RNA–Protein interactions for RNA: ENST00000509431.1

HMGCR-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 421 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-208ENST00000509431 MARCH5Q9NX47 278 aa15.4■□□□□ 0.06
HMGCR-208ENST00000509431 SEC63Q9UGP8 760 aaKnown RBP15.4■□□□□ 0.06
HMGCR-208ENST00000509431 KCNH3Q9ULD8 1083 aa15.4■□□□□ 0.06
HMGCR-208ENST00000509431 PCDHA6Q9UN73 950 aa15.4■□□□□ 0.06
HMGCR-208ENST00000509431 PCDHA8Q9Y5H6 950 aa15.4■□□□□ 0.06
HMGCR-208ENST00000509431 NAV2Q8IVL1 2488 aa15.39■□□□□ 0.05
HMGCR-208ENST00000509431 EIF4E1BA6NMX2 242 aaKnown RBP15.39■□□□□ 0.05
HMGCR-208ENST00000509431 MEIS3P2A8K0S8 358 aa15.39■□□□□ 0.05
HMGCR-208ENST00000509431 XYLBO75191 536 aa15.39■□□□□ 0.05
HMGCR-208ENST00000509431 CCNE2O96020 404 aa15.39■□□□□ 0.05
HMGCR-208ENST00000509431 SFPQP23246 707 aaKnown RBP eCLIP15.39■□□□□ 0.05
HMGCR-208ENST00000509431 HOXA6P31267 233 aa15.39■□□□□ 0.05
HMGCR-208ENST00000509431 IMMTQ16891 758 aaKnown RBP15.39■□□□□ 0.05
HMGCR-208ENST00000509431 PLA2G2CQ5R387 149 aa15.39■□□□□ 0.05
HMGCR-208ENST00000509431 DAB2IPQ5VWQ8 1189 aa15.39■□□□□ 0.05
HMGCR-208ENST00000509431 PDZD3Q86UT5 571 aa15.39■□□□□ 0.05
HMGCR-208ENST00000509431 WDR5BQ86VZ2 330 aa15.39■□□□□ 0.05
HMGCR-208ENST00000509431 FAM3CQ92520 227 aa15.39■□□□□ 0.05
HMGCR-208ENST00000509431 FAM167AQ96KS9 214 aa15.39■□□□□ 0.05
HMGCR-208ENST00000509431 CHST7Q9NS84 486 aa15.39■□□□□ 0.05
HMGCR-208ENST00000509431 NEUROG3Q9Y4Z2 214 aa15.39■□□□□ 0.05
HMGCR-208ENST00000509431 MAFBQ9Y5Q3 323 aaPredicted RBP15.39■□□□□ 0.05
HMGCR-208ENST00000509431 NBEAQ8NFP9 2946 aa15.39■□□□□ 0.05
HMGCR-208ENST00000509431 CNTNAP2Q9UHC6 1331 aa15.39■□□□□ 0.05
HMGCR-208ENST00000509431 POU2F2P09086 479 aa15.38■□□□□ 0.05
HMGCR-208ENST00000509431 CEACAM1P13688 526 aa15.38■□□□□ 0.05
HMGCR-208ENST00000509431 NCLP19338 710 aaKnown RBP15.38■□□□□ 0.05
HMGCR-208ENST00000509431 NTHL1P78549 312 aa15.38■□□□□ 0.05
HMGCR-208ENST00000509431 TROAPQ12815 778 aa15.38■□□□□ 0.05
HMGCR-208ENST00000509431 CEP55Q53EZ4 464 aa15.38■□□□□ 0.05
HMGCR-208ENST00000509431 LIN9Q5TKA1 542 aa15.38■□□□□ 0.05
HMGCR-208ENST00000509431 NPAS3Q8IXF0 933 aa15.38■□□□□ 0.05
HMGCR-208ENST00000509431 LRRC71Q8N4P6 559 aa15.38■□□□□ 0.05
HMGCR-208ENST00000509431 ITFG1Q8TB96 612 aa15.38■□□□□ 0.05
HMGCR-208ENST00000509431 ZNF668Q96K58 619 aaPredicted RBP15.38■□□□□ 0.05
HMGCR-208ENST00000509431 INO80BQ9C086 356 aaPredicted RBP15.38■□□□□ 0.05
HMGCR-208ENST00000509431 RSAD1Q9HA92 442 aa15.38■□□□□ 0.05
HMGCR-208ENST00000509431 VPS45Q9NRW7 570 aa15.38■□□□□ 0.05
HMGCR-208ENST00000509431 FBXW11Q9UKB1 542 aa15.38■□□□□ 0.05
HMGCR-208ENST00000509431 PIN4Q9Y237 131 aaKnown RBP15.38■□□□□ 0.05
HMGCR-208ENST00000509431 PRG3Q9Y2Y8 225 aaPredicted RBP15.38■□□□□ 0.05
HMGCR-208ENST00000509431 DMXL2Q8TDJ6 3036 aa15.38■□□□□ 0.05
HMGCR-208ENST00000509431 K7ESF4 209 aa15.37■□□□□ 0.05
HMGCR-208ENST00000509431 GIPC1O14908 333 aa15.37■□□□□ 0.05
HMGCR-208ENST00000509431 SMARCA1P28370 1054 aa15.37■□□□□ 0.05
HMGCR-208ENST00000509431 RAP1GAPP47736 663 aa15.37■□□□□ 0.05
HMGCR-208ENST00000509431 CCDC6Q16204 474 aa15.37■□□□□ 0.05
HMGCR-208ENST00000509431 UBE2SQ16763 222 aa15.37■□□□□ 0.05
HMGCR-208ENST00000509431 PPM1LQ5SGD2 360 aa15.37■□□□□ 0.05
HMGCR-208ENST00000509431 AGMOQ6ZNB7 445 aa15.37■□□□□ 0.05
HMGCR-208ENST00000509431 CACNA2D4Q7Z3S7 1137 aa15.37■□□□□ 0.05
HMGCR-208ENST00000509431 ELSPBP1Q96BH3 223 aa15.37■□□□□ 0.05
HMGCR-208ENST00000509431 TRPV5Q9NQA5 729 aa15.37■□□□□ 0.05
HMGCR-208ENST00000509431 GDE1Q9NZC3 331 aa15.37■□□□□ 0.05
HMGCR-208ENST00000509431 SALL3Q9BXA9 1300 aa15.37■□□□□ 0.05
HMGCR-208ENST00000509431 ERICH2A1L162 156 aa15.36■□□□□ 0.05
HMGCR-208ENST00000509431 DDX39AO00148 427 aaKnown RBP15.36■□□□□ 0.05
HMGCR-208ENST00000509431 NR1I2O75469 434 aa15.36■□□□□ 0.05
HMGCR-208ENST00000509431 CHRNB1P11230 501 aa15.36■□□□□ 0.05
HMGCR-208ENST00000509431 CSRP1P21291 193 aaKnown RBP15.36■□□□□ 0.05
HMGCR-208ENST00000509431 OR1G1P47890 313 aa15.36■□□□□ 0.05
HMGCR-208ENST00000509431 LRRC32Q14392 662 aa15.36■□□□□ 0.05
HMGCR-208ENST00000509431 USP41Q3LFD5 358 aa15.36■□□□□ 0.05
HMGCR-208ENST00000509431 SH3PXD2AQ5TCZ1 1133 aa15.36■□□□□ 0.05
HMGCR-208ENST00000509431 HEATR6Q6AI08 1181 aaKnown RBP15.36■□□□□ 0.05
HMGCR-208ENST00000509431 COLGALT2Q8IYK4 626 aa15.36■□□□□ 0.05
HMGCR-208ENST00000509431 IRF7Q92985 503 aa15.36■□□□□ 0.05
HMGCR-208ENST00000509431 BRD9Q9H8M2 597 aa15.36■□□□□ 0.05
HMGCR-208ENST00000509431 MSRB2Q9Y3D2 182 aa15.36■□□□□ 0.05
HMGCR-208ENST00000509431 GPSM3Q9Y4H4 160 aa15.36■□□□□ 0.05
HMGCR-208ENST00000509431 WDR81Q562E7 1941 aa15.36■□□□□ 0.05
HMGCR-208ENST00000509431 NOTCH4Q99466 2003 aa15.36■□□□□ 0.05
HMGCR-208ENST00000509431 MEIS1O00470 390 aa15.35■□□□□ 0.05
HMGCR-208ENST00000509431 CSDE1O75534 798 aaKnown RBP15.35■□□□□ 0.05
HMGCR-208ENST00000509431 TOP3BO95985 862 aaKnown RBP15.35■□□□□ 0.05
HMGCR-208ENST00000509431 MPLP40238 635 aa15.35■□□□□ 0.05
HMGCR-208ENST00000509431 PTGDRQ13258 359 aa15.35■□□□□ 0.05
HMGCR-208ENST00000509431 C1orf228Q6PIY5 440 aa15.35■□□□□ 0.05
HMGCR-208ENST00000509431 NIPA1Q7RTP0 329 aa15.35■□□□□ 0.05
HMGCR-208ENST00000509431 MRPL10Q7Z7H8 261 aaKnown RBP15.35■□□□□ 0.05
HMGCR-208ENST00000509431 GLYCTKQ8IVS8 523 aa15.35■□□□□ 0.05
HMGCR-208ENST00000509431 TEX2Q8IWB9 1127 aa15.35■□□□□ 0.05
HMGCR-208ENST00000509431 GAB3Q8WWW8 586 aa15.35■□□□□ 0.05
HMGCR-208ENST00000509431 EDEM2Q9BV94 578 aa15.35■□□□□ 0.05
HMGCR-208ENST00000509431 PLA2G2FQ9BZM2 168 aa15.35■□□□□ 0.05
HMGCR-208ENST00000509431 UBN1Q9NPG3 1134 aa15.35■□□□□ 0.05
HMGCR-208ENST00000509431 POLIQ9UNA4 740 aa15.35■□□□□ 0.05
HMGCR-208ENST00000509431 PCDHB2Q9Y5E7 798 aa15.35■□□□□ 0.05
HMGCR-208ENST00000509431 POMCP01189 267 aa15.34■□□□□ 0.05
HMGCR-208ENST00000509431 C8AP07357 584 aa15.34■□□□□ 0.05
HMGCR-208ENST00000509431 PSAPP07602 524 aa15.34■□□□□ 0.05
HMGCR-208ENST00000509431 GAS6Q14393 721 aa15.34■□□□□ 0.05
HMGCR-208ENST00000509431 PABPC1LQ4VXU2 614 aaKnown RBP15.34■□□□□ 0.05
HMGCR-208ENST00000509431 CYB5R4Q7L1T6 521 aa15.34■□□□□ 0.05
HMGCR-208ENST00000509431 TRMT1LQ7Z2T5 733 aaKnown RBP15.34■□□□□ 0.05
HMGCR-208ENST00000509431 CATIPQ7Z7H3 387 aa15.34■□□□□ 0.05
HMGCR-208ENST00000509431 PROSER1Q86XN7 944 aa15.34■□□□□ 0.05
HMGCR-208ENST00000509431 SMAP1Q8IYB5 467 aaPredicted RBP15.34■□□□□ 0.05
HMGCR-208ENST00000509431 MSANTD3Q96H12 275 aa15.34■□□□□ 0.05
HMGCR-208ENST00000509431 MAP3K14Q99558 947 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms