RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 B4GALT3O60512 393 aa6.48□□□□□ -1.37
RNF4-217ENST00000511892 DGAT1O75907 488 aa6.48□□□□□ -1.37
RNF4-217ENST00000511892 HSP90AA1P07900 732 aaKnown RBP6.48□□□□□ -1.37
RNF4-217ENST00000511892 XRCC6P12956 609 aaKnown RBP eCLIP6.48□□□□□ -1.37
RNF4-217ENST00000511892 GLRA2P23416 452 aa6.48□□□□□ -1.37
RNF4-217ENST00000511892 U2AF2P26368 475 aaKnown RBP eCLIP6.48□□□□□ -1.376e-8■□□□□ 9.9
RNF4-217ENST00000511892 DDIT3P35638 169 aa6.48□□□□□ -1.37
RNF4-217ENST00000511892 TECP42680 631 aa6.48□□□□□ -1.37
RNF4-217ENST00000511892 NRIP1P48552 1158 aa6.48□□□□□ -1.37
RNF4-217ENST00000511892 RARRES1P49788 294 aa6.48□□□□□ -1.37
RNF4-217ENST00000511892 TOB1P50616 345 aaPredicted RBP6.48□□□□□ -1.37
RNF4-217ENST00000511892 AFF1P51825 1210 aaKnown RBP6.48□□□□□ -1.37
RNF4-217ENST00000511892 BCAR1P56945 870 aa6.48□□□□□ -1.37
RNF4-217ENST00000511892 PTENP60484 403 aa6.48□□□□□ -1.37
RNF4-217ENST00000511892 HMGN5P82970 282 aaKnown RBP6.48□□□□□ -1.37
RNF4-217ENST00000511892 RBM10P98175 930 aaKnown RBP6.48□□□□□ -1.37
RNF4-217ENST00000511892 MBTD1Q05BQ5 628 aa6.48□□□□□ -1.37
RNF4-217ENST00000511892 KCNC3Q14003 757 aa6.48□□□□□ -1.37
RNF4-217ENST00000511892 SMAD2Q15796 467 aaKnown RBP6.48□□□□□ -1.37
RNF4-217ENST00000511892 ECM1Q16610 540 aa6.48□□□□□ -1.37
RNF4-217ENST00000511892 CSPP1Q1MSJ5 1256 aa6.48□□□□□ -1.37
RNF4-217ENST00000511892 PUS10Q3MIT2 529 aaKnown RBP6.48□□□□□ -1.37
RNF4-217ENST00000511892 TTC38Q5R3I4 469 aa6.48□□□□□ -1.37
RNF4-217ENST00000511892 PLPP4Q5VZY2 271 aa6.48□□□□□ -1.37
RNF4-217ENST00000511892 AGMOQ6ZNB7 445 aa6.48□□□□□ -1.37
RNF4-217ENST00000511892 MRPL10Q7Z7H8 261 aaKnown RBP6.48□□□□□ -1.37
RNF4-217ENST00000511892 TMEM173Q86WV6 379 aaPredicted RBP6.48□□□□□ -1.37
RNF4-217ENST00000511892 NOSTRINQ8IVI9 506 aa6.48□□□□□ -1.37
RNF4-217ENST00000511892 EXOC8Q8IYI6 725 aa6.48□□□□□ -1.37
RNF4-217ENST00000511892 ABI1Q8IZP0 508 aa6.48□□□□□ -1.37
RNF4-217ENST00000511892 SLC39A11Q8N1S5 342 aa6.48□□□□□ -1.37
RNF4-217ENST00000511892 LRRC43Q8N309 656 aa6.48□□□□□ -1.37
RNF4-217ENST00000511892 RNF149Q8NC42 400 aa6.48□□□□□ -1.37
RNF4-217ENST00000511892 MRPS27Q92552 414 aaKnown RBP6.48□□□□□ -1.37
RNF4-217ENST00000511892 ZNF516Q92618 1163 aa6.48□□□□□ -1.37
RNF4-217ENST00000511892 ZNF558Q96NG5 402 aa6.48□□□□□ -1.37
RNF4-217ENST00000511892 POLR3CQ9BUI4 534 aaPredicted RBP6.48□□□□□ -1.37
RNF4-217ENST00000511892 NRDE2Q9H7Z3 1164 aa6.48□□□□□ -1.37
RNF4-217ENST00000511892 TLE6Q9H808 572 aa6.48□□□□□ -1.37
RNF4-217ENST00000511892 TUFT1Q9NNX1 390 aa6.48□□□□□ -1.37
RNF4-217ENST00000511892 TBC1D13Q9NVG8 400 aa6.48□□□□□ -1.37
RNF4-217ENST00000511892 PCDHB2Q9Y5E7 798 aa6.48□□□□□ -1.37
RNF4-217ENST00000511892 ZNF318Q5VUA4 2279 aa6.48□□□□□ -1.37
RNF4-217ENST00000511892 HIDE1A8MVS5 230 aa6.47□□□□□ -1.37
RNF4-217ENST00000511892 NT5C1B-RDH14C9J2C7 533 aa6.47□□□□□ -1.37
RNF4-217ENST00000511892 PI4K2BG5E9Z4 385 aa6.47□□□□□ -1.37
RNF4-217ENST00000511892 TSPAN1O60635 241 aa6.47□□□□□ -1.37
RNF4-217ENST00000511892 EYA4O95677 639 aa6.47□□□□□ -1.37
RNF4-217ENST00000511892 OR52Z1P0C646 297 aa6.47□□□□□ -1.37
RNF4-217ENST00000511892 SKIP12755 728 aa6.47□□□□□ -1.37
RNF4-217ENST00000511892 NCLP19338 710 aaKnown RBP6.47□□□□□ -1.37
RNF4-217ENST00000511892 RPA1P27694 616 aa6.47□□□□□ -1.37
RNF4-217ENST00000511892 NDUFV1P49821 464 aa6.47□□□□□ -1.37
RNF4-217ENST00000511892 RAB27AP51159 221 aa6.47□□□□□ -1.37
RNF4-217ENST00000511892 NUCB2P80303 420 aa6.47□□□□□ -1.37
RNF4-217ENST00000511892 ZP2Q05996 745 aa6.47□□□□□ -1.37
RNF4-217ENST00000511892 POU5F1BQ06416 359 aa6.47□□□□□ -1.37
RNF4-217ENST00000511892 COASYQ13057 564 aa6.47□□□□□ -1.37
RNF4-217ENST00000511892 ORC2Q13416 577 aaPredicted RBP6.47□□□□□ -1.37
RNF4-217ENST00000511892 SMAD4Q13485 552 aaKnown RBP6.47□□□□□ -1.37
RNF4-217ENST00000511892 CAPSQ13938 189 aa6.47□□□□□ -1.37
RNF4-217ENST00000511892 MXD4Q14582 209 aaPredicted RBP6.47□□□□□ -1.37
RNF4-217ENST00000511892 NFKBIBQ15653 356 aa6.47□□□□□ -1.37
RNF4-217ENST00000511892 IL17AQ16552 155 aa6.47□□□□□ -1.37
RNF4-217ENST00000511892 AMHR2Q16671 573 aa6.47□□□□□ -1.37
RNF4-217ENST00000511892 DUSP6Q16828 381 aa6.47□□□□□ -1.37
RNF4-217ENST00000511892 NOMO2Q5JPE7 1267 aa6.47□□□□□ -1.37
RNF4-217ENST00000511892 ZNF280BQ86YH2 543 aa6.47□□□□□ -1.37
RNF4-217ENST00000511892 GJD3Q8N144 294 aa6.47□□□□□ -1.37
RNF4-217ENST00000511892 FAM184AQ8NB25 1140 aa6.47□□□□□ -1.37
RNF4-217ENST00000511892 SMRP1Q8NCR6 262 aa6.47□□□□□ -1.37
RNF4-217ENST00000511892 SMG8Q8ND04 991 aaKnown RBP6.47□□□□□ -1.37
RNF4-217ENST00000511892 MICAL1Q8TDZ2 1067 aa6.47□□□□□ -1.37
RNF4-217ENST00000511892 BCL7CQ8WUZ0 217 aaPredicted RBP6.47□□□□□ -1.37
RNF4-217ENST00000511892 INTS4Q96HW7 963 aaKnown RBP6.47□□□□□ -1.37
RNF4-217ENST00000511892 CPB2Q96IY4 423 aa6.47□□□□□ -1.37
RNF4-217ENST00000511892 TCF25Q9BQ70 676 aa6.47□□□□□ -1.37
RNF4-217ENST00000511892 EIF2AQ9BY44 585 aaKnown RBP6.47□□□□□ -1.37
RNF4-217ENST00000511892 MRPL9Q9BYD2 267 aaKnown RBP6.47□□□□□ -1.37
RNF4-217ENST00000511892 POLR3FQ9H1D9 316 aaPredicted RBP6.47□□□□□ -1.37
RNF4-217ENST00000511892 C11orf16Q9NQ32 467 aa6.47□□□□□ -1.37
RNF4-217ENST00000511892 GPRC5CQ9NQ84 441 aa6.47□□□□□ -1.37
RNF4-217ENST00000511892 SPG21Q9NZD8 308 aa6.47□□□□□ -1.37
RNF4-217ENST00000511892 DNAJB4Q9UDY4 337 aa6.47□□□□□ -1.37
RNF4-217ENST00000511892 RAPGEFL1Q9UHV5 662 aa6.47□□□□□ -1.37
RNF4-217ENST00000511892 CD207Q9UJ71 328 aa6.47□□□□□ -1.37
RNF4-217ENST00000511892 DBR1Q9UK59 544 aaKnown RBP6.47□□□□□ -1.37
RNF4-217ENST00000511892 BARX2Q9UMQ3 279 aaPredicted RBP6.47□□□□□ -1.37
RNF4-217ENST00000511892 INPP5FQ9Y2H2 1132 aa6.47□□□□□ -1.37
RNF4-217ENST00000511892 PCDHB6Q9Y5E3 794 aa6.47□□□□□ -1.37
RNF4-217ENST00000511892 USP34Q70CQ2 3546 aa6.47□□□□□ -1.37
RNF4-217ENST00000511892 MUC6Q6W4X9 2439 aa6.47□□□□□ -1.37
RNF4-217ENST00000511892 ANK1P16157 1881 aa6.47□□□□□ -1.37
RNF4-217ENST00000511892 DOCK8Q8NF50 2099 aa6.46□□□□□ -1.37
RNF4-217ENST00000511892 C2orf71A6NGG8 1288 aa6.46□□□□□ -1.38
RNF4-217ENST00000511892 B4GALT5O43286 388 aa6.46□□□□□ -1.38
RNF4-217ENST00000511892 USO1O60763 962 aaKnown RBP6.46□□□□□ -1.38
RNF4-217ENST00000511892 ZC3H11AO75152 810 aaKnown RBP eCLIP6.46□□□□□ -1.38
RNF4-217ENST00000511892 DDHD2O94830 711 aa6.46□□□□□ -1.38
RNF4-217ENST00000511892 GALTP07902 379 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms