RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 ELL2O00472 640 aaPredicted RBP4.44□□□□□ -1.7
UBE2D3-226ENST00000508635 GSTA4O15217 222 aa4.44□□□□□ -1.7
UBE2D3-226ENST00000508635 SUV39H1O43463 412 aa4.44□□□□□ -1.7
UBE2D3-226ENST00000508635 BBOX1O75936 387 aa4.44□□□□□ -1.7
UBE2D3-226ENST00000508635 LRG1P02750 347 aa4.44□□□□□ -1.7
UBE2D3-226ENST00000508635 IGFALSP35858 605 aa4.44□□□□□ -1.7
UBE2D3-226ENST00000508635 IARSP41252 1262 aaKnown RBP4.44□□□□□ -1.7
UBE2D3-226ENST00000508635 AFF3P51826 1226 aaKnown RBP4.44□□□□□ -1.7
UBE2D3-226ENST00000508635 NKX3-2P78367 333 aa4.44□□□□□ -1.7
UBE2D3-226ENST00000508635 SDE2Q6IQ49 451 aa4.44□□□□□ -1.7
UBE2D3-226ENST00000508635 CYP4F22Q6NT55 531 aa4.44□□□□□ -1.7
UBE2D3-226ENST00000508635 CNNM4Q6P4Q7 775 aa4.44□□□□□ -1.7
UBE2D3-226ENST00000508635 TEPPQ6URK8 271 aa4.44□□□□□ -1.7
UBE2D3-226ENST00000508635 KCTD1Q719H9 257 aa4.44□□□□□ -1.7
UBE2D3-226ENST00000508635 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.44□□□□□ -1.7
UBE2D3-226ENST00000508635 ZC3H18Q86VM9 953 aaKnown RBP4.44□□□□□ -1.7
UBE2D3-226ENST00000508635 TRIM48Q8IWZ4 208 aa4.44□□□□□ -1.7
UBE2D3-226ENST00000508635 ADGRG2Q8IZP9 1017 aa4.44□□□□□ -1.7
UBE2D3-226ENST00000508635 ZBTB8AQ96BR9 441 aa4.44□□□□□ -1.7
UBE2D3-226ENST00000508635 GORASP1Q9BQQ3 440 aa4.44□□□□□ -1.7
UBE2D3-226ENST00000508635 ISCA1Q9BUE6 129 aa4.44□□□□□ -1.7
UBE2D3-226ENST00000508635 SMURF1Q9HCE7 757 aa4.44□□□□□ -1.7
UBE2D3-226ENST00000508635 RIC8BQ9NVN3 520 aa4.44□□□□□ -1.7
UBE2D3-226ENST00000508635 HYPKQ9NX55 129 aa4.44□□□□□ -1.7
UBE2D3-226ENST00000508635 SAMD15Q9P1V8 674 aa4.44□□□□□ -1.7
UBE2D3-226ENST00000508635 TRMT112Q9UI30 125 aaKnown RBP4.44□□□□□ -1.7
UBE2D3-226ENST00000508635 SRPK3Q9UPE1 567 aa4.44□□□□□ -1.7
UBE2D3-226ENST00000508635 ATP6V0A2Q9Y487 856 aa4.44□□□□□ -1.7
UBE2D3-226ENST00000508635 NUB1Q9Y5A7 615 aa4.44□□□□□ -1.7
UBE2D3-226ENST00000508635 ABCC4O15439 1325 aa4.44□□□□□ -1.7
UBE2D3-226ENST00000508635 ZNF541Q9H0D2 1346 aa4.44□□□□□ -1.7
UBE2D3-226ENST00000508635 COL4A5P29400 1685 aa4.43□□□□□ -1.7
UBE2D3-226ENST00000508635 A0A1B0GTL3 188 aa4.43□□□□□ -1.7
UBE2D3-226ENST00000508635 ZNF561-AS1K7EIQ3 104 aa4.43□□□□□ -1.7
UBE2D3-226ENST00000508635 M0R2C6 588 aa4.43□□□□□ -1.7
UBE2D3-226ENST00000508635 MAN2B1O00754 1011 aa4.43□□□□□ -1.7
UBE2D3-226ENST00000508635 TCERG1O14776 1098 aaKnown RBP4.43□□□□□ -1.7
UBE2D3-226ENST00000508635 RFPL3O75679 317 aa4.43□□□□□ -1.7
UBE2D3-226ENST00000508635 ASLP04424 464 aa4.43□□□□□ -1.7
UBE2D3-226ENST00000508635 JMJD7P0C870 316 aa4.43□□□□□ -1.7
UBE2D3-226ENST00000508635 HTRA3P83110 453 aa4.43□□□□□ -1.7
UBE2D3-226ENST00000508635 GRAPQ13588 217 aa4.43□□□□□ -1.7
UBE2D3-226ENST00000508635 SF3B3Q15393 1217 aaKnown RBP4.43□□□□□ -1.7
UBE2D3-226ENST00000508635 PAN2Q504Q3 1202 aaKnown RBP4.43□□□□□ -1.7
UBE2D3-226ENST00000508635 TMEM177Q53S58 311 aa4.43□□□□□ -1.7
UBE2D3-226ENST00000508635 PHF19Q5T6S3 580 aa4.43□□□□□ -1.7
UBE2D3-226ENST00000508635 PIK3R6Q5UE93 754 aa4.43□□□□□ -1.7
UBE2D3-226ENST00000508635 BTBD8Q5XKL5 378 aa4.43□□□□□ -1.7
UBE2D3-226ENST00000508635 CPZQ66K79 652 aa4.43□□□□□ -1.7
UBE2D3-226ENST00000508635 FSTL4Q6MZW2 842 aa4.43□□□□□ -1.7
UBE2D3-226ENST00000508635 ZCCHC8Q6NZY4 707 aaKnown RBP4.43□□□□□ -1.7
UBE2D3-226ENST00000508635 TMC5Q6UXY8 1006 aa4.43□□□□□ -1.7
UBE2D3-226ENST00000508635 OVCH1Q7RTY7 1134 aa4.43□□□□□ -1.7
UBE2D3-226ENST00000508635 DDX53Q86TM3 631 aaKnown RBP4.43□□□□□ -1.7
UBE2D3-226ENST00000508635 WDR63Q8IWG1 891 aa4.43□□□□□ -1.7
UBE2D3-226ENST00000508635 SP8Q8IXZ3 490 aa4.43□□□□□ -1.7
UBE2D3-226ENST00000508635 GPC2Q8N158 579 aa4.43□□□□□ -1.7
UBE2D3-226ENST00000508635 SYNPOQ8N3V7 929 aa4.43□□□□□ -1.7
UBE2D3-226ENST00000508635 TSPYL6Q8N831 410 aa4.43□□□□□ -1.7
UBE2D3-226ENST00000508635 C2orf69Q8N8R5 385 aa4.43□□□□□ -1.7
UBE2D3-226ENST00000508635 GRAPLQ8TC17 118 aaPredicted RBP4.43□□□□□ -1.7
UBE2D3-226ENST00000508635 FNIP1Q8TF40 1166 aa4.43□□□□□ -1.7
UBE2D3-226ENST00000508635 JDP2Q8WYK2 163 aa4.43□□□□□ -1.7
UBE2D3-226ENST00000508635 DACT3Q96B18 629 aaPredicted RBP4.43□□□□□ -1.7
UBE2D3-226ENST00000508635 FAM89AQ96GI7 184 aa4.43□□□□□ -1.7
UBE2D3-226ENST00000508635 ZSWIM3Q96MP5 696 aa4.43□□□□□ -1.7
UBE2D3-226ENST00000508635 RTFDC1Q9BY42 306 aaPredicted RBP4.43□□□□□ -1.7
UBE2D3-226ENST00000508635 CELF4Q9BZC1 486 aaKnown RBP4.43□□□□□ -1.7
UBE2D3-226ENST00000508635 TAF1DQ9H5J8 278 aaPredicted RBP4.43□□□□□ -1.7
UBE2D3-226ENST00000508635 ATP23Q9Y6H3 246 aa4.43□□□□□ -1.7
UBE2D3-226ENST00000508635 DICER1Q9UPY3 1922 aaKnown RBP4.42□□□□□ -1.7
UBE2D3-226ENST00000508635 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.42□□□□□ -1.7
UBE2D3-226ENST00000508635 FAM90A27PA6NNH2 459 aa4.42□□□□□ -1.7
UBE2D3-226ENST00000508635 ACOT7O00154 380 aa4.42□□□□□ -1.7
UBE2D3-226ENST00000508635 SCDO00767 359 aa4.42□□□□□ -1.7
UBE2D3-226ENST00000508635 ENPP3O14638 875 aa4.42□□□□□ -1.7
UBE2D3-226ENST00000508635 KPNA6O60684 536 aa4.42□□□□□ -1.7
UBE2D3-226ENST00000508635 GLRX3O76003 335 aaKnown RBP4.42□□□□□ -1.7
UBE2D3-226ENST00000508635 KRT37O76014 449 aa4.42□□□□□ -1.7
UBE2D3-226ENST00000508635 FAHP16930 419 aa4.42□□□□□ -1.7
UBE2D3-226ENST00000508635 PTPN1P18031 435 aaKnown RBP4.42□□□□□ -1.7
UBE2D3-226ENST00000508635 NEK4P51957 841 aa4.42□□□□□ -1.7
UBE2D3-226ENST00000508635 ITGA1P56199 1179 aa4.42□□□□□ -1.7
UBE2D3-226ENST00000508635 LACTBP83111 547 aaPredicted RBP4.42□□□□□ -1.7
UBE2D3-226ENST00000508635 CACNA1SQ13698 1873 aa4.42□□□□□ -1.7
UBE2D3-226ENST00000508635 CCDC88AQ3V6T2 1871 aa4.42□□□□□ -1.7
UBE2D3-226ENST00000508635 CFAP100Q494V2 611 aa4.42□□□□□ -1.7
UBE2D3-226ENST00000508635 CCDC30Q5VVM6 783 aa4.42□□□□□ -1.7
UBE2D3-226ENST00000508635 ERICH6BQ5W0A0 696 aa4.42□□□□□ -1.7
UBE2D3-226ENST00000508635 CDCA2Q69YH5 1023 aaPredicted RBP4.42□□□□□ -1.7
UBE2D3-226ENST00000508635 DPP8Q6V1X1 898 aaPredicted RBP4.42□□□□□ -1.7
UBE2D3-226ENST00000508635 UBE2R2Q712K3 238 aaPredicted RBP4.42□□□□□ -1.7
UBE2D3-226ENST00000508635 DDX46Q7L014 1031 aaKnown RBP4.42□□□□□ -1.7
UBE2D3-226ENST00000508635 NIM1KQ8IY84 436 aa4.42□□□□□ -1.7
UBE2D3-226ENST00000508635 NLGN4XQ8N0W4 816 aa4.42□□□□□ -1.7
UBE2D3-226ENST00000508635 SUPT20HQ8NEM7 779 aa4.42□□□□□ -1.7
UBE2D3-226ENST00000508635 CELF1Q92879 486 aaKnown RBP4.42□□□□□ -1.7
UBE2D3-226ENST00000508635 NINJ1Q92982 152 aa4.42□□□□□ -1.7
UBE2D3-226ENST00000508635 TSR2Q969E8 191 aaKnown RBP4.42□□□□□ -1.7
UBE2D3-226ENST00000508635 FEZ1Q99689 392 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms