RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 POMCP01189 267 aa16.25■□□□□ 0.19
SCARNA20.5-201ENST00000516991 SOD2P04179 222 aa16.25■□□□□ 0.19
SCARNA20.5-201ENST00000516991 CNPP09543 421 aaKnown RBP16.25■□□□□ 0.19
SCARNA20.5-201ENST00000516991 WEE2P0C1S8 567 aa16.25■□□□□ 0.19
SCARNA20.5-201ENST00000516991 CLCN4P51793 760 aa16.25■□□□□ 0.19
SCARNA20.5-201ENST00000516991 AK2P54819 239 aa16.25■□□□□ 0.19
SCARNA20.5-201ENST00000516991 NR5A1Q13285 461 aa16.25■□□□□ 0.19
SCARNA20.5-201ENST00000516991 CALCRLQ16602 461 aa16.25■□□□□ 0.19
SCARNA20.5-201ENST00000516991 EARS2Q5JPH6 523 aaKnown RBP16.25■□□□□ 0.19
SCARNA20.5-201ENST00000516991 TMC5Q6UXY8 1006 aa16.25■□□□□ 0.19
SCARNA20.5-201ENST00000516991 C15orf39Q6ZRI6 1047 aa16.25■□□□□ 0.19
SCARNA20.5-201ENST00000516991 OTOP3Q7RTS5 596 aa16.25■□□□□ 0.19
SCARNA20.5-201ENST00000516991 GPR149Q86SP6 731 aa16.25■□□□□ 0.19
SCARNA20.5-201ENST00000516991 KLHL5Q96PQ7 755 aa16.25■□□□□ 0.19
SCARNA20.5-201ENST00000516991 NFKBIZQ9BYH8 718 aa16.25■□□□□ 0.19
SCARNA20.5-201ENST00000516991 CSRNP2Q9H175 543 aa16.25■□□□□ 0.19
SCARNA20.5-201ENST00000516991 XPNPEP1Q9NQW7 623 aa16.25■□□□□ 0.19
SCARNA20.5-201ENST00000516991 PCDHA12Q9UN75 941 aa16.25■□□□□ 0.19
SCARNA20.5-201ENST00000516991 IPPQ9Y573 584 aa16.25■□□□□ 0.19
SCARNA20.5-201ENST00000516991 TDRD15B5MCY1 1934 aaKnown RBP16.25■□□□□ 0.19
SCARNA20.5-201ENST00000516991 FAM205CA6NFA0 338 aa16.24■□□□□ 0.19
SCARNA20.5-201ENST00000516991 INO80B-WBP1J3KQ70 363 aa16.24■□□□□ 0.19
SCARNA20.5-201ENST00000516991 NEMFO60524 1076 aa16.24■□□□□ 0.19
SCARNA20.5-201ENST00000516991 NR1I2O75469 434 aa16.24■□□□□ 0.19
SCARNA20.5-201ENST00000516991 SLITRK3O94933 977 aa16.24■□□□□ 0.19
SCARNA20.5-201ENST00000516991 SSBP05455 408 aaKnown RBP eCLIP16.24■□□□□ 0.19
SCARNA20.5-201ENST00000516991 NEFLP07196 543 aa16.24■□□□□ 0.19
SCARNA20.5-201ENST00000516991 ADH1AP07327 375 aa16.24■□□□□ 0.19
SCARNA20.5-201ENST00000516991 AFF1P51825 1210 aaKnown RBP16.24■□□□□ 0.19
SCARNA20.5-201ENST00000516991 TRIM29Q14134 588 aa16.24■□□□□ 0.19
SCARNA20.5-201ENST00000516991 CYP26C1Q6V0L0 522 aa16.24■□□□□ 0.19
SCARNA20.5-201ENST00000516991 SMG8Q8ND04 991 aaKnown RBP16.24■□□□□ 0.19
SCARNA20.5-201ENST00000516991 GTF3C6Q969F1 213 aa16.24■□□□□ 0.19
SCARNA20.5-201ENST00000516991 TRIM6Q9C030 488 aaPredicted RBP16.24■□□□□ 0.19
SCARNA20.5-201ENST00000516991 PRG3Q9Y2Y8 225 aaPredicted RBP16.24■□□□□ 0.19
SCARNA20.5-201ENST00000516991 ARL5CA6NH57 179 aa16.23■□□□□ 0.19
SCARNA20.5-201ENST00000516991 EIF5BO60841 1220 aaKnown RBP16.23■□□□□ 0.19
SCARNA20.5-201ENST00000516991 LILRB3O75022 631 aa16.23■□□□□ 0.19
SCARNA20.5-201ENST00000516991 MLH1P40692 756 aa16.23■□□□□ 0.19
SCARNA20.5-201ENST00000516991 OR1G1P47890 313 aa16.23■□□□□ 0.19
SCARNA20.5-201ENST00000516991 GLUD2P49448 558 aa16.23■□□□□ 0.19
SCARNA20.5-201ENST00000516991 MBTD1Q05BQ5 628 aa16.23■□□□□ 0.19
SCARNA20.5-201ENST00000516991 DSC1Q08554 894 aa16.23■□□□□ 0.19
SCARNA20.5-201ENST00000516991 CAPSQ13938 189 aa16.23■□□□□ 0.19
SCARNA20.5-201ENST00000516991 COLGALT2Q8IYK4 626 aa16.23■□□□□ 0.19
SCARNA20.5-201ENST00000516991 CMASQ8NFW8 434 aaPredicted RBP16.23■□□□□ 0.19
SCARNA20.5-201ENST00000516991 RPS6KC1Q96S38 1066 aa16.23■□□□□ 0.19
SCARNA20.5-201ENST00000516991 HSD17B14Q9BPX1 270 aa16.23■□□□□ 0.19
SCARNA20.5-201ENST00000516991 EIF2AQ9BY44 585 aaKnown RBP16.23■□□□□ 0.19
SCARNA20.5-201ENST00000516991 RHOBTB2Q9BYZ6 727 aa16.23■□□□□ 0.19
SCARNA20.5-201ENST00000516991 TTC12Q9H892 705 aaPredicted RBP16.23■□□□□ 0.19
SCARNA20.5-201ENST00000516991 MARCH5Q9NX47 278 aa16.23■□□□□ 0.19
SCARNA20.5-201ENST00000516991 LIMD1Q9UGP4 676 aa16.23■□□□□ 0.19
SCARNA20.5-201ENST00000516991 GIT1Q9Y2X7 761 aa16.23■□□□□ 0.19
SCARNA20.5-201ENST00000516991 C2orf16Q68DN1 1984 aa16.23■□□□□ 0.19
SCARNA20.5-201ENST00000516991 ZBTB39O15060 712 aa16.22■□□□□ 0.19
SCARNA20.5-201ENST00000516991 GALR2O43603 387 aaPredicted RBP16.22■□□□□ 0.19
SCARNA20.5-201ENST00000516991 PDGFBP01127 241 aaPredicted RBP16.22■□□□□ 0.19
SCARNA20.5-201ENST00000516991 ASGR2P07307 311 aa16.22■□□□□ 0.19
SCARNA20.5-201ENST00000516991 FDPSP14324 419 aaKnown RBP16.22■□□□□ 0.19
SCARNA20.5-201ENST00000516991 ARL2P36404 184 aa16.22■□□□□ 0.19
SCARNA20.5-201ENST00000516991 RARRES1P49788 294 aa16.22■□□□□ 0.19
SCARNA20.5-201ENST00000516991 KANK3Q6NY19 840 aa16.22■□□□□ 0.19
SCARNA20.5-201ENST00000516991 DIS3L2Q8IYB7 885 aaKnown RBP16.22■□□□□ 0.19
SCARNA20.5-201ENST00000516991 GPR65Q8IYL9 337 aa16.22■□□□□ 0.19
SCARNA20.5-201ENST00000516991 RNF168Q8IYW5 571 aaPredicted RBP16.22■□□□□ 0.19
SCARNA20.5-201ENST00000516991 ASAP3Q8TDY4 903 aa16.22■□□□□ 0.19
SCARNA20.5-201ENST00000516991 CPB2Q96IY4 423 aa16.22■□□□□ 0.19
SCARNA20.5-201ENST00000516991 GAD1Q99259 594 aa16.22■□□□□ 0.19
SCARNA20.5-201ENST00000516991 PHOX2BQ99453 314 aa16.22■□□□□ 0.19
SCARNA20.5-201ENST00000516991 MAN1C1Q9NR34 630 aa16.22■□□□□ 0.19
SCARNA20.5-201ENST00000516991 GLUD1P00367 558 aa16.21■□□□□ 0.19
SCARNA20.5-201ENST00000516991 C1RP00736 705 aa16.21■□□□□ 0.19
SCARNA20.5-201ENST00000516991 XRCC6P12956 609 aaKnown RBP eCLIP16.21■□□□□ 0.19
SCARNA20.5-201ENST00000516991 ARF4P18085 180 aaPredicted RBP16.21■□□□□ 0.19
SCARNA20.5-201ENST00000516991 SCNN1GP51170 649 aa16.21■□□□□ 0.19
SCARNA20.5-201ENST00000516991 AMHR2Q16671 573 aa16.21■□□□□ 0.19
SCARNA20.5-201ENST00000516991 SLC27A1Q6PCB7 646 aa16.21■□□□□ 0.19
SCARNA20.5-201ENST00000516991 NECAB1Q8N987 351 aa16.21■□□□□ 0.19
SCARNA20.5-201ENST00000516991 NSUN7Q8NE18 718 aaKnown RBP16.21■□□□□ 0.19
SCARNA20.5-201ENST00000516991 ATOH1Q92858 354 aaPredicted RBP16.21■□□□□ 0.19
SCARNA20.5-201ENST00000516991 COLEC11Q9BWP8 271 aa16.21■□□□□ 0.19
SCARNA20.5-201ENST00000516991 MFSD1Q9H3U5 465 aa16.21■□□□□ 0.19
SCARNA20.5-201ENST00000516991 NXF3Q9H4D5 531 aaKnown RBP16.21■□□□□ 0.19
SCARNA20.5-201ENST00000516991 RXFP1Q9HBX9 757 aa16.21■□□□□ 0.19
SCARNA20.5-201ENST00000516991 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.21■□□□□ 0.19
SCARNA20.5-201ENST00000516991 PLXNA3P51805 1871 aa16.2■□□□□ 0.18
SCARNA20.5-201ENST00000516991 C2CD2LO14523 706 aa16.2■□□□□ 0.18
SCARNA20.5-201ENST00000516991 TEX28O15482 410 aa16.2■□□□□ 0.18
SCARNA20.5-201ENST00000516991 ST18O60284 1047 aa16.2■□□□□ 0.18
SCARNA20.5-201ENST00000516991 EFEMP2O95967 443 aa16.2■□□□□ 0.18
SCARNA20.5-201ENST00000516991 GLRA2P23416 452 aa16.2■□□□□ 0.18
SCARNA20.5-201ENST00000516991 TXKP42681 527 aa16.2■□□□□ 0.18
SCARNA20.5-201ENST00000516991 DSG1Q02413 1049 aa16.2■□□□□ 0.18
SCARNA20.5-201ENST00000516991 CREMQ03060 361 aa16.2■□□□□ 0.18
SCARNA20.5-201ENST00000516991 GRIK3Q13003 919 aa16.2■□□□□ 0.18
SCARNA20.5-201ENST00000516991 ME3Q16798 604 aa16.2■□□□□ 0.18
SCARNA20.5-201ENST00000516991 ASTLQ6HA08 431 aaPredicted RBP16.2■□□□□ 0.18
SCARNA20.5-201ENST00000516991 MCPH1Q8NEM0 835 aa16.2■□□□□ 0.18
SCARNA20.5-201ENST00000516991 HDAC7Q8WUI4 952 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms