□ -1.32
PRKDC-208ENST00000536710 MST1LQ2TV78 715 aa6.79□□□□□ -1.32
PRKDC-208ENST00000536710 KRT40Q6A162 431 aa6.79□□□□□ -1.32
PRKDC-208ENST00000536710 DARS2Q6PI48 645 aaKnown RBP6.79□□□□□ -1.32
PRKDC-208ENST00000536710 Q6ZVL8 140 aa6.79□□□□□ -1.32
PRKDC-208ENST00000536710 CLEC14AQ86T13 490 aa6.79□□□□□ -1.32
PRKDC-208ENST00000536710 SAPCD2Q86UD0 394 aa6.79□□□□□ -1.32
PRKDC-208ENST00000536710 REXO1L1PQ8IX06 675 aa6.79□□□□□ -1.32
PRKDC-208ENST00000536710 PQLC1Q8N2U9 271 aa6.79□□□□□ -1.32
PRKDC-208ENST00000536710 KLHDC4Q8TBB5 520 aa6.79□□□□□ -1.32
PRKDC-208ENST00000536710 MORC4Q8TE76 937 aa6.79□□□□□ -1.32
PRKDC-208ENST00000536710 CDK5RAP3Q96JB5 506 aa6.79□□□□□ -1.32
PRKDC-208ENST00000536710 YTHDC1Q96MU7 727 aaKnown RBP6.79□□□□□ -1.32
PRKDC-208ENST00000536710 C14orf93Q9H972 538 aaKnown RBP6.79□□□□□ -1.32
PRKDC-208ENST00000536710 ARMT1Q9H993 441 aa6.79□□□□□ -1.32
PRKDC-208ENST00000536710 EPB41L4AQ9HCS5 686 aaPredicted RBP6.79□□□□□ -1.32
PRKDC-208ENST00000536710 ING3Q9NXR8 418 aa6.79□□□□□ -1.32
PRKDC-208ENST00000536710 KCTD3Q9Y597 815 aa6.79□□□□□ -1.32
PRKDC-208ENST00000536710 PCDHGB6Q9Y5F9 930 aa6.79□□□□□ -1.32
PRKDC-208ENST00000536710 C2orf78A6NCI8 922 aa6.78□□□□□ -1.32
PRKDC-208ENST00000536710 CAPN8A6NHC0 703 aa6.78□□□□□ -1.32
PRKDC-208ENST00000536710 PQBP1O60828 265 aaKnown RBP6.78□□□□□ -1.32
PRKDC-208ENST00000536710 ZNF888P0CJ79 500 aaPredicted RBP6.78□□□□□ -1.32
PRKDC-208ENST00000536710 IL12RB1P42701 662 aa6.78□□□□□ -1.32
PRKDC-208ENST00000536710 FAM193AP78312 1265 aa6.78□□□□□ -1.32
PRKDC-208ENST00000536710 CDC42EP1Q00587 391 aa6.78□□□□□ -1.32
PRKDC-208ENST00000536710 USP10Q14694 798 aaKnown RBP6.78□□□□□ -1.32
PRKDC-208ENST00000536710 ANO6Q4KMQ2 910 aa6.78□□□□□ -1.32
PRKDC-208ENST00000536710 C19orf54Q5BKX5 351 aa6.78□□□□□ -1.32
PRKDC-208ENST00000536710 GORABQ5T7V8 394 aa6.78□□□□□ -1.32
PRKDC-208ENST00000536710 CYB5RLQ6IPT4 315 aa6.78□□□□□ -1.32
PRKDC-208ENST00000536710 GADL1Q6ZQY3 521 aa6.78□□□□□ -1.32
PRKDC-208ENST00000536710 ADGRG2Q8IZP9 1017 aa6.78□□□□□ -1.32
PRKDC-208ENST00000536710 FBXO41Q8TF61 875 aa6.78□□□□□ -1.32
PRKDC-208ENST00000536710 TMX3Q96JJ7 454 aa6.78□□□□□ -1.32
PRKDC-208ENST00000536710 PDCD2LQ9BRP1 358 aa6.78□□□□□ -1.32
PRKDC-208ENST00000536710 LRFN3Q9BTN0 628 aa6.78□□□□□ -1.32
PRKDC-208ENST00000536710 SENP6Q9GZR1 1112 aaPredicted RBP6.78□□□□□ -1.32
PRKDC-208ENST00000536710 KATNBL1Q9H079 304 aa6.78□□□□□ -1.32
PRKDC-208ENST00000536710 ZNF700Q9H0M5 742 aa6.78□□□□□ -1.32
PRKDC-208ENST00000536710 LDAHQ9H6V9 325 aa6.78□□□□□ -1.32
PRKDC-208ENST00000536710 RIPOR2Q9Y4F9 1068 aa6.78□□□□□ -1.32
PRKDC-208ENST00000536710 A0A1B0GTL3 188 aa6.77□□□□□ -1.33
PRKDC-208ENST00000536710 H3BUI4 141 aa6.77□□□□□ -1.33
PRKDC-208ENST00000536710 SLC16A6O15403 523 aa6.77□□□□□ -1.33
PRKDC-208ENST00000536710 SGTAO43765 313 aa6.77□□□□□ -1.33
PRKDC-208ENST00000536710 TOX4O94842 621 aa6.77□□□□□ -1.33
PRKDC-208ENST00000536710 KIR2DL3P43628 341 aa6.77□□□□□ -1.33
PRKDC-208ENST00000536710 SLC6A9P48067 706 aa6.77□□□□□ -1.33
PRKDC-208ENST00000536710 CACNB3P54284 484 aa6.77□□□□□ -1.33
PRKDC-208ENST00000536710 DUSP2Q05923 314 aa6.77□□□□□ -1.33
PRKDC-208ENST00000536710 DLX2Q07687 328 aaPredicted RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms