RNA–Protein interactions for RNA: ENST00000522653.5

TCF7-223, Transcript of transcription factor 7, human

TSL 2

Gene TCF7, Length 5,340 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF7-223	ENST00000522653	KIF12	Q96FN5	646 aa		10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	USP44	Q9H0E7	712 aa		10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	POLR3F	Q9H1D9	316 aa	Predicted RBP	10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	KCNF1	Q9H3M0	494 aa		10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	CNOT10	Q9H9A5	744 aa	Known RBP	10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	SLC25A13	Q9UJS0	675 aa		10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	RPTOR	Q8N122	1335 aa		10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	KANSL1L	A0AUZ9	987 aa		10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	CREB3	O43889	395 aa		10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	ATP1A1	P05023	1023 aa	Known RBP	10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	ZBTB17	Q13105	803 aa		10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	NEDD1	Q8NHV4	660 aa		10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	TUFT1	Q9NNX1	390 aa		10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	KCND2	Q9NZV8	630 aa		10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	CLCA2	Q9UQC9	943 aa		10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	CPD	O75976	1380 aa		10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	NVL	O15381	856 aa	Known RBP	10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	TROVE2	P10155	538 aa	Known RBP eCLIP	10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	NR2F2	P24468	414 aa		10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	PPAT	Q06203	517 aa		10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	ARID5B	Q14865	1188 aa		10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	SYTL3	Q4VX76	610 aa		10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	LRRC37B	Q96QE4	947 aa		10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	PASK	Q96RG2	1323 aa		10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	MED15	Q96RN5	788 aa		10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	EPAS1	Q99814	870 aa		10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	ISCA1	Q9BUE6	129 aa		10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	PCDHB9	Q9Y5E1	797 aa		10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	PCDHB6	Q9Y5E3	794 aa		10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	OPHN1	O60890	802 aa		10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	ATF2	P15336	505 aa		10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	PPM1A	P35813	382 aa		10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	OR1G1	P47890	313 aa		10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	GEMIN4	P57678	1058 aa	Known RBP	10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	FKBP3	Q00688	224 aa	Known RBP	10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	PPARD	Q03181	441 aa		10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	DYNC1I2	Q13409	638 aa	Known RBP	10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	SWSAP1	Q6NVH7	229 aa		10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	EMB	Q6PCB8	327 aa		10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	KLHL29	Q96CT2	875 aa		10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	GPRASP2	Q96D09	838 aa		10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	PANX2	Q96RD6	677 aa		10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	LSG1	Q9H089	658 aa	Known RBP	10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	RCOR1	Q9UKL0	485 aa		10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	MAGED2	Q9UNF1	606 aa	Predicted RBP	10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	KCNJ18	B7U540	433 aa		10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	TXNDC9	O14530	226 aa		10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	RPN1	P04843	607 aa	Known RBP	10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	PLA2G4B	P0C869	781 aa		10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	GART	P22102	1010 aa		10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	THPO	P40225	353 aa		10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	POLE2	P56282	527 aa		10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	CENPC	Q03188	943 aa		10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	MAP2K5	Q13163	448 aa		10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	KCNJ12	Q14500	433 aa		10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	INAVA	Q3KP66	663 aa		10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	ANKRD20A3	Q5VUR7	823 aa		10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	GJA10	Q969M2	543 aa		10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	FSD1L	Q9BXM9	530 aa		10.99	□□□□□ -0.65
TCF7-223	ENST00000522653	POLR1A	O95602	1720 aa	Predicted RBP	10.98	□□□□□ -0.65
TCF7-223	ENST00000522653		A8MXQ7	604 aa		10.98	□□□□□ -0.65
TCF7-223	ENST00000522653	COBL	O75128	1261 aa		10.98	□□□□□ -0.65
TCF7-223	ENST00000522653	PRKCB	P05771	671 aa		10.98	□□□□□ -0.65
TCF7-223	ENST00000522653	NPY2R	P49146	381 aa		10.98	□□□□□ -0.65
TCF7-223	ENST00000522653	FKBP1A	P62942	108 aa	Known RBP	10.98	□□□□□ -0.65
TCF7-223	ENST00000522653	CYP27A1	Q02318	531 aa		10.98	□□□□□ -0.65
TCF7-223	ENST00000522653	SF3A3	Q12874	501 aa	Known RBP eCLIP	10.98	□□□□□ -0.65
TCF7-223	ENST00000522653	PADI6	Q6TGC4	694 aa		10.98	□□□□□ -0.65
TCF7-223	ENST00000522653	TMC7	Q7Z402	723 aa		10.98	□□□□□ -0.65
TCF7-223	ENST00000522653	LCORL	Q8N3X6	602 aa		10.98	□□□□□ -0.65
TCF7-223	ENST00000522653	SNX19	Q92543	992 aa		10.98	□□□□□ -0.65
TCF7-223	ENST00000522653	BATF3	Q9NR55	127 aa		10.98	□□□□□ -0.65
TCF7-223	ENST00000522653	OLA1	Q9NTK5	396 aa	Known RBP	10.98	□□□□□ -0.65
TCF7-223	ENST00000522653	SNX2	O60749	519 aa		10.98	□□□□□ -0.65
TCF7-223	ENST00000522653	TADA3	O75528	432 aa		10.98	□□□□□ -0.65
TCF7-223	ENST00000522653	IFNB1	P01574	187 aa		10.98	□□□□□ -0.65
TCF7-223	ENST00000522653	OSTN	P61366	133 aa		10.98	□□□□□ -0.65
TCF7-223	ENST00000522653	SKP1	P63208	163 aa		10.98	□□□□□ -0.65
TCF7-223	ENST00000522653	PDE1B	Q01064	536 aa		10.98	□□□□□ -0.65
TCF7-223	ENST00000522653	GUCY2D	Q02846	1103 aa		10.98	□□□□□ -0.65
TCF7-223	ENST00000522653	TAF2	Q6P1X5	1199 aa		10.98	□□□□□ -0.65
TCF7-223	ENST00000522653	RRAGA	Q7L523	313 aa		10.98	□□□□□ -0.65
TCF7-223	ENST00000522653	ZNF438	Q7Z4V0	828 aa		10.98	□□□□□ -0.65
TCF7-223	ENST00000522653	HERC6	Q8IVU3	1022 aa		10.98	□□□□□ -0.65
TCF7-223	ENST00000522653	FBXO22	Q8NEZ5	403 aa		10.98	□□□□□ -0.65
TCF7-223	ENST00000522653	USP27X	A6NNY8	438 aa		10.98	□□□□□ -0.65
TCF7-223	ENST00000522653	TRPA1	O75762	1119 aa		10.98	□□□□□ -0.65
TCF7-223	ENST00000522653	TTC4	O95801	387 aa		10.98	□□□□□ -0.65
TCF7-223	ENST00000522653	ADCY8	P40145	1251 aa		10.98	□□□□□ -0.65
TCF7-223	ENST00000522653	DUOXA2	Q1HG44	320 aa		10.98	□□□□□ -0.65
TCF7-223	ENST00000522653	CCDC144B	Q3MJ40	725 aa		10.98	□□□□□ -0.65
TCF7-223	ENST00000522653	GSDMA	Q96QA5	445 aa		10.98	□□□□□ -0.65
TCF7-223	ENST00000522653	VTA1	Q9NP79	307 aa		10.98	□□□□□ -0.65
TCF7-223	ENST00000522653	GDA	Q9Y2T3	454 aa		10.98	□□□□□ -0.65
TCF7-223	ENST00000522653	NDUFS2	O75306	463 aa		10.98	□□□□□ -0.65
TCF7-223	ENST00000522653	EEF1G	P26641	437 aa	Known RBP	10.98	□□□□□ -0.65
TCF7-223	ENST00000522653	SDC4	P31431	198 aa		10.98	□□□□□ -0.65
TCF7-223	ENST00000522653	CASP14	P31944	242 aa		10.98	□□□□□ -0.65
TCF7-223	ENST00000522653	GRM4	Q14833	912 aa		10.98	□□□□□ -0.65
TCF7-223	ENST00000522653	PDIA6	Q15084	440 aa		10.98	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms