RNA–Protein interactions for RNA: ENST00000498124.1

CDKN2A-208, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 880 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-208ENST00000498124 SPATA31C1P0DKV0 1188 aa25.07■■□□□ 1.6
CDKN2A-208ENST00000498124 ITIH3Q06033 890 aa25.07■■□□□ 1.6
CDKN2A-208ENST00000498124 POU5F1BQ06416 359 aa25.07■■□□□ 1.6
CDKN2A-208ENST00000498124 PCBP1Q15365 356 aaKnown RBP eCLIP25.07■■□□□ 1.6
CDKN2A-208ENST00000498124 PTPN21Q16825 1174 aa25.07■■□□□ 1.6
CDKN2A-208ENST00000498124 KANK3Q6NY19 840 aa25.07■■□□□ 1.6
CDKN2A-208ENST00000498124 C12orf76Q8N812 135 aaPredicted RBP25.07■■□□□ 1.6
CDKN2A-208ENST00000498124 PIGOQ8TEQ8 1089 aa25.07■■□□□ 1.6
CDKN2A-208ENST00000498124 CCDC51Q96ER9 411 aa25.07■■□□□ 1.6
CDKN2A-208ENST00000498124 MFSD14AQ96MC6 490 aa25.07■■□□□ 1.6
CDKN2A-208ENST00000498124 FBXL18Q96ME1 805 aa25.07■■□□□ 1.6
CDKN2A-208ENST00000498124 TMEM175Q9BSA9 504 aa25.07■■□□□ 1.6
CDKN2A-208ENST00000498124 KMT2EQ8IZD2 1858 aa25.06■■□□□ 1.6
CDKN2A-208ENST00000498124 WEE2P0C1S8 567 aa25.06■■□□□ 1.6
CDKN2A-208ENST00000498124 GUCY1B3Q02153 619 aa25.06■■□□□ 1.6
CDKN2A-208ENST00000498124 GIT2Q14161 759 aa25.06■■□□□ 1.6
CDKN2A-208ENST00000498124 NOTUMQ6P988 496 aa25.06■■□□□ 1.6
CDKN2A-208ENST00000498124 NFKBIZQ9BYH8 718 aa25.06■■□□□ 1.6
CDKN2A-208ENST00000498124 DZANK1Q9NVP4 752 aa25.06■■□□□ 1.6
CDKN2A-208ENST00000498124 HES2Q9Y543 173 aa25.06■■□□□ 1.6
CDKN2A-208ENST00000498124 INO80B-WBP1J3KQ70 363 aa25.05■■□□□ 1.6
CDKN2A-208ENST00000498124 LILRB3O75022 631 aa25.05■■□□□ 1.6
CDKN2A-208ENST00000498124 EFEMP2O95967 443 aa25.05■■□□□ 1.6
CDKN2A-208ENST00000498124 ARF4P18085 180 aaPredicted RBP25.05■■□□□ 1.6
CDKN2A-208ENST00000498124 AXLP30530 894 aa25.05■■□□□ 1.6
CDKN2A-208ENST00000498124 TFDP1Q14186 410 aa25.05■■□□□ 1.6
CDKN2A-208ENST00000498124 BMS1Q14692 1282 aaKnown RBP25.05■■□□□ 1.6
CDKN2A-208ENST00000498124 RARS2Q5T160 578 aaKnown RBP25.05■■□□□ 1.6
CDKN2A-208ENST00000498124 CNNM3Q8NE01 707 aa25.05■■□□□ 1.6
CDKN2A-208ENST00000498124 ASIC4Q96FT7 647 aa25.05■■□□□ 1.6
CDKN2A-208ENST00000498124 NECTIN4Q96NY8 510 aa25.05■■□□□ 1.6
CDKN2A-208ENST00000498124 CSRNP2Q9H175 543 aa25.05■■□□□ 1.6
CDKN2A-208ENST00000498124 POLR3FQ9H1D9 316 aaPredicted RBP25.05■■□□□ 1.6
CDKN2A-208ENST00000498124 KCNH6Q9H252 994 aa25.05■■□□□ 1.6
CDKN2A-208ENST00000498124 KANSL3Q9P2N6 904 aa25.05■■□□□ 1.6
CDKN2A-208ENST00000498124 ARL5CA6NH57 179 aa25.04■■□□□ 1.6
CDKN2A-208ENST00000498124 C2CD4DB7Z1M9 353 aa25.04■■□□□ 1.6
CDKN2A-208ENST00000498124 NRP1O14786 923 aa25.04■■□□□ 1.6
CDKN2A-208ENST00000498124 B4GALT5O43286 388 aa25.04■■□□□ 1.6
CDKN2A-208ENST00000498124 ITGA4P13612 1032 aa25.04■■□□□ 1.6
CDKN2A-208ENST00000498124 MCM7P33993 719 aa25.04■■□□□ 1.6
CDKN2A-208ENST00000498124 MLH1P40692 756 aa25.04■■□□□ 1.6
CDKN2A-208ENST00000498124 DSC1Q08554 894 aa25.04■■□□□ 1.6
CDKN2A-208ENST00000498124 SIGLEC14Q08ET2 396 aa25.04■■□□□ 1.6
CDKN2A-208ENST00000498124 CES5AQ6NT32 575 aa25.04■■□□□ 1.6
CDKN2A-208ENST00000498124 COLGALT2Q8IYK4 626 aa25.04■■□□□ 1.6
CDKN2A-208ENST00000498124 ZFP42Q96MM3 310 aa25.04■■□□□ 1.6
CDKN2A-208ENST00000498124 GAD1Q99259 594 aa25.04■■□□□ 1.6
CDKN2A-208ENST00000498124 NXF3Q9H4D5 531 aaKnown RBP25.04■■□□□ 1.6
CDKN2A-208ENST00000498124 GPRC5CQ9NQ84 441 aa25.04■■□□□ 1.6
CDKN2A-208ENST00000498124 MIOSQ9NXC5 875 aa25.04■■□□□ 1.6
CDKN2A-208ENST00000498124 USO1O60763 962 aaKnown RBP25.03■■□□□ 1.6
CDKN2A-208ENST00000498124 MED24O75448 989 aa25.03■■□□□ 1.6
CDKN2A-208ENST00000498124 HSP90AA1P07900 732 aaKnown RBP25.03■■□□□ 1.6
CDKN2A-208ENST00000498124 ATP2B1P20020 1258 aa25.03■■□□□ 1.6
CDKN2A-208ENST00000498124 NHLH1Q02575 133 aa25.03■■□□□ 1.6
CDKN2A-208ENST00000498124 KIAA1841Q6NSI8 718 aa25.03■■□□□ 1.6
CDKN2A-208ENST00000498124 CATSPER3Q86XQ3 398 aa25.03■■□□□ 1.6
CDKN2A-208ENST00000498124 RNF168Q8IYW5 571 aaPredicted RBP25.03■■□□□ 1.6
CDKN2A-208ENST00000498124 PBXIP1Q96AQ6 731 aa25.03■■□□□ 1.6
CDKN2A-208ENST00000498124 KLHL5Q96PQ7 755 aa25.03■■□□□ 1.6
CDKN2A-208ENST00000498124 UBN1Q9NPG3 1134 aa25.03■■□□□ 1.6
CDKN2A-208ENST00000498124 TSHZ2Q9NRE2 1034 aa25.03■■□□□ 1.6
CDKN2A-208ENST00000498124 FAN1Q9Y2M0 1017 aa25.03■■□□□ 1.6
CDKN2A-208ENST00000498124 F8W810 466 aa25.02■■□□□ 1.6
CDKN2A-208ENST00000498124 H3BQV1 296 aa25.02■■□□□ 1.6
CDKN2A-208ENST00000498124 ALDH2P05091 517 aa25.02■■□□□ 1.6
CDKN2A-208ENST00000498124 SSBP05455 408 aaKnown RBP eCLIP25.02■■□□□ 1.6
CDKN2A-208ENST00000498124 CNPP09543 421 aaKnown RBP25.02■■□□□ 1.6
CDKN2A-208ENST00000498124 XRCC6P12956 609 aaKnown RBP eCLIP25.02■■□□□ 1.6
CDKN2A-208ENST00000498124 PDCP20941 246 aa25.02■■□□□ 1.6
CDKN2A-208ENST00000498124 MTHFRP42898 656 aa25.02■■□□□ 1.6
CDKN2A-208ENST00000498124 SCNN1GP51170 649 aa25.02■■□□□ 1.6
CDKN2A-208ENST00000498124 LARP1BQ659C4 914 aaKnown RBP25.02■■□□□ 1.6
CDKN2A-208ENST00000498124 GSTCDQ8NEC7 633 aa25.02■■□□□ 1.6
CDKN2A-208ENST00000498124 CCDC43Q96MW1 224 aaKnown RBP25.02■■□□□ 1.6
CDKN2A-208ENST00000498124 FAM193BQ96PV7 902 aaPredicted RBP25.02■■□□□ 1.6
CDKN2A-208ENST00000498124 FOXP1Q9H334 677 aaPredicted RBP25.02■■□□□ 1.6
CDKN2A-208ENST00000498124 TUFT1Q9NNX1 390 aa25.02■■□□□ 1.6
CDKN2A-208ENST00000498124 PRG3Q9Y2Y8 225 aaPredicted RBP25.02■■□□□ 1.6
CDKN2A-208ENST00000498124 NR2E1Q9Y466 385 aa25.02■■□□□ 1.6
CDKN2A-208ENST00000498124 TDRD15B5MCY1 1934 aaKnown RBP25.02■■□□□ 1.6
CDKN2A-208ENST00000498124 CLCN4P51793 760 aa25.01■■□□□ 1.59
CDKN2A-208ENST00000498124 GNL2Q13823 731 aaKnown RBP25.01■■□□□ 1.59
CDKN2A-208ENST00000498124 TAS1R1Q7RTX1 841 aa25.01■■□□□ 1.59
CDKN2A-208ENST00000498124 CDR2LQ86X02 465 aaPredicted RBP25.01■■□□□ 1.59
CDKN2A-208ENST00000498124 RIPOR3Q96MK2 946 aa25.01■■□□□ 1.59
CDKN2A-208ENST00000498124 HERC2P3Q9BVR0 1158 aa25.01■■□□□ 1.59
CDKN2A-208ENST00000498124 STK39Q9UEW8 545 aa25.01■■□□□ 1.59
CDKN2A-208ENST00000498124 PLXNA3P51805 1871 aa25■■□□□ 1.59
CDKN2A-208ENST00000498124 SOD2P04179 222 aa25■■□□□ 1.59
CDKN2A-208ENST00000498124 BECN1Q14457 450 aa25■■□□□ 1.59
CDKN2A-208ENST00000498124 IER5LQ5T953 404 aa25■■□□□ 1.59
CDKN2A-208ENST00000498124 CDCA2Q69YH5 1023 aaPredicted RBP25■■□□□ 1.59
CDKN2A-208ENST00000498124 POTEGQ6S5H5 508 aa25■■□□□ 1.59
CDKN2A-208ENST00000498124 PPFIBP1Q86W92 1011 aa25■■□□□ 1.59
CDKN2A-208ENST00000498124 TMEM87AQ8NBN3 555 aa25■■□□□ 1.59
CDKN2A-208ENST00000498124 PRSS33Q8NF86 280 aa25■■□□□ 1.59
CDKN2A-208ENST00000498124 POLR3CQ9BUI4 534 aaPredicted RBP25■■□□□ 1.59
CDKN2A-208ENST00000498124 APOL6Q9BWW8 343 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms