RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 MICAL2O94851 1124 aa3.87□□□□□ -1.79
SCARNA13-201ENST00000516672 HOXD12P35452 270 aa3.87□□□□□ -1.79
SCARNA13-201ENST00000516672 CLCN1P35523 988 aa3.87□□□□□ -1.79
SCARNA13-201ENST00000516672 BTDP43251 543 aa3.87□□□□□ -1.79
SCARNA13-201ENST00000516672 PSEN2P49810 448 aa3.87□□□□□ -1.79
SCARNA13-201ENST00000516672 ERVPABLB-1P60509 514 aa3.87□□□□□ -1.79
SCARNA13-201ENST00000516672 KCNAB2Q13303 367 aa3.87□□□□□ -1.79
SCARNA13-201ENST00000516672 ADAM9Q13443 819 aa3.87□□□□□ -1.79
SCARNA13-201ENST00000516672 GIT2Q14161 759 aa3.87□□□□□ -1.79
SCARNA13-201ENST00000516672 GRM4Q14833 912 aa3.87□□□□□ -1.79
SCARNA13-201ENST00000516672 KIAA1755Q5JYT7 1200 aa3.87□□□□□ -1.79
SCARNA13-201ENST00000516672 GPR158Q5T848 1215 aa3.87□□□□□ -1.79
SCARNA13-201ENST00000516672 LPCAT2Q7L5N7 544 aa3.87□□□□□ -1.79
SCARNA13-201ENST00000516672 VPS52Q8N1B4 723 aa3.87□□□□□ -1.79
SCARNA13-201ENST00000516672 SYNPOQ8N3V7 929 aa3.87□□□□□ -1.79
SCARNA13-201ENST00000516672 EFCAB3Q8N7B9 438 aa3.87□□□□□ -1.79
SCARNA13-201ENST00000516672 REPS2Q8NFH8 660 aa3.87□□□□□ -1.79
SCARNA13-201ENST00000516672 COPS5Q92905 334 aa3.87□□□□□ -1.79
SCARNA13-201ENST00000516672 ZFRQ96KR1 1074 aaKnown RBP3.87□□□□□ -1.79
SCARNA13-201ENST00000516672 C5orf34Q96MH7 638 aa3.87□□□□□ -1.79
SCARNA13-201ENST00000516672 CCNL2Q96S94 520 aaPredicted RBP3.87□□□□□ -1.79
SCARNA13-201ENST00000516672 PLA2G12BQ9BX93 195 aa3.87□□□□□ -1.79
SCARNA13-201ENST00000516672 SLC12A9Q9BXP2 914 aa3.87□□□□□ -1.79
SCARNA13-201ENST00000516672 ZNF334Q9HCZ1 680 aaPredicted RBP3.87□□□□□ -1.79
SCARNA13-201ENST00000516672 ZNF71Q9NQZ8 489 aaPredicted RBP3.87□□□□□ -1.79
SCARNA13-201ENST00000516672 CNNM1Q9NRU3 951 aa3.87□□□□□ -1.79
SCARNA13-201ENST00000516672 SPG21Q9NZD8 308 aa3.87□□□□□ -1.79
SCARNA13-201ENST00000516672 GMIPQ9P107 970 aa3.87□□□□□ -1.79
SCARNA13-201ENST00000516672 EBF1Q9UH73 591 aa3.87□□□□□ -1.79
SCARNA13-201ENST00000516672 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.87□□□□□ -1.79
SCARNA13-201ENST00000516672 BTBD3Q9Y2F9 522 aa3.87□□□□□ -1.79
SCARNA13-201ENST00000516672 PI4KAP42356 2102 aa3.86□□□□□ -1.79
SCARNA13-201ENST00000516672 HELZP42694 1942 aaKnown RBP3.86□□□□□ -1.79
SCARNA13-201ENST00000516672 LOC100653049A0A140TA62 436 aa3.86□□□□□ -1.79
SCARNA13-201ENST00000516672 KRTAP9-6A0A140TA67 174 aa3.86□□□□□ -1.79
SCARNA13-201ENST00000516672 FLRT2O43155 660 aa3.86□□□□□ -1.79
SCARNA13-201ENST00000516672 ATG13O75143 517 aa3.86□□□□□ -1.79
SCARNA13-201ENST00000516672 KRT34O76011 436 aa3.86□□□□□ -1.79
SCARNA13-201ENST00000516672 APBB3O95704 486 aa3.86□□□□□ -1.79
SCARNA13-201ENST00000516672 MPOP05164 745 aa3.86□□□□□ -1.79
SCARNA13-201ENST00000516672 LDHBP07195 334 aaKnown RBP3.86□□□□□ -1.79
SCARNA13-201ENST00000516672 SNRPB2P08579 225 aaKnown RBP3.86□□□□□ -1.79
SCARNA13-201ENST00000516672 SCG2P13521 617 aa3.86□□□□□ -1.79
SCARNA13-201ENST00000516672 PPP2R1AP30153 589 aa3.86□□□□□ -1.79
SCARNA13-201ENST00000516672 CDR1P51861 262 aa3.86□□□□□ -1.79
SCARNA13-201ENST00000516672 ATP8B2P98198 1209 aa3.86□□□□□ -1.79
SCARNA13-201ENST00000516672 DDX10Q13206 875 aaKnown RBP3.86□□□□□ -1.79
SCARNA13-201ENST00000516672 LPIN1Q14693 890 aa3.86□□□□□ -1.79
SCARNA13-201ENST00000516672 MFSD10Q14728 455 aa3.86□□□□□ -1.79
SCARNA13-201ENST00000516672 C14orf28Q4W4Y0 310 aa3.86□□□□□ -1.79
SCARNA13-201ENST00000516672 CAVIN4Q5BKX8 364 aa3.86□□□□□ -1.79
SCARNA13-201ENST00000516672 PHF19Q5T6S3 580 aa3.86□□□□□ -1.79
SCARNA13-201ENST00000516672 FAM102BQ5T8I3 360 aa3.86□□□□□ -1.79
SCARNA13-201ENST00000516672 RABEPKQ7Z6M1 372 aa3.86□□□□□ -1.79
SCARNA13-201ENST00000516672 IRF7Q92985 503 aa3.86□□□□□ -1.79
SCARNA13-201ENST00000516672 LCORQ96JN0 433 aaPredicted RBP3.86□□□□□ -1.79
SCARNA13-201ENST00000516672 CFAP53Q96M91 514 aa3.86□□□□□ -1.79
SCARNA13-201ENST00000516672 HEXIM2Q96MH2 286 aaKnown RBP3.86□□□□□ -1.79
SCARNA13-201ENST00000516672 TEX13BQ9BXU2 312 aa3.86□□□□□ -1.79
SCARNA13-201ENST00000516672 PNNQ9H307 717 aaKnown RBP3.86□□□□□ -1.79
SCARNA13-201ENST00000516672 IL21RQ9HBE5 538 aa3.86□□□□□ -1.79
SCARNA13-201ENST00000516672 STK17AQ9UEE5 414 aa3.86□□□□□ -1.79
SCARNA13-201ENST00000516672 NUDCQ9Y266 331 aa3.86□□□□□ -1.79
SCARNA13-201ENST00000516672 PCDHB15Q9Y5E8 787 aa3.86□□□□□ -1.79
SCARNA13-201ENST00000516672 A0A1W2PRG0 241 aa3.85□□□□□ -1.79
SCARNA13-201ENST00000516672 CAND2O75155 1236 aa3.85□□□□□ -1.79
SCARNA13-201ENST00000516672 GJB6O95452 261 aa3.85□□□□□ -1.79
SCARNA13-201ENST00000516672 CTSAP10619 480 aa3.85□□□□□ -1.79
SCARNA13-201ENST00000516672 BPIP17213 487 aa3.85□□□□□ -1.79
SCARNA13-201ENST00000516672 GLDCP23378 1020 aa3.85□□□□□ -1.79
SCARNA13-201ENST00000516672 ADSLP30566 484 aaPredicted RBP3.85□□□□□ -1.79
SCARNA13-201ENST00000516672 NTHL1P78549 312 aa3.85□□□□□ -1.79
SCARNA13-201ENST00000516672 GOLGA2Q08379 1002 aa3.85□□□□□ -1.79
SCARNA13-201ENST00000516672 CLN3Q13286 438 aa3.85□□□□□ -1.79
SCARNA13-201ENST00000516672 MRPL49Q13405 166 aaKnown RBP3.85□□□□□ -1.79
SCARNA13-201ENST00000516672 POLA2Q14181 598 aa3.85□□□□□ -1.79
SCARNA13-201ENST00000516672 PON2Q15165 354 aa3.85□□□□□ -1.79
SCARNA13-201ENST00000516672 KIAA0753Q2KHM9 967 aa3.85□□□□□ -1.79
SCARNA13-201ENST00000516672 FAM26DQ5JW98 314 aa3.85□□□□□ -1.79
SCARNA13-201ENST00000516672 CC2D1BQ5T0F9 858 aaKnown RBP3.85□□□□□ -1.79
SCARNA13-201ENST00000516672 TANGO2Q6ICL3 276 aa3.85□□□□□ -1.79
SCARNA13-201ENST00000516672 TXNDC11Q6PKC3 985 aa3.85□□□□□ -1.79
SCARNA13-201ENST00000516672 LDHAL6AQ6ZMR3 332 aa3.85□□□□□ -1.79
SCARNA13-201ENST00000516672 FOXP4Q8IVH2 680 aaPredicted RBP3.85□□□□□ -1.79
SCARNA13-201ENST00000516672 MAP4K3Q8IVH8 894 aa3.85□□□□□ -1.79
SCARNA13-201ENST00000516672 LSMEM2Q8N112 164 aa3.85□□□□□ -1.79
SCARNA13-201ENST00000516672 SLC39A11Q8N1S5 342 aa3.85□□□□□ -1.79
SCARNA13-201ENST00000516672 DNAJB8Q8NHS0 232 aa3.85□□□□□ -1.79
SCARNA13-201ENST00000516672 FAM163AQ96GL9 167 aaPredicted RBP3.85□□□□□ -1.79
SCARNA13-201ENST00000516672 MMS19Q96T76 1030 aa3.85□□□□□ -1.79
SCARNA13-201ENST00000516672 NUP88Q99567 741 aaPredicted RBP3.85□□□□□ -1.79
SCARNA13-201ENST00000516672 FUCA2Q9BTY2 467 aa3.85□□□□□ -1.79
SCARNA13-201ENST00000516672 METTL22Q9BUU2 404 aaPredicted RBP3.85□□□□□ -1.79
SCARNA13-201ENST00000516672 TRMT61BQ9BVS5 477 aaKnown RBP3.85□□□□□ -1.79
SCARNA13-201ENST00000516672 TRIM8Q9BZR9 551 aa3.85□□□□□ -1.79
SCARNA13-201ENST00000516672 NT5C3AQ9H0P0 336 aa3.85□□□□□ -1.79
SCARNA13-201ENST00000516672 PRKRIP1Q9H875 184 aaPredicted RBP3.85□□□□□ -1.79
SCARNA13-201ENST00000516672 EHMT1Q9H9B1 1298 aa3.85□□□□□ -1.79
SCARNA13-201ENST00000516672 TRPV5Q9NQA5 729 aa3.85□□□□□ -1.79
SCARNA13-201ENST00000516672 TM7SF3Q9NS93 570 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms