RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 PRPF6O94906 941 aaKnown RBP5.6□□□□□ -1.51
SNHG1-201ENST00000535076 APBB3O95704 486 aa5.6□□□□□ -1.51
SNHG1-201ENST00000535076 CAPNS1P04632 268 aa5.6□□□□□ -1.51
SNHG1-201ENST00000535076 ITGB3P05106 788 aa5.6□□□□□ -1.51
SNHG1-201ENST00000535076 MYL3P08590 195 aa5.6□□□□□ -1.51
SNHG1-201ENST00000535076 CLTAP09496 248 aa5.6□□□□□ -1.51
SNHG1-201ENST00000535076 RSPH10BP0C881 870 aa5.6□□□□□ -1.51
SNHG1-201ENST00000535076 NAGAP17050 411 aa5.6□□□□□ -1.51
SNHG1-201ENST00000535076 CALB2P22676 271 aa5.6□□□□□ -1.51
SNHG1-201ENST00000535076 CCND1P24385 295 aa5.6□□□□□ -1.51
SNHG1-201ENST00000535076 HSD3B2P26439 372 aa5.6□□□□□ -1.51
SNHG1-201ENST00000535076 TMOD1P28289 359 aa5.6□□□□□ -1.51
SNHG1-201ENST00000535076 HPDP32754 393 aaPredicted RBP5.6□□□□□ -1.51
SNHG1-201ENST00000535076 TRIM23P36406 574 aa5.6□□□□□ -1.51
SNHG1-201ENST00000535076 GNALP38405 381 aa5.6□□□□□ -1.51
SNHG1-201ENST00000535076 CCT5P48643 541 aa5.6□□□□□ -1.51
SNHG1-201ENST00000535076 IRAK1P51617 712 aa5.6□□□□□ -1.51
SNHG1-201ENST00000535076 HSD17B7P56937 341 aa5.6□□□□□ -1.51
SNHG1-201ENST00000535076 GSDMDP57764 484 aa5.6□□□□□ -1.51
SNHG1-201ENST00000535076 MRPS15P82914 257 aaKnown RBP5.6□□□□□ -1.51
SNHG1-201ENST00000535076 CETN1Q12798 172 aa5.6□□□□□ -1.51
SNHG1-201ENST00000535076 DNAJC3Q13217 504 aa5.6□□□□□ -1.51
SNHG1-201ENST00000535076 ORC1Q13415 861 aa5.6□□□□□ -1.51
SNHG1-201ENST00000535076 LSAMPQ13449 338 aa5.6□□□□□ -1.51
SNHG1-201ENST00000535076 ANKRD1Q15327 319 aa5.6□□□□□ -1.51
SNHG1-201ENST00000535076 EPHA7Q15375 998 aa5.6□□□□□ -1.51
SNHG1-201ENST00000535076 MYLK3Q32MK0 819 aa5.6□□□□□ -1.51
SNHG1-201ENST00000535076 ZCWPW2Q504Y3 356 aa5.6□□□□□ -1.51
SNHG1-201ENST00000535076 FKBP15Q5T1M5 1219 aa5.6□□□□□ -1.51
SNHG1-201ENST00000535076 SYCP2LQ5T4T6 812 aa5.6□□□□□ -1.51
SNHG1-201ENST00000535076 ZNF658Q5TYW1 1059 aaPredicted RBP5.6□□□□□ -1.51
SNHG1-201ENST00000535076 NEK5Q6P3R8 708 aa5.6□□□□□ -1.51
SNHG1-201ENST00000535076 FAM171BQ6P995 826 aa5.6□□□□□ -1.51
SNHG1-201ENST00000535076 ANGPTL8Q6UXH0 198 aa5.6□□□□□ -1.51
SNHG1-201ENST00000535076 PRR23CQ6ZRP0 262 aa5.6□□□□□ -1.51
SNHG1-201ENST00000535076 NLRP10Q86W26 655 aa5.6□□□□□ -1.51
SNHG1-201ENST00000535076 PLA2G4DQ86XP0 818 aa5.6□□□□□ -1.51
SNHG1-201ENST00000535076 CADM3Q8N126 398 aa5.6□□□□□ -1.51
SNHG1-201ENST00000535076 ARMC10Q8N2F6 343 aa5.6□□□□□ -1.51
SNHG1-201ENST00000535076 BBOF1Q8ND07 529 aa5.6□□□□□ -1.51
SNHG1-201ENST00000535076 KIFAP3Q92845 792 aa5.6□□□□□ -1.51
SNHG1-201ENST00000535076 PTPRN2Q92932 1015 aa5.6□□□□□ -1.51
SNHG1-201ENST00000535076 C11orf24Q96F05 449 aaPredicted RBP5.6□□□□□ -1.51
SNHG1-201ENST00000535076 MAELQ96JY0 434 aaKnown RBP5.6□□□□□ -1.51
SNHG1-201ENST00000535076 FGD4Q96M96 766 aa5.6□□□□□ -1.51
SNHG1-201ENST00000535076 MPHOSPH8Q99549 860 aa5.6□□□□□ -1.51
SNHG1-201ENST00000535076 RIOK1Q9BRS2 568 aaKnown RBP5.6□□□□□ -1.51
SNHG1-201ENST00000535076 FUCA2Q9BTY2 467 aa5.6□□□□□ -1.51
SNHG1-201ENST00000535076 ISCA1Q9BUE6 129 aa5.6□□□□□ -1.51
SNHG1-201ENST00000535076 NUP58Q9BVL2 599 aa5.6□□□□□ -1.51
SNHG1-201ENST00000535076 BHLHE41Q9C0J9 482 aaPredicted RBP5.6□□□□□ -1.51
SNHG1-201ENST00000535076 DBNDD1Q9H9R9 158 aa5.6□□□□□ -1.51
SNHG1-201ENST00000535076 SCPEP1Q9HB40 452 aa5.6□□□□□ -1.51
SNHG1-201ENST00000535076 PDE11AQ9HCR9 933 aa5.6□□□□□ -1.51
SNHG1-201ENST00000535076 KCNQ5Q9NR82 932 aa5.6□□□□□ -1.51
SNHG1-201ENST00000535076 SIRT5Q9NXA8 310 aa5.6□□□□□ -1.51
SNHG1-201ENST00000535076 SLC39A1Q9NY26 324 aa5.6□□□□□ -1.51
SNHG1-201ENST00000535076 EURLQ9NYK6 297 aa5.6□□□□□ -1.51
SNHG1-201ENST00000535076 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.6□□□□□ -1.513e-11■□□□□ 8.9
SNHG1-201ENST00000535076 EMC3Q9P0I2 261 aa5.6□□□□□ -1.51
SNHG1-201ENST00000535076 KIF17Q9P2E2 1029 aa5.6□□□□□ -1.51
SNHG1-201ENST00000535076 SNX8Q9Y5X2 465 aa5.6□□□□□ -1.51
SNHG1-201ENST00000535076 SLC4A4Q9Y6R1 1079 aa5.6□□□□□ -1.51
SNHG1-201ENST00000535076 ZNF536O15090 1300 aa5.59□□□□□ -1.51
SNHG1-201ENST00000535076 MYO3BQ8WXR4 1341 aa5.59□□□□□ -1.51
SNHG1-201ENST00000535076 SETD1BQ9UPS6 1966 aaKnown RBP5.59□□□□□ -1.51
SNHG1-201ENST00000535076 A0A088AWK7 358 aa5.59□□□□□ -1.51
SNHG1-201ENST00000535076 CFAP73A6NFT4 308 aa5.59□□□□□ -1.51
SNHG1-201ENST00000535076 CCDC169A6NNP5 214 aa5.59□□□□□ -1.51
SNHG1-201ENST00000535076 FAM47E-STBD1D6RA91 191 aa5.59□□□□□ -1.51
SNHG1-201ENST00000535076 SOX1O00570 391 aaPredicted RBP5.59□□□□□ -1.51
SNHG1-201ENST00000535076 TRDMT1O14717 391 aaKnown RBP5.59□□□□□ -1.51
SNHG1-201ENST00000535076 GPR182O15218 404 aa5.59□□□□□ -1.51
SNHG1-201ENST00000535076 RNF113AO15541 343 aaKnown RBP5.59□□□□□ -1.51
SNHG1-201ENST00000535076 SUPT3HO75486 399 aa5.59□□□□□ -1.51
SNHG1-201ENST00000535076 ANP32DO95626 131 aa5.59□□□□□ -1.51
SNHG1-201ENST00000535076 BAG2O95816 211 aa5.59□□□□□ -1.51
SNHG1-201ENST00000535076 DLGAP3O95886 979 aa5.59□□□□□ -1.51
SNHG1-201ENST00000535076 KRT6AP02538 564 aa5.59□□□□□ -1.51
SNHG1-201ENST00000535076 KRT6BP04259 564 aa5.59□□□□□ -1.51
SNHG1-201ENST00000535076 GSTT2P0CG29 244 aa5.59□□□□□ -1.51
SNHG1-201ENST00000535076 GSTT2BP0CG30 244 aa5.59□□□□□ -1.51
SNHG1-201ENST00000535076 SRGNP10124 158 aa5.59□□□□□ -1.51
SNHG1-201ENST00000535076 CDK4P11802 303 aa5.59□□□□□ -1.51
SNHG1-201ENST00000535076 GLB1P16278 677 aa5.59□□□□□ -1.51
SNHG1-201ENST00000535076 ZNF3P17036 446 aa5.59□□□□□ -1.51
SNHG1-201ENST00000535076 SYN1P17600 705 aa5.59□□□□□ -1.51
SNHG1-201ENST00000535076 PTGS1P23219 599 aa5.59□□□□□ -1.51
SNHG1-201ENST00000535076 CFL1P23528 166 aaKnown RBP5.59□□□□□ -1.51
SNHG1-201ENST00000535076 ANXA13P27216 316 aa5.59□□□□□ -1.51
SNHG1-201ENST00000535076 TKTP29401 623 aaKnown RBP5.59□□□□□ -1.51
SNHG1-201ENST00000535076 HMOX2P30519 316 aa5.59□□□□□ -1.51
SNHG1-201ENST00000535076 PSMC2P35998 433 aaKnown RBP5.59□□□□□ -1.51
SNHG1-201ENST00000535076 STAT6P42226 847 aa5.59□□□□□ -1.51
SNHG1-201ENST00000535076 SSTP61278 116 aa5.59□□□□□ -1.51
SNHG1-201ENST00000535076 S100A12P80511 92 aa5.59□□□□□ -1.51
SNHG1-201ENST00000535076 CAP1Q01518 475 aa5.59□□□□□ -1.51
SNHG1-201ENST00000535076 GALNT1Q10472 559 aaPredicted RBP5.59□□□□□ -1.51
SNHG1-201ENST00000535076 SNW1Q13573 536 aaKnown RBP5.59□□□□□ -1.51
SNHG1-201ENST00000535076 SQLEQ14534 574 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms