RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	RPL11	P62913	178 aa	Known RBP	5.82	□□□□□ -1.48
ECHDC1-223	ENST00000534442	CREB3L3	Q68CJ9	461 aa		5.82	□□□□□ -1.48
ECHDC1-223	ENST00000534442	KRT40	Q6A162	431 aa		5.82	□□□□□ -1.48
ECHDC1-223	ENST00000534442	C17orf99	Q6UX52	265 aa		5.82	□□□□□ -1.48
ECHDC1-223	ENST00000534442	SPATS2	Q86XZ4	545 aa	Known RBP	5.82	□□□□□ -1.48
ECHDC1-223	ENST00000534442	TMEM151A	Q8N4L1	468 aa		5.82	□□□□□ -1.48
ECHDC1-223	ENST00000534442	CHST14	Q8NCH0	376 aa		5.82	□□□□□ -1.48
ECHDC1-223	ENST00000534442	COG1	Q8WTW3	980 aa		5.82	□□□□□ -1.48
ECHDC1-223	ENST00000534442	ASB11	Q8WXH4	323 aa		5.82	□□□□□ -1.48
ECHDC1-223	ENST00000534442	JAM3	Q9BX67	310 aa		5.82	□□□□□ -1.48
ECHDC1-223	ENST00000534442	MUTYH	Q9UIF7	546 aa		5.82	□□□□□ -1.48
ECHDC1-223	ENST00000534442	VAV3	Q9UKW4	847 aa		5.82	□□□□□ -1.48
ECHDC1-223	ENST00000534442	RTL9	Q8NET4	1388 aa		5.81	□□□□□ -1.48
ECHDC1-223	ENST00000534442	FADS2P1	A8MWK0	482 aa		5.81	□□□□□ -1.48
ECHDC1-223	ENST00000534442	NPHS1	O60500	1241 aa		5.81	□□□□□ -1.48
ECHDC1-223	ENST00000534442	FKBP9	O95302	570 aa		5.81	□□□□□ -1.48
ECHDC1-223	ENST00000534442	TGFB1	P01137	390 aa		5.81	□□□□□ -1.48
ECHDC1-223	ENST00000534442	FBLN1	P23142	703 aa		5.81	□□□□□ -1.48
ECHDC1-223	ENST00000534442	TMPRSS15	P98073	1019 aa		5.81	□□□□□ -1.48
ECHDC1-223	ENST00000534442	BNIP3	Q12983	259 aa		5.81	□□□□□ -1.48
ECHDC1-223	ENST00000534442	TTF1	Q15361	905 aa	Predicted RBP	5.81	□□□□□ -1.48
ECHDC1-223	ENST00000534442	MSMP	Q1L6U9	139 aa		5.81	□□□□□ -1.48
ECHDC1-223	ENST00000534442	FAM47C	Q5HY64	1035 aa		5.81	□□□□□ -1.48
ECHDC1-223	ENST00000534442	HLA-DQA1	Q5Y7H0	255 aa		5.81	□□□□□ -1.48
ECHDC1-223	ENST00000534442	FKBP9P1	Q75LS8	142 aa		5.81	□□□□□ -1.48
ECHDC1-223	ENST00000534442	FMNL3	Q8IVF7	1028 aa		5.81	□□□□□ -1.48
ECHDC1-223	ENST00000534442		Q8N1Y9	231 aa		5.81	□□□□□ -1.48
ECHDC1-223	ENST00000534442	CISD2	Q8N5K1	135 aa	Known RBP	5.81	□□□□□ -1.48
ECHDC1-223	ENST00000534442	CHTF18	Q8WVB6	975 aa		5.81	□□□□□ -1.48
ECHDC1-223	ENST00000534442	LINC01599	Q8WXQ3	324 aa		5.81	□□□□□ -1.48
ECHDC1-223	ENST00000534442	OPTN	Q96CV9	577 aa		5.81	□□□□□ -1.48
ECHDC1-223	ENST00000534442	MAP6	Q96JE9	813 aa		5.81	□□□□□ -1.48
ECHDC1-223	ENST00000534442	JMJD8	Q96S16	334 aa		5.81	□□□□□ -1.48
ECHDC1-223	ENST00000534442	KCNJ15	Q99712	375 aa		5.81	□□□□□ -1.48
ECHDC1-223	ENST00000534442	PUS7L	Q9H0K6	701 aa	Known RBP	5.81	□□□□□ -1.48
ECHDC1-223	ENST00000534442	CABP5	Q9NP86	173 aa		5.81	□□□□□ -1.48
ECHDC1-223	ENST00000534442	THG1L	Q9NWX6	298 aa	Known RBP	5.81	□□□□□ -1.48
ECHDC1-223	ENST00000534442	CLDND1	Q9NY35	253 aa		5.81	□□□□□ -1.48
ECHDC1-223	ENST00000534442	APOBEC2	Q9Y235	224 aa	Known RBP	5.81	□□□□□ -1.48
ECHDC1-223	ENST00000534442	SPTA1	P02549	2419 aa		5.8	□□□□□ -1.48
ECHDC1-223	ENST00000534442	RELN	P78509	3460 aa		5.8	□□□□□ -1.48
ECHDC1-223	ENST00000534442	IGF2R	P11717	2491 aa		5.8	□□□□□ -1.48
ECHDC1-223	ENST00000534442	PTPDC1	A2A3K4	754 aa		5.8	□□□□□ -1.48
ECHDC1-223	ENST00000534442	AMY2A	P04746	511 aa		5.8	□□□□□ -1.48
ECHDC1-223	ENST00000534442	PROS1	P07225	676 aa		5.8	□□□□□ -1.48
ECHDC1-223	ENST00000534442	AMY2B	P19961	511 aa		5.8	□□□□□ -1.48
ECHDC1-223	ENST00000534442	FPR2	P25090	351 aa		5.8	□□□□□ -1.48
ECHDC1-223	ENST00000534442	AVPR2	P30518	371 aa		5.8	□□□□□ -1.48
ECHDC1-223	ENST00000534442	LSS	P48449	732 aa		5.8	□□□□□ -1.48
ECHDC1-223	ENST00000534442	GTF2A2	P52657	109 aa		5.8	□□□□□ -1.48
ECHDC1-223	ENST00000534442	ATXN1	P54253	815 aa	Known RBP	5.8	□□□□□ -1.48
ECHDC1-223	ENST00000534442	RTP1	P59025	263 aa		5.8	□□□□□ -1.48
ECHDC1-223	ENST00000534442	ZNF280A	P59817	542 aa	Predicted RBP	5.8	□□□□□ -1.48
ECHDC1-223	ENST00000534442	IL2	P60568	153 aa		5.8	□□□□□ -1.48
ECHDC1-223	ENST00000534442	CRY2	Q49AN0	593 aa		5.8	□□□□□ -1.48
ECHDC1-223	ENST00000534442	HERC4	Q5GLZ8	1057 aa	Predicted RBP	5.8	□□□□□ -1.48
ECHDC1-223	ENST00000534442	DPP8	Q6V1X1	898 aa	Predicted RBP	5.8	□□□□□ -1.48
ECHDC1-223	ENST00000534442	NOL8	Q76FK4	1167 aa	Known RBP	5.8	□□□□□ -1.48
ECHDC1-223	ENST00000534442	CEP68	Q76N32	757 aa		5.8	□□□□□ -1.48
ECHDC1-223	ENST00000534442	SLCO6A1	Q86UG4	719 aa		5.8	□□□□□ -1.48
ECHDC1-223	ENST00000534442	WFDC3	Q8IUB2	231 aa		5.8	□□□□□ -1.48
ECHDC1-223	ENST00000534442	RPGR	Q92834	1020 aa	Known RBP	5.8	□□□□□ -1.48
ECHDC1-223	ENST00000534442	EDA	Q92838	391 aa		5.8	□□□□□ -1.48
ECHDC1-223	ENST00000534442	SPOCK3	Q9BQ16	436 aa		5.8	□□□□□ -1.48
ECHDC1-223	ENST00000534442	MTA3	Q9BTC8	594 aa		5.8	□□□□□ -1.48
ECHDC1-223	ENST00000534442	LSM14B	Q9BX40	385 aa	Known RBP	5.8	□□□□□ -1.48
ECHDC1-223	ENST00000534442	SENP6	Q9GZR1	1112 aa	Predicted RBP	5.8	□□□□□ -1.48
ECHDC1-223	ENST00000534442	TMX4	Q9H1E5	349 aa	Predicted RBP	5.8	□□□□□ -1.48
ECHDC1-223	ENST00000534442	DBNDD1	Q9H9R9	158 aa		5.8	□□□□□ -1.48
ECHDC1-223	ENST00000534442	CARS2	Q9HA77	564 aa	Known RBP	5.8	□□□□□ -1.48
ECHDC1-223	ENST00000534442	SLC28A3	Q9HAS3	691 aa		5.8	□□□□□ -1.48
ECHDC1-223	ENST00000534442	MYOZ2	Q9NPC6	264 aa		5.8	□□□□□ -1.48
ECHDC1-223	ENST00000534442	CATSPERZ	Q9NTU4	200 aa		5.8	□□□□□ -1.48
ECHDC1-223	ENST00000534442	SPTLC3	Q9NUV7	552 aa		5.8	□□□□□ -1.48
ECHDC1-223	ENST00000534442	H2AFY2	Q9P0M6	372 aa	Predicted RBP	5.8	□□□□□ -1.48
ECHDC1-223	ENST00000534442	TNFRSF10D	Q9UBN6	386 aa		5.8	□□□□□ -1.48
ECHDC1-223	ENST00000534442	GULP1	Q9UBP9	304 aa		5.8	□□□□□ -1.48
ECHDC1-223	ENST00000534442	ATP11B	Q9Y2G3	1177 aa		5.8	□□□□□ -1.48
ECHDC1-223	ENST00000534442	ZKSCAN5	Q9Y2L8	839 aa		5.8	□□□□□ -1.48
ECHDC1-223	ENST00000534442	WDFY3	Q8IZQ1	3526 aa		5.79	□□□□□ -1.48
ECHDC1-223	ENST00000534442	TCRBV5S4A2T	A0A5A2	114 aa		5.79	□□□□□ -1.48
ECHDC1-223	ENST00000534442		H7BY64	318 aa		5.79	□□□□□ -1.48
ECHDC1-223	ENST00000534442	ZNF561-AS1	K7EIQ3	104 aa		5.79	□□□□□ -1.48
ECHDC1-223	ENST00000534442	RFXAP	O00287	272 aa		5.79	□□□□□ -1.48
ECHDC1-223	ENST00000534442	GSTA4	O15217	222 aa		5.79	□□□□□ -1.48
ECHDC1-223	ENST00000534442	GAS7	O60861	476 aa		5.79	□□□□□ -1.48
ECHDC1-223	ENST00000534442	PRKD3	O94806	890 aa		5.79	□□□□□ -1.48
ECHDC1-223	ENST00000534442	PDE6A	P16499	860 aa		5.79	□□□□□ -1.48
ECHDC1-223	ENST00000534442	RIPPLY3	P57055	190 aa		5.79	□□□□□ -1.48
ECHDC1-223	ENST00000534442	JAM2	P57087	298 aa		5.79	□□□□□ -1.48
ECHDC1-223	ENST00000534442	MCL1	Q07820	350 aa		5.79	□□□□□ -1.48
ECHDC1-223	ENST00000534442	ITK	Q08881	620 aa		5.79	□□□□□ -1.48
ECHDC1-223	ENST00000534442	IKZF1	Q13422	519 aa		5.79	□□□□□ -1.48
ECHDC1-223	ENST00000534442	SART3	Q15020	963 aa	Known RBP	5.79	□□□□□ -1.48
ECHDC1-223	ENST00000534442	CRY1	Q16526	586 aa		5.79	□□□□□ -1.48
ECHDC1-223	ENST00000534442	OSTM1	Q86WC4	334 aa		5.79	□□□□□ -1.48
ECHDC1-223	ENST00000534442	TEX2	Q8IWB9	1127 aa		5.79	□□□□□ -1.48
ECHDC1-223	ENST00000534442	CNTD1	Q8N815	330 aa		5.79	□□□□□ -1.48
ECHDC1-223	ENST00000534442	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	5.79	□□□□□ -1.48
ECHDC1-223	ENST00000534442	PLEKHO2	Q8TD55	490 aa		5.79	□□□□□ -1.48

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