RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, human

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP46-205	ENST00000504078	PLCB4	Q15147	1175 aa		4.17	□□□□□ -1.74
USP46-205	ENST00000504078	LPAL2	Q16609	132 aa		4.17	□□□□□ -1.74
USP46-205	ENST00000504078	GNPTAB	Q3T906	1256 aa		4.17	□□□□□ -1.74
USP46-205	ENST00000504078	KIAA1841	Q6NSI8	718 aa		4.17	□□□□□ -1.74
USP46-205	ENST00000504078	CES5A	Q6NT32	575 aa		4.17	□□□□□ -1.74
USP46-205	ENST00000504078	TAF2	Q6P1X5	1199 aa		4.17	□□□□□ -1.74
USP46-205	ENST00000504078	USP17L6P	Q6QN14	398 aa		4.17	□□□□□ -1.74
USP46-205	ENST00000504078	MFSD6	Q6ZSS7	791 aa		4.17	□□□□□ -1.74
USP46-205	ENST00000504078	C8orf86	Q6ZUL3	223 aa		4.17	□□□□□ -1.74
USP46-205	ENST00000504078	TMC7	Q7Z402	723 aa		4.17	□□□□□ -1.74
USP46-205	ENST00000504078	RSPH3	Q86UC2	560 aa		4.17	□□□□□ -1.74
USP46-205	ENST00000504078	VSIG10L	Q86VR7	867 aa		4.17	□□□□□ -1.74
USP46-205	ENST00000504078	UBALD2	Q8IYN6	164 aa		4.17	□□□□□ -1.74
USP46-205	ENST00000504078	BCL7C	Q8WUZ0	217 aa	Predicted RBP	4.17	□□□□□ -1.74
USP46-205	ENST00000504078	MRPS27	Q92552	414 aa	Known RBP	4.17	□□□□□ -1.74
USP46-205	ENST00000504078	CASP10	Q92851	521 aa		4.17	□□□□□ -1.74
USP46-205	ENST00000504078	ZNF558	Q96NG5	402 aa		4.17	□□□□□ -1.74
USP46-205	ENST00000504078	PCYT2	Q99447	389 aa		4.17	□□□□□ -1.74
USP46-205	ENST00000504078	ADAM2	Q99965	735 aa		4.17	□□□□□ -1.74
USP46-205	ENST00000504078	MYL10	Q9BUA6	226 aa		4.17	□□□□□ -1.74
USP46-205	ENST00000504078	AMN	Q9BXJ7	453 aa		4.17	□□□□□ -1.74
USP46-205	ENST00000504078	KRTAP4-11	Q9BYQ6	195 aa		4.17	□□□□□ -1.74
USP46-205	ENST00000504078	ADAM7	Q9H2U9	754 aa		4.17	□□□□□ -1.74
USP46-205	ENST00000504078	CWH43	Q9H720	699 aa		4.17	□□□□□ -1.74
USP46-205	ENST00000504078	TBC1D17	Q9HA65	648 aa		4.17	□□□□□ -1.74
USP46-205	ENST00000504078	TCP11L1	Q9NUJ3	509 aa		4.17	□□□□□ -1.74
USP46-205	ENST00000504078	RNF19A	Q9NV58	838 aa		4.17	□□□□□ -1.74
USP46-205	ENST00000504078	NCDN	Q9UBB6	729 aa		4.17	□□□□□ -1.74
USP46-205	ENST00000504078	USP18	Q9UMW8	372 aa		4.17	□□□□□ -1.74
USP46-205	ENST00000504078	NOC2L	Q9Y3T9	749 aa	Known RBP	4.17	□□□□□ -1.74
USP46-205	ENST00000504078	PCDHB7	Q9Y5E2	793 aa		4.17	□□□□□ -1.74
USP46-205	ENST00000504078	FRMPD4	Q14CM0	1322 aa		4.17	□□□□□ -1.74
USP46-205	ENST00000504078	NRCAM	Q92823	1304 aa		4.17	□□□□□ -1.74
USP46-205	ENST00000504078	IGSF9B	Q9UPX0	1349 aa		4.17	□□□□□ -1.74
USP46-205	ENST00000504078	PATJ	Q8NI35	1801 aa		4.16	□□□□□ -1.74
USP46-205	ENST00000504078	GSTTP1	A0A1W2PQM5	241 aa		4.16	□□□□□ -1.74
USP46-205	ENST00000504078	hCG_1642624	A0A1W2PR95	340 aa		4.16	□□□□□ -1.74
USP46-205	ENST00000504078	MBLAC1	A4D2B0	266 aa	Predicted RBP	4.16	□□□□□ -1.74
USP46-205	ENST00000504078	C2orf71	A6NGG8	1288 aa		4.16	□□□□□ -1.74
USP46-205	ENST00000504078	KLRF2	D3W0D1	207 aa		4.16	□□□□□ -1.74
USP46-205	ENST00000504078	CDK2AP1	O14519	115 aa		4.16	□□□□□ -1.74
USP46-205	ENST00000504078	ZBTB5	O15062	677 aa		4.16	□□□□□ -1.74
USP46-205	ENST00000504078	CYTH3	O43739	400 aa		4.16	□□□□□ -1.74
USP46-205	ENST00000504078	N4BP1	O75113	896 aa	Known RBP	4.16	□□□□□ -1.74
USP46-205	ENST00000504078	ZC3H11A	O75152	810 aa	Known RBP eCLIP	4.16	□□□□□ -1.74
USP46-205	ENST00000504078	EOMES	O95936	686 aa		4.16	□□□□□ -1.74
USP46-205	ENST00000504078	INSRR	P14616	1297 aa		4.16	□□□□□ -1.74
USP46-205	ENST00000504078	KCNA2	P16389	499 aa		4.16	□□□□□ -1.74
USP46-205	ENST00000504078	SSTR4	P31391	388 aa		4.16	□□□□□ -1.74
USP46-205	ENST00000504078	GBP2	P32456	591 aa	Predicted RBP	4.16	□□□□□ -1.74
USP46-205	ENST00000504078	CLCN3	P51790	818 aa		4.16	□□□□□ -1.74
USP46-205	ENST00000504078	GP2	P55259	537 aa	Known RBP	4.16	□□□□□ -1.74
USP46-205	ENST00000504078	NEDD9	Q14511	834 aa		4.16	□□□□□ -1.74
USP46-205	ENST00000504078	SMC1A	Q14683	1233 aa	Known RBP	4.16	□□□□□ -1.74
USP46-205	ENST00000504078	KIZ	Q2M2Z5	673 aa		4.16	□□□□□ -1.74
USP46-205	ENST00000504078	CLLU1OS	Q5K130	101 aa		4.16	□□□□□ -1.74
USP46-205	ENST00000504078	IFIT1B	Q5T764	474 aa	Known RBP	4.16	□□□□□ -1.74
USP46-205	ENST00000504078	XRRA1	Q6P2D8	792 aa		4.16	□□□□□ -1.74
USP46-205	ENST00000504078	TSSK4	Q6SA08	328 aa		4.16	□□□□□ -1.74
USP46-205	ENST00000504078	KCNT2	Q6UVM3	1135 aa		4.16	□□□□□ -1.74
USP46-205	ENST00000504078	LRRC55	Q6ZSA7	311 aa		4.16	□□□□□ -1.74
USP46-205	ENST00000504078	CCDC149	Q6ZUS6	474 aa		4.16	□□□□□ -1.74
USP46-205	ENST00000504078	STOX1	Q6ZVD7	989 aa		4.16	□□□□□ -1.74
USP46-205	ENST00000504078	CYB5R4	Q7L1T6	521 aa		4.16	□□□□□ -1.74
USP46-205	ENST00000504078	GET4	Q7L5D6	327 aa	Predicted RBP	4.16	□□□□□ -1.74
USP46-205	ENST00000504078	FAM228A	Q86W67	206 aa		4.16	□□□□□ -1.74
USP46-205	ENST00000504078	LRRC43	Q8N309	656 aa		4.16	□□□□□ -1.74
USP46-205	ENST00000504078	RGS22	Q8NE09	1264 aa		4.16	□□□□□ -1.74
USP46-205	ENST00000504078	HELQ	Q8TDG4	1101 aa		4.16	□□□□□ -1.74
USP46-205	ENST00000504078	ESR2	Q92731	530 aa		4.16	□□□□□ -1.74
USP46-205	ENST00000504078	RILPL2	Q969X0	211 aa		4.16	□□□□□ -1.74
USP46-205	ENST00000504078	CHAMP1	Q96JM3	812 aa		4.16	□□□□□ -1.74
USP46-205	ENST00000504078	INPP4A	Q96PE3	977 aa	Predicted RBP	4.16	□□□□□ -1.74
USP46-205	ENST00000504078	CDCA3	Q99618	268 aa	Predicted RBP	4.16	□□□□□ -1.74
USP46-205	ENST00000504078	USP26	Q9BXU7	913 aa		4.16	□□□□□ -1.74
USP46-205	ENST00000504078	GBP3	Q9H0R5	595 aa		4.16	□□□□□ -1.74
USP46-205	ENST00000504078	ATP6V0A4	Q9HBG4	840 aa		4.16	□□□□□ -1.74
USP46-205	ENST00000504078	SERTAD1	Q9UHV2	236 aa		4.16	□□□□□ -1.74
USP46-205	ENST00000504078	MAD2L2	Q9UI95	211 aa		4.16	□□□□□ -1.74
USP46-205	ENST00000504078	PNMA2	Q9UL42	364 aa		4.16	□□□□□ -1.74
USP46-205	ENST00000504078	DUSP12	Q9UNI6	340 aa		4.16	□□□□□ -1.74
USP46-205	ENST00000504078	SMG5	Q9UPR3	1016 aa	Known RBP	4.16	□□□□□ -1.74
USP46-205	ENST00000504078	INPP5F	Q9Y2H2	1132 aa		4.16	□□□□□ -1.74
USP46-205	ENST00000504078	OAS3	Q9Y6K5	1087 aa	Known RBP	4.16	□□□□□ -1.74
USP46-205	ENST00000504078	TTC41P	Q6P2S7	1318 aa		4.16	□□□□□ -1.74
USP46-205	ENST00000504078		A6NJY4	79 aa		4.15	□□□□□ -1.75
USP46-205	ENST00000504078	MEIS3P2	A8K0S8	358 aa		4.15	□□□□□ -1.75
USP46-205	ENST00000504078		C9IYK1	514 aa		4.15	□□□□□ -1.75
USP46-205	ENST00000504078	B4GALT3	O60512	393 aa		4.15	□□□□□ -1.75
USP46-205	ENST00000504078	CSDE1	O75534	798 aa	Known RBP	4.15	□□□□□ -1.75
USP46-205	ENST00000504078	RPS6KA5	O75582	802 aa		4.15	□□□□□ -1.75
USP46-205	ENST00000504078	PLEKHA8P1	O95397	391 aa		4.15	□□□□□ -1.75
USP46-205	ENST00000504078	FGR	P09769	529 aa		4.15	□□□□□ -1.75
USP46-205	ENST00000504078	SP9	P0CG40	484 aa		4.15	□□□□□ -1.75
USP46-205	ENST00000504078	GLUL	P15104	373 aa		4.15	□□□□□ -1.75
USP46-205	ENST00000504078	ITGB5	P18084	799 aa		4.15	□□□□□ -1.75
USP46-205	ENST00000504078	RXRA	P19793	462 aa		4.15	□□□□□ -1.75
USP46-205	ENST00000504078	ADH7	P40394	386 aa		4.15	□□□□□ -1.75
USP46-205	ENST00000504078	MTHFR	P42898	656 aa		4.15	□□□□□ -1.75
USP46-205	ENST00000504078	CLCN5	P51795	746 aa		4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms