RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 CASTP20810 708 aaKnown RBP5.56□□□□□ -1.52
CDH9-203ENST00000505045 CES1P23141 567 aa5.56□□□□□ -1.52
CDH9-203ENST00000505045 SMARCA1P28370 1054 aa5.56□□□□□ -1.52
CDH9-203ENST00000505045 ICAM3P32942 547 aa5.56□□□□□ -1.52
CDH9-203ENST00000505045 CD68P34810 354 aaPredicted RBP5.56□□□□□ -1.52
CDH9-203ENST00000505045 IRAK1P51617 712 aa5.56□□□□□ -1.52
CDH9-203ENST00000505045 PTPN11Q06124 597 aaPredicted RBP5.56□□□□□ -1.52
CDH9-203ENST00000505045 RBL2Q08999 1139 aa5.56□□□□□ -1.52
CDH9-203ENST00000505045 ZNF618Q5T7W0 954 aa5.56□□□□□ -1.52
CDH9-203ENST00000505045 KRT40Q6A162 431 aa5.56□□□□□ -1.52
CDH9-203ENST00000505045 TXNDC11Q6PKC3 985 aa5.56□□□□□ -1.52
CDH9-203ENST00000505045 METTL7BQ6UX53 244 aa5.56□□□□□ -1.52
CDH9-203ENST00000505045 Q6ZUG5 572 aa5.56□□□□□ -1.52
CDH9-203ENST00000505045 LRRC8DQ7L1W4 858 aa5.56□□□□□ -1.52
CDH9-203ENST00000505045 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.56□□□□□ -1.52
CDH9-203ENST00000505045 GJD3Q8N144 294 aa5.56□□□□□ -1.52
CDH9-203ENST00000505045 TMEM102Q8N9M5 508 aaPredicted RBP5.56□□□□□ -1.52
CDH9-203ENST00000505045 BRF1Q92994 677 aa5.56□□□□□ -1.52
CDH9-203ENST00000505045 UIMC1Q96RL1 719 aa5.56□□□□□ -1.52
CDH9-203ENST00000505045 PSTPIP2Q9H939 334 aa5.56□□□□□ -1.52
CDH9-203ENST00000505045 SOX13Q9UN79 622 aa5.56□□□□□ -1.52
CDH9-203ENST00000505045 MYH9P35579 1960 aaKnown RBP5.56□□□□□ -1.52
CDH9-203ENST00000505045 TCF20Q9UGU0 1960 aaKnown RBP5.56□□□□□ -1.52
CDH9-203ENST00000505045 H3BRB1 525 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 RFXAPO00287 272 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 EREGO14944 169 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 TREHO43280 583 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 ADAM11O75078 769 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 CTSHP09668 335 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 CALM1P0DP23 149 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 CALM2P0DP24 149 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 CALM3P0DP25 149 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 TGFB3P10600 412 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 ATP2A2P16615 1042 aaKnown RBP5.55□□□□□ -1.52
CDH9-203ENST00000505045 MARK3P27448 753 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 TCF7P36402 384 aaPredicted RBP5.55□□□□□ -1.52
CDH9-203ENST00000505045 GNAQP50148 359 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 NAPAP54920 295 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 WDR5P61964 334 aaKnown RBP5.55□□□□□ -1.52
CDH9-203ENST00000505045 PKN1Q16512 942 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 GNPTABQ3T906 1256 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 C8orf34Q49A92 452 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 UTP14CQ5TAP6 766 aaKnown RBP5.55□□□□□ -1.52
CDH9-203ENST00000505045 SERINC5Q86VE9 423 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 AGGF1Q8N302 714 aaeCLIP5.55□□□□□ -1.52
CDH9-203ENST00000505045 SAMD3Q8N6K7 520 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 C7orf31Q8N865 590 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 KLHL23Q8NBE8 558 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 AFAP1L1Q8TED9 768 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 LMBR1Q8WVP7 490 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 PHKBQ93100 1093 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 HHIPQ96QV1 700 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 UBL7Q96S82 380 aaPredicted RBP5.55□□□□□ -1.52
CDH9-203ENST00000505045 LZTS2Q9BRK4 669 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 KATNAL1Q9BW62 490 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 SEZ6LQ9BYH1 1024 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 RNPEPQ9H4A4 650 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 TUT1Q9H6E5 874 aaKnown RBP5.55□□□□□ -1.52
CDH9-203ENST00000505045 CERS4Q9HA82 394 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 MLXIPQ9HAP2 919 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 NCOA5Q9HCD5 579 aaKnown RBP5.55□□□□□ -1.52
CDH9-203ENST00000505045 EGFL7Q9UHF1 273 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 PCDHA6Q9UN73 950 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 PCDHA8Q9Y5H6 950 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 UBIAD1Q9Y5Z9 338 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 SLC4A7Q9Y6M7 1214 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 GSTTP1A0A1W2PQM5 241 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 H3BRJ5 948 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 PDE2AO00408 941 aaPredicted RBP5.55□□□□□ -1.52
CDH9-203ENST00000505045 NOP56O00567 594 aaKnown RBP5.55□□□□□ -1.52
CDH9-203ENST00000505045 PPFIA4O75335 1185 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 CXCL10P02778 98 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 PFKMP08237 780 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 ARP10275 920 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 RPS6KB1P23443 525 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 METAP2P50579 478 aaKnown RBP eCLIP5.55□□□□□ -1.52
CDH9-203ENST00000505045 ADAM17P78536 824 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 ITGB3BPQ13352 177 aaPredicted RBP5.55□□□□□ -1.52
CDH9-203ENST00000505045 BFSP2Q13515 415 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 MTMR1Q13613 665 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 TOB2Q14106 344 aaPredicted RBP5.55□□□□□ -1.52
CDH9-203ENST00000505045 NTRK3Q16288 839 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 RUFY4Q6ZNE9 571 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 TMTC2Q8N394 836 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 CAGE1Q8TC20 777 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 RASGRP4Q8TDF6 673 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 CRYGNQ8WXF5 182 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 FOXD4L4Q8WXT5 416 aaPredicted RBP5.55□□□□□ -1.52
CDH9-203ENST00000505045 CUL5Q93034 780 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 NXPE3Q969Y0 559 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 KLHDC7BQ96G42 594 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 PCYT2Q99447 389 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 ANO3Q9BYT9 981 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 AGXT2Q9BYV1 514 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 UPF3BQ9BZI7 483 aaKnown RBP5.55□□□□□ -1.52
CDH9-203ENST00000505045 FTOQ9C0B1 505 aaKnown RBP eCLIP5.55□□□□□ -1.52
CDH9-203ENST00000505045 OSGEPQ9NPF4 335 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 SETD4Q9NVD3 440 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 BARHL2Q9NY43 387 aa5.55□□□□□ -1.52
CDH9-203ENST00000505045 FOXD3Q9UJU5 478 aaPredicted RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms