RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 MAP2K5Q13163 448 aa16.85■□□□□ 0.29
PPFIA1-222ENST00000532504 NCOA4Q13772 614 aa16.85■□□□□ 0.29
PPFIA1-222ENST00000532504 MFSD10Q14728 455 aa16.85■□□□□ 0.29
PPFIA1-222ENST00000532504 ARL13BQ3SXY8 428 aa16.85■□□□□ 0.29
PPFIA1-222ENST00000532504 SPATA2LQ8IUW3 424 aaPredicted RBP16.85■□□□□ 0.29
PPFIA1-222ENST00000532504 CTAGE3PQ8IX95 158 aa16.85■□□□□ 0.29
PPFIA1-222ENST00000532504 IFT20Q8IY31 132 aa16.85■□□□□ 0.29
PPFIA1-222ENST00000532504 GANCQ8TET4 914 aa16.85■□□□□ 0.29
PPFIA1-222ENST00000532504 GOLGA6AQ9NYA3 693 aa16.85■□□□□ 0.29
PPFIA1-222ENST00000532504 PTPN22Q9Y2R2 807 aa16.85■□□□□ 0.29
PPFIA1-222ENST00000532504 ALDH7A1P49419 539 aaKnown RBP16.85■□□□□ 0.29
PPFIA1-222ENST00000532504 SNX1Q13596 522 aa16.85■□□□□ 0.29
PPFIA1-222ENST00000532504 DPH5Q9H2P9 285 aa16.85■□□□□ 0.29
PPFIA1-222ENST00000532504 ERICH4A6NGS2 130 aa16.85■□□□□ 0.29
PPFIA1-222ENST00000532504 MOCS3O95396 460 aa16.85■□□□□ 0.29
PPFIA1-222ENST00000532504 AP3M2P53677 418 aa16.85■□□□□ 0.29
PPFIA1-222ENST00000532504 GJC2Q5T442 439 aaPredicted RBP16.85■□□□□ 0.29
PPFIA1-222ENST00000532504 SH3BP5LQ7L8J4 393 aa16.85■□□□□ 0.29
PPFIA1-222ENST00000532504 PDE11AQ9HCR9 933 aa16.85■□□□□ 0.29
PPFIA1-222ENST00000532504 CEP72Q9P209 647 aa16.85■□□□□ 0.29
PPFIA1-222ENST00000532504 SLC15A5A6NIM6 579 aa16.85■□□□□ 0.29
PPFIA1-222ENST00000532504 TEX33O43247 280 aa16.85■□□□□ 0.29
PPFIA1-222ENST00000532504 FGFR4P22455 802 aa16.85■□□□□ 0.29
PPFIA1-222ENST00000532504 CLUL1Q15846 466 aa16.85■□□□□ 0.29
PPFIA1-222ENST00000532504 GEN1Q17RS7 908 aa16.85■□□□□ 0.29
PPFIA1-222ENST00000532504 CCDC144BQ3MJ40 725 aa16.85■□□□□ 0.29
PPFIA1-222ENST00000532504 YME1L1Q96TA2 773 aa16.85■□□□□ 0.29
PPFIA1-222ENST00000532504 STMN4Q9H169 189 aaPredicted RBP16.85■□□□□ 0.29
PPFIA1-222ENST00000532504 CNOT8Q9UFF9 292 aaKnown RBP16.85■□□□□ 0.29
PPFIA1-222ENST00000532504 CBX1P83916 185 aa16.84■□□□□ 0.29
PPFIA1-222ENST00000532504 PPP1R2P3Q6NXS1 205 aa16.84■□□□□ 0.29
PPFIA1-222ENST00000532504 NFRKBQ6P4R8 1299 aa16.84■□□□□ 0.29
PPFIA1-222ENST00000532504 TNIP3Q96KP6 325 aa16.84■□□□□ 0.29
PPFIA1-222ENST00000532504 TBX20Q9UMR3 447 aa16.84■□□□□ 0.29
PPFIA1-222ENST00000532504 CCDC85CA6NKD9 419 aa16.84■□□□□ 0.29
PPFIA1-222ENST00000532504 PRRG1O14668 218 aa16.84■□□□□ 0.29
PPFIA1-222ENST00000532504 KPNA6O60684 536 aa16.84■□□□□ 0.29
PPFIA1-222ENST00000532504 GHRP10912 638 aa16.84■□□□□ 0.29
PPFIA1-222ENST00000532504 RHOBTB3O94955 611 aa16.84■□□□□ 0.29
PPFIA1-222ENST00000532504 LCP1P13796 627 aa16.84■□□□□ 0.29
PPFIA1-222ENST00000532504 ATP8B4Q8TF62 1192 aa16.84■□□□□ 0.29
PPFIA1-222ENST00000532504 SEPT8Q92599 483 aa16.84■□□□□ 0.29
PPFIA1-222ENST00000532504 GDAP1L1Q96MZ0 367 aa16.84■□□□□ 0.29
PPFIA1-222ENST00000532504 SEPT5Q99719 369 aaPredicted RBP16.84■□□□□ 0.29
PPFIA1-222ENST00000532504 SGK1O00141 431 aa16.84■□□□□ 0.29
PPFIA1-222ENST00000532504 KIAA0391O15091 583 aaKnown RBP16.84■□□□□ 0.29
PPFIA1-222ENST00000532504 OPA1O60313 960 aa16.84■□□□□ 0.29
PPFIA1-222ENST00000532504 STAG3L1P0CL83 205 aa16.84■□□□□ 0.29
PPFIA1-222ENST00000532504 SGO2Q562F6 1265 aa16.84■□□□□ 0.29
PPFIA1-222ENST00000532504 IQSEC1Q6DN90 963 aa16.84■□□□□ 0.29
PPFIA1-222ENST00000532504 FRMD5Q7Z6J6 570 aa16.84■□□□□ 0.29
PPFIA1-222ENST00000532504 SH3TC2Q8TF17 1288 aa16.84■□□□□ 0.29
PPFIA1-222ENST00000532504 TRPC7Q9HCX4 862 aa16.84■□□□□ 0.29
PPFIA1-222ENST00000532504 YBX3P16989 372 aaKnown RBP eCLIP16.83■□□□□ 0.29
PPFIA1-222ENST00000532504 TUBB4BP68371 445 aa16.83■□□□□ 0.29
PPFIA1-222ENST00000532504 TOGARAM2Q6ZUX3 1019 aa16.83■□□□□ 0.29
PPFIA1-222ENST00000532504 ADSSL1Q8N142 457 aa16.83■□□□□ 0.29
PPFIA1-222ENST00000532504 CD99L2Q8TCZ2 262 aa16.83■□□□□ 0.29
PPFIA1-222ENST00000532504 SENP7Q9BQF6 1050 aa16.83■□□□□ 0.29
PPFIA1-222ENST00000532504 SLC38A7Q9NVC3 462 aa16.83■□□□□ 0.29
PPFIA1-222ENST00000532504 GAS2O43903 313 aaKnown RBP16.83■□□□□ 0.29
PPFIA1-222ENST00000532504 CXCR5P32302 372 aa16.83■□□□□ 0.29
PPFIA1-222ENST00000532504 SLC26A2P50443 739 aa16.83■□□□□ 0.29
PPFIA1-222ENST00000532504 PSMC1P62191 440 aaKnown RBP16.83■□□□□ 0.29
PPFIA1-222ENST00000532504 SARNPP82979 210 aaKnown RBP16.83■□□□□ 0.29
PPFIA1-222ENST00000532504 TBC1D31Q96DN5 1066 aa16.83■□□□□ 0.29
PPFIA1-222ENST00000532504 TMEM169Q96HH4 297 aa16.83■□□□□ 0.29
PPFIA1-222ENST00000532504 AGXT2Q9BYV1 514 aa16.83■□□□□ 0.29
PPFIA1-222ENST00000532504 PCDHA13Q9Y5I0 950 aa16.83■□□□□ 0.29
PPFIA1-222ENST00000532504 PSMC6P62333 389 aa16.83■□□□□ 0.28
PPFIA1-222ENST00000532504 SLC35F6Q8N357 371 aa16.83■□□□□ 0.28
PPFIA1-222ENST00000532504 ANAPC7Q9UJX3 599 aa16.83■□□□□ 0.28
PPFIA1-222ENST00000532504 KCPQ6ZWJ8 1503 aa16.83■□□□□ 0.28
PPFIA1-222ENST00000532504 NPTX2P47972 431 aa16.83■□□□□ 0.28
PPFIA1-222ENST00000532504 NME3Q13232 169 aa16.83■□□□□ 0.28
PPFIA1-222ENST00000532504 TUBB2AQ13885 445 aa16.83■□□□□ 0.28
PPFIA1-222ENST00000532504 REPS2Q8NFH8 660 aa16.83■□□□□ 0.28
PPFIA1-222ENST00000532504 TUBB2BQ9BVA1 445 aa16.83■□□□□ 0.28
PPFIA1-222ENST00000532504 RGS17Q9UGC6 210 aaPredicted RBP16.83■□□□□ 0.28
PPFIA1-222ENST00000532504 CYP26A1O43174 497 aa16.83■□□□□ 0.28
PPFIA1-222ENST00000532504 ZC3H11AO75152 810 aaKnown RBP eCLIP16.83■□□□□ 0.28
PPFIA1-222ENST00000532504 PPFIA4O75335 1185 aa16.83■□□□□ 0.28
PPFIA1-222ENST00000532504 NDUFA10O95299 355 aa16.83■□□□□ 0.28
PPFIA1-222ENST00000532504 UBA1P22314 1058 aaKnown RBP16.83■□□□□ 0.28
PPFIA1-222ENST00000532504 PSEN2P49810 448 aa16.83■□□□□ 0.28
PPFIA1-222ENST00000532504 MAD1L1Q9Y6D9 718 aa16.83■□□□□ 0.28
PPFIA1-222ENST00000532504 MFAP3LO75121 409 aa16.82■□□□□ 0.28
PPFIA1-222ENST00000532504 B3GAT3O94766 335 aa16.82■□□□□ 0.28
PPFIA1-222ENST00000532504 PTGISQ16647 500 aa16.82■□□□□ 0.28
PPFIA1-222ENST00000532504 CICQ96RK0 1608 aaPredicted RBP16.82■□□□□ 0.28
PPFIA1-222ENST00000532504 CD4P01730 458 aa16.82■□□□□ 0.28
PPFIA1-222ENST00000532504 FMR1Q06787 632 aaKnown RBP eCLIP16.82■□□□□ 0.285e-9■■■■□ 22.3
PPFIA1-222ENST00000532504 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.82■□□□□ 0.28
PPFIA1-222ENST00000532504 FAM49BQ9NUQ9 324 aa16.82■□□□□ 0.28
PPFIA1-222ENST00000532504 SYNPO2Q9UMS6 1093 aa16.82■□□□□ 0.28
PPFIA1-222ENST00000532504 KRT17Q04695 432 aa16.82■□□□□ 0.28
PPFIA1-222ENST00000532504 PALM2Q8IXS6 379 aa16.82■□□□□ 0.28
PPFIA1-222ENST00000532504 DEFB118Q96PH6 123 aa16.82■□□□□ 0.28
PPFIA1-222ENST00000532504 APBA2Q99767 749 aa16.82■□□□□ 0.28
PPFIA1-222ENST00000532504 PI4K2AQ9BTU6 479 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms